RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 RAB5BP61020 215 aa1.53□□□□□ -2.16
PRKD3-201ENST00000234179 Q6AWC8 147 aa1.53□□□□□ -2.16
PRKD3-201ENST00000234179 LINC00305Q7Z4B0 112 aa1.53□□□□□ -2.16
PRKD3-201ENST00000234179 FAM19A4Q96LR4 140 aa1.53□□□□□ -2.16
PRKD3-201ENST00000234179 ZNF492Q9P255 531 aa1.53□□□□□ -2.16
PRKD3-201ENST00000234179 FLG2Q5D862 2391 aaPredicted RBP1.53□□□□□ -2.16
PRKD3-201ENST00000234179 CT45A10P0DMU9 189 aa1.53□□□□□ -2.16
PRKD3-201ENST00000234179 PI3P19957 117 aa1.53□□□□□ -2.16
PRKD3-201ENST00000234179 NEDD8Q15843 81 aa1.53□□□□□ -2.16
PRKD3-201ENST00000234179 MDFICQ9P1T7 246 aa1.53□□□□□ -2.16
PRKD3-201ENST00000234179 WDR83OSQ9Y284 106 aa1.53□□□□□ -2.16
PRKD3-201ENST00000234179 PMS2P5A8MQ11 134 aa1.53□□□□□ -2.16
PRKD3-201ENST00000234179 K7EQD1 137 aa1.53□□□□□ -2.16
PRKD3-201ENST00000234179 S100A12P80511 92 aa1.53□□□□□ -2.16
PRKD3-201ENST00000234179 CFAP161Q6P656 301 aa1.53□□□□□ -2.16
PRKD3-201ENST00000234179 CMTM2Q8TAZ6 248 aa1.53□□□□□ -2.16
PRKD3-201ENST00000234179 SMIM30A4D0T7 59 aa1.53□□□□□ -2.17
PRKD3-201ENST00000234179 PRAF2O60831 178 aa1.53□□□□□ -2.17
PRKD3-201ENST00000234179 CRPP02741 224 aa1.53□□□□□ -2.17
PRKD3-201ENST00000234179 SMR3BP02814 79 aaPredicted RBP1.53□□□□□ -2.17
PRKD3-201ENST00000234179 IAPPP10997 89 aa1.53□□□□□ -2.17
PRKD3-201ENST00000234179 ZFP69Q49AA0 526 aa1.53□□□□□ -2.17
PRKD3-201ENST00000234179 ATRAIDQ6UW56 229 aa1.53□□□□□ -2.17
PRKD3-201ENST00000234179 LYZL2Q7Z4W2 148 aa1.53□□□□□ -2.17
PRKD3-201ENST00000234179 MCFD2Q8NI22 146 aa1.53□□□□□ -2.17
PRKD3-201ENST00000234179 SAT2Q96F10 170 aaPredicted RBP1.53□□□□□ -2.17
PRKD3-201ENST00000234179 FAM210AQ96ND0 272 aa1.53□□□□□ -2.17
PRKD3-201ENST00000234179 C1orf43Q9BWL3 253 aa1.53□□□□□ -2.17
PRKD3-201ENST00000234179 DNAH5Q8TE73 4624 aa1.53□□□□□ -2.17
PRKD3-201ENST00000234179 DNAH2Q9P225 4427 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 A0A087WX48 190 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 SLC38A11Q08AI6 406 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 TOMM5Q8N4H5 51 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 RNF182Q8N6D2 247 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 TSKUQ8WUA8 353 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 ZC2HC1AQ96GY0 325 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 DIRAS2Q96HU8 199 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 UHRF2Q96PU4 802 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 RBM38Q9H0Z9 239 aaKnown RBP1.52□□□□□ -2.17
PRKD3-201ENST00000234179 LINC00474Q9P2X8 69 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 AGPAT2O15120 278 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 S100A6P06703 90 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 RNASE4P34096 147 aaKnown RBP1.52□□□□□ -2.17
PRKD3-201ENST00000234179 MIAQ16674 131 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 SAPCD1Q5SSQ6 148 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 RAB2BQ8WUD1 216 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 AGPAT4-IT1Q9H0P7 198 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 CSMD3Q7Z407 3707 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 IGKV1OR2-108A0A075B7D4 117 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 HSBP1L1C9JCN9 74 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 RAB4AP20338 218 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 SULT1A1P50225 295 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 BAXQ07812 192 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 SPANXN2Q5MJ10 180 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 LYRM7Q5U5X0 104 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 SCXQ7RTU7 201 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 WFDC10BQ8IUB3 73 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 ZFAND2AQ8N6M9 145 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 MED28Q9H204 178 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 OTORQ9NRC9 128 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 MRPL16Q9NX20 251 aaKnown RBP1.52□□□□□ -2.17
PRKD3-201ENST00000234179 KMT2AQ03164 3969 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 H3BMQ9 156 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 RAB5CP51148 216 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 DEFA1P59665 94 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 DEFA3P59666 94 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 RNF151Q2KHN1 245 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 IAH1Q2TAA2 248 aaPredicted RBP1.52□□□□□ -2.17
PRKD3-201ENST00000234179 KHDC3LQ587J8 217 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 PQLC2Q6ZP29 291 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 TCEAL7Q9BRU2 100 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 RPH3ALQ9UNE2 315 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 FAT2Q9NYQ8 4349 aa1.52□□□□□ -2.17
PRKD3-201ENST00000234179 TRAV8-4A0A0B4J246 113 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 SLC17A3O00476 420 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 SSNA1O43805 119 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 P01737 135 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 NBEAP1P0C6P0 100 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 RPL36AP83881 106 aaKnown RBP1.51□□□□□ -2.17
PRKD3-201ENST00000234179 CYCSP99999 105 aaKnown RBP1.51□□□□□ -2.17
PRKD3-201ENST00000234179 FCN2Q15485 313 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 TMEM183BQ1AE95 376 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 NIT1Q86X76 327 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 TMEM183AQ8IXX5 376 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 CYB561D1Q8N8Q1 229 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 OR10G7Q8NGN6 311 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 RPL36ALQ969Q0 106 aaKnown RBP1.51□□□□□ -2.17
PRKD3-201ENST00000234179 BTCP35070 178 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 S100A10P60903 97 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 ARL16Q0P5N6 197 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 PET117Q6UWS5 81 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 INO80EQ8NBZ0 244 aaPredicted RBP1.51□□□□□ -2.17
PRKD3-201ENST00000234179 COPS9Q8WXC6 57 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 BATF3Q9NR55 127 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 PRR13Q9NZ81 148 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 OR5AC2Q9NZP5 309 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 IGHV3-64A0A075B6Q5 118 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 E5RGE8 158 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 H3BS24 57 aa1.51□□□□□ -2.17
PRKD3-201ENST00000234179 HSBP1O75506 76 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms