RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 OR4B1Q8NGF8 309 aa6.59□□□□□ -1.35
VPS4B-201ENST00000238497 C18orf15Q96N68 181 aa6.59□□□□□ -1.35
VPS4B-201ENST00000238497 D6R8Y8 96 aa6.58□□□□□ -1.36
VPS4B-201ENST00000238497 M0R381 172 aa6.58□□□□□ -1.36
VPS4B-201ENST00000238497 A8MWP6 167 aa6.58□□□□□ -1.36
VPS4B-201ENST00000238497 LEPROTL1O95214 131 aa6.58□□□□□ -1.36
VPS4B-201ENST00000238497 DEFB136Q30KP8 78 aa6.58□□□□□ -1.36
VPS4B-201ENST00000238497 COX19Q49B96 90 aa6.58□□□□□ -1.36
VPS4B-201ENST00000238497 SPATA45Q537H7 98 aa6.58□□□□□ -1.36
VPS4B-201ENST00000238497 TCTEX1D4Q5JR98 221 aa6.58□□□□□ -1.36
VPS4B-201ENST00000238497 C18orf65Q6ZTR6 163 aa6.58□□□□□ -1.36
VPS4B-201ENST00000238497 FER1L6-AS1Q8NA97 138 aa6.58□□□□□ -1.36
VPS4B-201ENST00000238497 SVIPQ8NHG7 77 aa6.58□□□□□ -1.36
VPS4B-201ENST00000238497 AGPAT4-IT1Q9H0P7 198 aa6.58□□□□□ -1.36
VPS4B-201ENST00000238497 C19orf71A6NCJ1 209 aa6.58□□□□□ -1.36
VPS4B-201ENST00000238497 FOXE3Q13461 319 aa6.58□□□□□ -1.36
VPS4B-201ENST00000238497 KIR3DS1Q14943 382 aa6.58□□□□□ -1.36
VPS4B-201ENST00000238497 SAPCD1Q5SSQ6 148 aa6.58□□□□□ -1.36
VPS4B-201ENST00000238497 SPANXN1Q5VSR9 72 aa6.58□□□□□ -1.36
VPS4B-201ENST00000238497 RHPN1-AS1Q9BWJ2 59 aa6.58□□□□□ -1.36
VPS4B-201ENST00000238497 TP73-AS1Q9UF72 201 aa6.58□□□□□ -1.36
VPS4B-201ENST00000238497 TRBV7-1A0A0A6YYK4 115 aa6.57□□□□□ -1.36
VPS4B-201ENST00000238497 FABP5P3A8MUU1 101 aa6.57□□□□□ -1.36
VPS4B-201ENST00000238497 RNASE4P34096 147 aaKnown RBP6.57□□□□□ -1.36
VPS4B-201ENST00000238497 Q0VG73 95 aa6.57□□□□□ -1.36
VPS4B-201ENST00000238497 DEFB121Q5J5C9 76 aa6.57□□□□□ -1.36
VPS4B-201ENST00000238497 IGHG2P01859 326 aa6.57□□□□□ -1.36
VPS4B-201ENST00000238497 RPLP1P05386 114 aaKnown RBP6.57□□□□□ -1.36
VPS4B-201ENST00000238497 ZNF688P0C7X2 276 aa6.57□□□□□ -1.36
VPS4B-201ENST00000238497 LINC00614P0C842 121 aa6.57□□□□□ -1.36
VPS4B-201ENST00000238497 GATA1P15976 413 aaPredicted RBP6.57□□□□□ -1.36
VPS4B-201ENST00000238497 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.57□□□□□ -1.36
VPS4B-201ENST00000238497 Q6ZN92 141 aa6.57□□□□□ -1.36
VPS4B-201ENST00000238497 S100A7P31151 101 aa6.56□□□□□ -1.36
VPS4B-201ENST00000238497 HOXD3P31249 432 aaPredicted RBP6.56□□□□□ -1.36
VPS4B-201ENST00000238497 BMI1P35226 326 aa6.56□□□□□ -1.36
VPS4B-201ENST00000238497 IFI27P40305 119 aaPredicted RBP6.56□□□□□ -1.36
VPS4B-201ENST00000238497 RAB9AP51151 201 aa6.56□□□□□ -1.36
VPS4B-201ENST00000238497 SYNJ2BPP57105 145 aa6.56□□□□□ -1.36
VPS4B-201ENST00000238497 FAM106AQ4KMX7 169 aa6.56□□□□□ -1.36
VPS4B-201ENST00000238497 OR10J3Q5JRS4 329 aa6.56□□□□□ -1.36
VPS4B-201ENST00000238497 LOC102724200A0A096LPH7 203 aaPredicted RBP6.56□□□□□ -1.36
VPS4B-201ENST00000238497 TRAV26-2A0A0B4J265 109 aa6.56□□□□□ -1.36
VPS4B-201ENST00000238497 H3BVH4 76 aa6.56□□□□□ -1.36
VPS4B-201ENST00000238497 MRPS12O15235 138 aaKnown RBP6.56□□□□□ -1.36
VPS4B-201ENST00000238497 LYPD1Q8N2G4 141 aa6.56□□□□□ -1.36
VPS4B-201ENST00000238497 DPF1Q92782 380 aa6.56□□□□□ -1.36
VPS4B-201ENST00000238497 PRELID3AQ96N28 172 aa6.56□□□□□ -1.36
VPS4B-201ENST00000238497 ZFAND3Q9H8U3 227 aa6.56□□□□□ -1.36
VPS4B-201ENST00000238497 EBLN2Q6P2I7 272 aa6.56□□□□□ -1.36
VPS4B-201ENST00000238497 MRAPQ8TCY5 172 aa6.56□□□□□ -1.36
VPS4B-201ENST00000238497 AP5S1Q9NUS5 200 aa6.56□□□□□ -1.36
VPS4B-201ENST00000238497 ADARB2-AS1A8MUL3 147 aa6.55□□□□□ -1.36
VPS4B-201ENST00000238497 EREGO14944 169 aa6.55□□□□□ -1.36
VPS4B-201ENST00000238497 OR5AL1P0C617 328 aa6.55□□□□□ -1.36
VPS4B-201ENST00000238497 PDE6HQ13956 83 aa6.55□□□□□ -1.36
VPS4B-201ENST00000238497 OR10J6PQ8NGY7 276 aa6.55□□□□□ -1.36
VPS4B-201ENST00000238497 hDV102S1A0JD36 115 aa6.55□□□□□ -1.36
VPS4B-201ENST00000238497 MGPP08493 103 aa6.55□□□□□ -1.36
VPS4B-201ENST00000238497 ERASQ7Z444 233 aa6.55□□□□□ -1.36
VPS4B-201ENST00000238497 ZNF492Q9P255 531 aa6.55□□□□□ -1.36
VPS4B-201ENST00000238497 GAS8-AS1O95177 125 aa6.55□□□□□ -1.36
VPS4B-201ENST00000238497 REC114Q7Z4M0 266 aa6.55□□□□□ -1.36
VPS4B-201ENST00000238497 HINT1P49773 126 aaPredicted RBP6.54□□□□□ -1.36
VPS4B-201ENST00000238497 OR10AG1Q8NH19 301 aa6.54□□□□□ -1.36
VPS4B-201ENST00000238497 TRAV12-2A0A075B6T6 113 aa6.54□□□□□ -1.36
VPS4B-201ENST00000238497 CCL24O00175 119 aa6.54□□□□□ -1.36
VPS4B-201ENST00000238497 IGHG4P01861 327 aa6.54□□□□□ -1.36
VPS4B-201ENST00000238497 PSMG4Q5JS54 123 aa6.54□□□□□ -1.36
VPS4B-201ENST00000238497 SMIM15Q7Z3B0 74 aa6.54□□□□□ -1.36
VPS4B-201ENST00000238497 ATP5L2Q7Z4Y8 100 aa6.54□□□□□ -1.36
VPS4B-201ENST00000238497 OR4C46A6NHA9 309 aa6.53□□□□□ -1.36
VPS4B-201ENST00000238497 F5H697 171 aa6.53□□□□□ -1.36
VPS4B-201ENST00000238497 HNRNPA3P51991 378 aaKnown RBP6.53□□□□□ -1.36
VPS4B-201ENST00000238497 C20orf173Q96LM9 149 aa6.53□□□□□ -1.36
VPS4B-201ENST00000238497 IGHV1-24A0A0C4DH33 117 aa6.53□□□□□ -1.36
VPS4B-201ENST00000238497 A0A0G2JLM5 398 aa6.53□□□□□ -1.36
VPS4B-201ENST00000238497 A0A1B0GXF2 115 aa6.53□□□□□ -1.36
VPS4B-201ENST00000238497 HSBP1L1C9JCN9 74 aa6.53□□□□□ -1.36
VPS4B-201ENST00000238497 C1orf194Q5T5A4 169 aa6.53□□□□□ -1.36
VPS4B-201ENST00000238497 SLC50A1Q9BRV3 221 aa6.53□□□□□ -1.36
VPS4B-201ENST00000238497 NDUFAF3Q9BU61 184 aa6.53□□□□□ -1.36
VPS4B-201ENST00000238497 TMEM70Q9BUB7 260 aa6.53□□□□□ -1.36
VPS4B-201ENST00000238497 PEF1Q9UBV8 284 aaKnown RBP6.53□□□□□ -1.36
VPS4B-201ENST00000238497 SAMD5Q5TGI4 173 aa6.53□□□□□ -1.36
VPS4B-201ENST00000238497 FAM74A4Q5TZK3 123 aa6.53□□□□□ -1.36
VPS4B-201ENST00000238497 OR11H1Q8NG94 326 aa6.53□□□□□ -1.36
VPS4B-201ENST00000238497 MAP1LC3CQ9BXW4 147 aa6.53□□□□□ -1.36
VPS4B-201ENST00000238497 TRAV12-3A0A0B4J271 114 aa6.52□□□□□ -1.37
VPS4B-201ENST00000238497 FAM223BA6NKX1 122 aa6.52□□□□□ -1.37
VPS4B-201ENST00000238497 GNRH2O43555 120 aa6.52□□□□□ -1.37
VPS4B-201ENST00000238497 ELANEP08246 267 aa6.52□□□□□ -1.37
VPS4B-201ENST00000238497 BEAN1Q3B7T3 259 aa6.52□□□□□ -1.37
VPS4B-201ENST00000238497 MRPL51Q4U2R6 128 aaKnown RBP6.52□□□□□ -1.37
VPS4B-201ENST00000238497 FAM223AQ8IWN6 122 aa6.52□□□□□ -1.37
VPS4B-201ENST00000238497 ORMDL3Q8N138 153 aa6.52□□□□□ -1.37
VPS4B-201ENST00000238497 C11orf21Q9P2W6 132 aa6.52□□□□□ -1.37
VPS4B-201ENST00000238497 M0R143 59 aa6.52□□□□□ -1.37
VPS4B-201ENST00000238497 NPYP01303 97 aa6.52□□□□□ -1.37
VPS4B-201ENST00000238497 PRSS1P07477 247 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms