RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 IGLV1-40P01703 118 aa9.66□□□□□ -0.86
SNAI1-201ENST00000244050 IFI27P40305 119 aaPredicted RBP9.66□□□□□ -0.86
SNAI1-201ENST00000244050 HNRNPA3P51991 378 aaKnown RBP9.66□□□□□ -0.86
SNAI1-201ENST00000244050 TMEM95Q3KNT9 176 aa9.66□□□□□ -0.86
SNAI1-201ENST00000244050 UNQ9165/PRO28630Q6UXU0 137 aa9.66□□□□□ -0.86
SNAI1-201ENST00000244050 C16orf92Q96LL3 132 aa9.66□□□□□ -0.86
SNAI1-201ENST00000244050 ZNF747Q9BV97 191 aa9.66□□□□□ -0.86
SNAI1-201ENST00000244050 ST20Q9HBF5 79 aa9.66□□□□□ -0.86
SNAI1-201ENST00000244050 MRPS16Q9Y3D3 137 aaKnown RBP9.66□□□□□ -0.86
SNAI1-201ENST00000244050 IGKV3D-20A0A0C4DH25 116 aa9.65□□□□□ -0.86
SNAI1-201ENST00000244050 MUC21A0A0G2JKD1 596 aa9.65□□□□□ -0.86
SNAI1-201ENST00000244050 A0A0G2JLM5 398 aa9.65□□□□□ -0.86
SNAI1-201ENST00000244050 MUC21A0A140T8X8 626 aa9.65□□□□□ -0.86
SNAI1-201ENST00000244050 TRBV12-3P01733 135 aa9.65□□□□□ -0.86
SNAI1-201ENST00000244050 PPBPP02775 128 aa9.65□□□□□ -0.86
SNAI1-201ENST00000244050 RPLP1P05386 114 aaKnown RBP9.65□□□□□ -0.86
SNAI1-201ENST00000244050 MUC21Q5SSG8 566 aa9.65□□□□□ -0.86
SNAI1-201ENST00000244050 LINC01545Q5VT33 79 aa9.65□□□□□ -0.86
SNAI1-201ENST00000244050 TCAPO15273 167 aa9.64□□□□□ -0.87
SNAI1-201ENST00000244050 TSPOP30536 169 aa9.64□□□□□ -0.87
SNAI1-201ENST00000244050 CKS2P33552 79 aa9.64□□□□□ -0.87
SNAI1-201ENST00000244050 CFHR3Q02985 330 aa9.64□□□□□ -0.87
SNAI1-201ENST00000244050 GPHB5Q86YW7 130 aa9.64□□□□□ -0.87
SNAI1-201ENST00000244050 OR4X2Q8NGF9 303 aa9.64□□□□□ -0.87
SNAI1-201ENST00000244050 RNF185Q96GF1 192 aa9.64□□□□□ -0.87
SNAI1-201ENST00000244050 LINC00477Q96M19 166 aa9.64□□□□□ -0.87
SNAI1-201ENST00000244050 KLK15Q9H2R5 256 aa9.64□□□□□ -0.87
SNAI1-201ENST00000244050 YAE1D1Q9NRH1 226 aa9.64□□□□□ -0.87
SNAI1-201ENST00000244050 LAMTOR2Q9Y2Q5 125 aa9.64□□□□□ -0.87
SNAI1-201ENST00000244050 A0A096LNJ9 63 aa9.64□□□□□ -0.87
SNAI1-201ENST00000244050 SOCS3O14543 225 aa9.64□□□□□ -0.87
SNAI1-201ENST00000244050 C20orf173Q96LM9 149 aa9.64□□□□□ -0.87
SNAI1-201ENST00000244050 NPFFR1Q9GZQ6 430 aa9.64□□□□□ -0.87
SNAI1-201ENST00000244050 MSRB1Q9NZV6 116 aa9.64□□□□□ -0.87
SNAI1-201ENST00000244050 C11orf21Q9P2W6 132 aa9.64□□□□□ -0.87
SNAI1-201ENST00000244050 NBEAL1Q6ZS30 2694 aa9.63□□□□□ -0.87
SNAI1-201ENST00000244050 OVOL1O14753 267 aa9.63□□□□□ -0.87
SNAI1-201ENST00000244050 NPYP01303 97 aa9.63□□□□□ -0.87
SNAI1-201ENST00000244050 FAM106AQ4KMX7 169 aa9.63□□□□□ -0.87
SNAI1-201ENST00000244050 LCNL1Q6ZST4 164 aa9.63□□□□□ -0.87
SNAI1-201ENST00000244050 IGHV4-4A0A075B6R2 117 aa9.62□□□□□ -0.87
SNAI1-201ENST00000244050 LOC389332A0A1B0GUA5 103 aa9.62□□□□□ -0.87
SNAI1-201ENST00000244050 LINC01546A6NGU7 62 aa9.62□□□□□ -0.87
SNAI1-201ENST00000244050 TCF21O43680 179 aa9.62□□□□□ -0.87
SNAI1-201ENST00000244050 IGHV3-11P01762 117 aa9.62□□□□□ -0.87
SNAI1-201ENST00000244050 COL5A1-AS1Q5SY13 56 aa9.62□□□□□ -0.87
SNAI1-201ENST00000244050 ZNF738Q8NE65 137 aa9.62□□□□□ -0.87
SNAI1-201ENST00000244050 DUX5Q96PT3 197 aa9.62□□□□□ -0.87
SNAI1-201ENST00000244050 MS4A6AQ9H2W1 248 aa9.62□□□□□ -0.87
SNAI1-201ENST00000244050 IGHV7-4-1A0A0J9YVY3 117 aa9.61□□□□□ -0.87
SNAI1-201ENST00000244050 HSBP1L1C9JCN9 74 aa9.61□□□□□ -0.87
SNAI1-201ENST00000244050 SNAI2O43623 268 aa9.61□□□□□ -0.87
SNAI1-201ENST00000244050 SMKR1H3BMG3 65 aa9.61□□□□□ -0.87
SNAI1-201ENST00000244050 K7EMT4 169 aa9.61□□□□□ -0.87
SNAI1-201ENST00000244050 HBDP02042 147 aa9.61□□□□□ -0.87
SNAI1-201ENST00000244050 TMEM158Q8WZ71 300 aa9.61□□□□□ -0.87
SNAI1-201ENST00000244050 ZNF702PQ9H963 129 aa9.61□□□□□ -0.87
SNAI1-201ENST00000244050 TRBV7-9A0A0J9YWB2 115 aa9.6□□□□□ -0.87
SNAI1-201ENST00000244050 hDV102S1A0JD36 115 aa9.6□□□□□ -0.87
SNAI1-201ENST00000244050 TMEM89A2RUT3 159 aa9.6□□□□□ -0.87
SNAI1-201ENST00000244050 PSMB8P28062 276 aa9.6□□□□□ -0.87
SNAI1-201ENST00000244050 CACNG7P62955 275 aa9.6□□□□□ -0.87
SNAI1-201ENST00000244050 BATFQ16520 125 aa9.6□□□□□ -0.87
SNAI1-201ENST00000244050 OR10J6PQ8NGY7 276 aa9.6□□□□□ -0.87
SNAI1-201ENST00000244050 MAP1LC3AQ9H492 121 aa9.6□□□□□ -0.87
SNAI1-201ENST00000244050 DAZ1Q9NQZ3 744 aaKnown RBP9.6□□□□□ -0.87
SNAI1-201ENST00000244050 NCR2O95944 276 aa9.59□□□□□ -0.87
SNAI1-201ENST00000244050 FOXE3Q13461 319 aa9.59□□□□□ -0.87
SNAI1-201ENST00000244050 KRTAP24-1Q3LI83 254 aa9.59□□□□□ -0.87
SNAI1-201ENST00000244050 C10orf99Q6UWK7 81 aa9.59□□□□□ -0.87
SNAI1-201ENST00000244050 ZFAND2AQ8N6M9 145 aa9.59□□□□□ -0.87
SNAI1-201ENST00000244050 FAM19A4Q96LR4 140 aa9.59□□□□□ -0.87
SNAI1-201ENST00000244050 RHPN1-AS1Q9BWJ2 59 aa9.59□□□□□ -0.87
SNAI1-201ENST00000244050 NXT2Q9NPJ8 142 aaKnown RBP9.59□□□□□ -0.87
SNAI1-201ENST00000244050 PEF1Q9UBV8 284 aaKnown RBP9.59□□□□□ -0.87
SNAI1-201ENST00000244050 SMPXQ9UHP9 88 aa9.59□□□□□ -0.87
SNAI1-201ENST00000244050 TIMM8BQ9Y5J9 83 aaPredicted RBP9.59□□□□□ -0.87
SNAI1-201ENST00000244050 PRSS47A8MTI9 375 aa9.58□□□□□ -0.88
SNAI1-201ENST00000244050 TNFRSF6BO95407 300 aa9.58□□□□□ -0.88
SNAI1-201ENST00000244050 LGALS9BQ3B8N2 356 aa9.58□□□□□ -0.88
SNAI1-201ENST00000244050 PRR9Q5T870 116 aa9.58□□□□□ -0.88
SNAI1-201ENST00000244050 LGALS9CQ6DKI2 356 aa9.58□□□□□ -0.88
SNAI1-201ENST00000244050 SMIM15Q7Z3B0 74 aa9.58□□□□□ -0.88
SNAI1-201ENST00000244050 APRG1Q8IVJ8 170 aa9.58□□□□□ -0.88
SNAI1-201ENST00000244050 TMEM86BQ8N661 226 aa9.58□□□□□ -0.88
SNAI1-201ENST00000244050 DEFB125Q8N687 156 aa9.58□□□□□ -0.88
SNAI1-201ENST00000244050 SCRT2Q9NQ03 307 aa9.58□□□□□ -0.88
SNAI1-201ENST00000244050 TRAV21A0A0B4J279 112 aa9.58□□□□□ -0.88
SNAI1-201ENST00000244050 H0Y8G0 127 aa9.58□□□□□ -0.88
SNAI1-201ENST00000244050 TM4SF20Q53R12 229 aa9.58□□□□□ -0.88
SNAI1-201ENST00000244050 SLC25A34Q6PIV7 304 aa9.58□□□□□ -0.88
SNAI1-201ENST00000244050 STPG4Q8N801 248 aa9.58□□□□□ -0.88
SNAI1-201ENST00000244050 DPF1Q92782 380 aa9.58□□□□□ -0.88
SNAI1-201ENST00000244050 MCRIP2Q9BUT9 160 aaKnown RBP9.58□□□□□ -0.88
SNAI1-201ENST00000244050 ANK2Q01484 3957 aa9.57□□□□□ -0.88
SNAI1-201ENST00000244050 DNAJC9-AS1A6NH13 148 aa9.57□□□□□ -0.88
SNAI1-201ENST00000244050 ZNF25P17030 456 aaPredicted RBP9.57□□□□□ -0.88
SNAI1-201ENST00000244050 EVI2AP22794 236 aa9.57□□□□□ -0.88
SNAI1-201ENST00000244050 SAMD13Q5VXD3 122 aa9.57□□□□□ -0.88
SNAI1-201ENST00000244050 OR8A1Q8NGG7 326 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms