RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 PDE6HQ13956 83 aa9.7□□□□□ -0.86
HIF3A-201ENST00000244302 GDF5OSQ5U4N7 250 aa9.7□□□□□ -0.86
HIF3A-201ENST00000244302 Q8TAT8 98 aa9.7□□□□□ -0.86
HIF3A-201ENST00000244302 ZFP30Q9Y2G7 519 aa9.7□□□□□ -0.86
HIF3A-201ENST00000244302 MRPS16Q9Y3D3 137 aaKnown RBP9.7□□□□□ -0.86
HIF3A-201ENST00000244302 M0R2Z0 102 aa9.7□□□□□ -0.86
HIF3A-201ENST00000244302 LTAP01374 205 aa9.7□□□□□ -0.86
HIF3A-201ENST00000244302 LINC00322Q6ZN03 302 aaPredicted RBP9.7□□□□□ -0.86
HIF3A-201ENST00000244302 Q6ZN92 141 aa9.7□□□□□ -0.86
HIF3A-201ENST00000244302 PRNTQ86SH4 94 aa9.7□□□□□ -0.86
HIF3A-201ENST00000244302 FAM19A2Q8N3H0 131 aa9.7□□□□□ -0.86
HIF3A-201ENST00000244302 DCANP1Q8TF63 244 aa9.7□□□□□ -0.86
HIF3A-201ENST00000244302 TRAV9-2A0A087WT02 112 aa9.69□□□□□ -0.86
HIF3A-201ENST00000244302 TMEM61Q8N0U2 210 aa9.69□□□□□ -0.86
HIF3A-201ENST00000244302 CHCHD1Q96BP2 118 aaKnown RBP9.69□□□□□ -0.86
HIF3A-201ENST00000244302 AAMDCQ9H7C9 122 aa9.69□□□□□ -0.86
HIF3A-201ENST00000244302 LAMTOR2Q9Y2Q5 125 aa9.69□□□□□ -0.86
HIF3A-201ENST00000244302 TRBV6-1A0A0K0K1D8 114 aa9.68□□□□□ -0.86
HIF3A-201ENST00000244302 C19orf71A6NCJ1 209 aa9.68□□□□□ -0.86
HIF3A-201ENST00000244302 P01737 135 aa9.68□□□□□ -0.86
HIF3A-201ENST00000244302 PSG9Q00887 426 aa9.68□□□□□ -0.86
HIF3A-201ENST00000244302 BATFQ16520 125 aa9.68□□□□□ -0.86
HIF3A-201ENST00000244302 CD300EQ496F6 205 aaPredicted RBP9.68□□□□□ -0.86
HIF3A-201ENST00000244302 LYPD1Q8N2G4 141 aa9.68□□□□□ -0.86
HIF3A-201ENST00000244302 RNF24Q9Y225 148 aa9.68□□□□□ -0.86
HIF3A-201ENST00000244302 OVOL1O14753 267 aa9.68□□□□□ -0.86
HIF3A-201ENST00000244302 ZNF688P0C7X2 276 aa9.68□□□□□ -0.86
HIF3A-201ENST00000244302 RNASEKQ6P5S7 137 aaKnown RBP9.68□□□□□ -0.86
HIF3A-201ENST00000244302 Q6ZQT7 251 aa9.68□□□□□ -0.86
HIF3A-201ENST00000244302 RBPMS2Q6ZRY4 209 aaKnown RBP9.68□□□□□ -0.86
HIF3A-201ENST00000244302 C8orf49Q96NF6 230 aa9.68□□□□□ -0.86
HIF3A-201ENST00000244302 CITED1Q99966 193 aa9.68□□□□□ -0.86
HIF3A-201ENST00000244302 NPIPB6E9PJ23 425 aa9.67□□□□□ -0.86
HIF3A-201ENST00000244302 DEFB114Q30KQ6 69 aa9.67□□□□□ -0.86
HIF3A-201ENST00000244302 DAZAP1Q96EP5 407 aaKnown RBP9.67□□□□□ -0.86
HIF3A-201ENST00000244302 CRXO43186 299 aaPredicted RBP9.67□□□□□ -0.86
HIF3A-201ENST00000244302 S100A7P31151 101 aa9.67□□□□□ -0.86
HIF3A-201ENST00000244302 CAMPP49913 170 aa9.67□□□□□ -0.86
HIF3A-201ENST00000244302 PSG3Q16557 428 aa9.67□□□□□ -0.86
HIF3A-201ENST00000244302 NDUFA11Q86Y39 141 aa9.67□□□□□ -0.86
HIF3A-201ENST00000244302 PSG8Q9UQ74 426 aa9.67□□□□□ -0.86
HIF3A-201ENST00000244302 TSPOP30536 169 aa9.66□□□□□ -0.86
HIF3A-201ENST00000244302 EBLN2Q6P2I7 272 aa9.66□□□□□ -0.86
HIF3A-201ENST00000244302 ZNF738Q8NE65 137 aa9.66□□□□□ -0.86
HIF3A-201ENST00000244302 ORAOV1Q8WV07 137 aa9.66□□□□□ -0.86
HIF3A-201ENST00000244302 TMEM70Q9BUB7 260 aa9.66□□□□□ -0.86
HIF3A-201ENST00000244302 AGPAT4-IT1Q9H0P7 198 aa9.66□□□□□ -0.86
HIF3A-201ENST00000244302 PEMTQ9UBM1 199 aa9.66□□□□□ -0.86
HIF3A-201ENST00000244302 NPSP0C0P6 89 aa9.65□□□□□ -0.86
HIF3A-201ENST00000244302 OR5AL1P0C617 328 aa9.65□□□□□ -0.86
HIF3A-201ENST00000244302 KIR3DS1Q14943 382 aa9.65□□□□□ -0.86
HIF3A-201ENST00000244302 Q86TA4 180 aa9.65□□□□□ -0.86
HIF3A-201ENST00000244302 OR2D3Q8NGH3 330 aa9.65□□□□□ -0.86
HIF3A-201ENST00000244302 SLC50A1Q9BRV3 221 aa9.65□□□□□ -0.86
HIF3A-201ENST00000244302 NDFIP1Q9BT67 221 aa9.65□□□□□ -0.86
HIF3A-201ENST00000244302 CSN1S1P47710 185 aa9.65□□□□□ -0.86
HIF3A-201ENST00000244302 CRIP1P50238 77 aa9.65□□□□□ -0.86
HIF3A-201ENST00000244302 PSMG4Q5JS54 123 aa9.65□□□□□ -0.86
HIF3A-201ENST00000244302 SSBP4Q9BWG4 385 aaPredicted RBP9.65□□□□□ -0.86
HIF3A-201ENST00000244302 ST20Q9HBF5 79 aa9.65□□□□□ -0.86
HIF3A-201ENST00000244302 J3KRW8 73 aa9.64□□□□□ -0.87
HIF3A-201ENST00000244302 K7EQG2 157 aa9.64□□□□□ -0.87
HIF3A-201ENST00000244302 SAP30O75446 220 aa9.64□□□□□ -0.87
HIF3A-201ENST00000244302 DYNLRB2Q8TF09 96 aa9.64□□□□□ -0.87
HIF3A-201ENST00000244302 GTSF1Q8WW33 167 aa9.64□□□□□ -0.87
HIF3A-201ENST00000244302 ANK2Q01484 3957 aa9.64□□□□□ -0.87
HIF3A-201ENST00000244302 IGKV3-20P01619 116 aa9.64□□□□□ -0.87
HIF3A-201ENST00000244302 ZNF80P51504 273 aaPredicted RBP9.64□□□□□ -0.87
HIF3A-201ENST00000244302 FOXA3P55318 350 aaPredicted RBP9.64□□□□□ -0.87
HIF3A-201ENST00000244302 STPG4Q8N801 248 aa9.64□□□□□ -0.87
HIF3A-201ENST00000244302 LINC00482Q8N8I6 264 aa9.64□□□□□ -0.87
HIF3A-201ENST00000244302 ZC2HC1AQ96GY0 325 aa9.64□□□□□ -0.87
HIF3A-201ENST00000244302 A0A1B0GW15 77 aa9.63□□□□□ -0.87
HIF3A-201ENST00000244302 M0QZ24 198 aa9.63□□□□□ -0.87
HIF3A-201ENST00000244302 PF4P02776 101 aa9.63□□□□□ -0.87
HIF3A-201ENST00000244302 TMEM75Q8N9X5 138 aa9.63□□□□□ -0.87
HIF3A-201ENST00000244302 GATD1Q8NB37 220 aa9.63□□□□□ -0.87
HIF3A-201ENST00000244302 URB1-AS1Q96HZ7 61 aa9.63□□□□□ -0.87
HIF3A-201ENST00000244302 PGLYRP4Q96LB8 373 aa9.63□□□□□ -0.87
HIF3A-201ENST00000244302 LOC102724200A0A096LPH7 203 aaPredicted RBP9.62□□□□□ -0.87
HIF3A-201ENST00000244302 APRG1Q8IVJ8 170 aa9.62□□□□□ -0.87
HIF3A-201ENST00000244302 IGHV1-24A0A0C4DH33 117 aa9.62□□□□□ -0.87
HIF3A-201ENST00000244302 CT45A10P0DMU9 189 aa9.62□□□□□ -0.87
HIF3A-201ENST00000244302 HIST1H1AQ02539 215 aaPredicted RBP9.62□□□□□ -0.87
HIF3A-201ENST00000244302 ATOH7Q8N100 152 aa9.62□□□□□ -0.87
HIF3A-201ENST00000244302 PRR25Q96S07 402 aa9.62□□□□□ -0.87
HIF3A-201ENST00000244302 ZNF256Q9Y2P7 627 aaPredicted RBP9.62□□□□□ -0.87
HIF3A-201ENST00000244302 KNCNA6PVL3 124 aa9.61□□□□□ -0.87
HIF3A-201ENST00000244302 SYS1-DBNDD2H3BUS1 97 aa9.61□□□□□ -0.87
HIF3A-201ENST00000244302 K7EQM0 130 aa9.61□□□□□ -0.87
HIF3A-201ENST00000244302 LEPROTL1O95214 131 aa9.61□□□□□ -0.87
HIF3A-201ENST00000244302 IGLL1P15814 213 aa9.61□□□□□ -0.87
HIF3A-201ENST00000244302 PRR9Q5T870 116 aa9.61□□□□□ -0.87
HIF3A-201ENST00000244302 Q6AWC8 147 aa9.61□□□□□ -0.87
HIF3A-201ENST00000244302 TMEM191AQ9H0A3 160 aa9.61□□□□□ -0.87
HIF3A-201ENST00000244302 OR4C46A6NHA9 309 aa9.61□□□□□ -0.87
HIF3A-201ENST00000244302 DEFB131AP59861 70 aa9.61□□□□□ -0.87
HIF3A-201ENST00000244302 RIGQ13278 110 aa9.61□□□□□ -0.87
HIF3A-201ENST00000244302 PRR31Q5SQ13 230 aa9.61□□□□□ -0.87
HIF3A-201ENST00000244302 PET117Q6UWS5 81 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms