RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 SGK494Q96LW2 274 aa8.05□□□□□ -1.12
SF3B6-201ENST00000233468 NOP10Q9NPE3 64 aaKnown RBP8.05□□□□□ -1.12
SF3B6-201ENST00000233468 GNG13Q9P2W3 67 aa8.05□□□□□ -1.12
SF3B6-201ENST00000233468 TRBV6-1A0A0K0K1D8 114 aa8.04□□□□□ -1.12
SF3B6-201ENST00000233468 IGLV2-11P01706 119 aa8.04□□□□□ -1.12
SF3B6-201ENST00000233468 PRM2P04554 102 aa8.04□□□□□ -1.12
SF3B6-201ENST00000233468 PFN1P07737 140 aaKnown RBP8.04□□□□□ -1.12
SF3B6-201ENST00000233468 DEFB130BP0DP73 79 aa8.04□□□□□ -1.12
SF3B6-201ENST00000233468 DEFB130AP0DP74 79 aa8.04□□□□□ -1.12
SF3B6-201ENST00000233468 ZNF415Q09FC8 603 aa8.04□□□□□ -1.12
SF3B6-201ENST00000233468 TDRG1Q3Y452 100 aa8.04□□□□□ -1.12
SF3B6-201ENST00000233468 PRR9Q5T870 116 aa8.04□□□□□ -1.12
SF3B6-201ENST00000233468 ALKAL2Q6UX46 152 aa8.04□□□□□ -1.12
SF3B6-201ENST00000233468 NAGKQ9UJ70 344 aa8.04□□□□□ -1.12
SF3B6-201ENST00000233468 KLF12Q9Y4X4 402 aa8.04□□□□□ -1.12
SF3B6-201ENST00000233468 TRAV34A0A0B4J273 112 aa8.03□□□□□ -1.12
SF3B6-201ENST00000233468 PLAC8L1A1L4L8 177 aa8.03□□□□□ -1.12
SF3B6-201ENST00000233468 PDE6DO43924 150 aa8.03□□□□□ -1.12
SF3B6-201ENST00000233468 GCGP01275 180 aa8.03□□□□□ -1.12
SF3B6-201ENST00000233468 ATP5G1P05496 136 aa8.03□□□□□ -1.12
SF3B6-201ENST00000233468 ATP5G3P48201 142 aa8.03□□□□□ -1.12
SF3B6-201ENST00000233468 TMEM183BQ1AE95 376 aa8.03□□□□□ -1.12
SF3B6-201ENST00000233468 MUC21Q5SSG8 566 aa8.03□□□□□ -1.12
SF3B6-201ENST00000233468 ZNF767PQ75MW2 155 aa8.03□□□□□ -1.12
SF3B6-201ENST00000233468 Q86TA4 180 aa8.03□□□□□ -1.12
SF3B6-201ENST00000233468 SPXQ9BT56 116 aa8.03□□□□□ -1.12
SF3B6-201ENST00000233468 SDF2L1Q9HCN8 221 aa8.03□□□□□ -1.12
SF3B6-201ENST00000233468 FABP5P3A8MUU1 101 aa8.02□□□□□ -1.13
SF3B6-201ENST00000233468 IGLL5B9A064 214 aa8.02□□□□□ -1.13
SF3B6-201ENST00000233468 TCL1AP56279 114 aa8.02□□□□□ -1.13
SF3B6-201ENST00000233468 LGALS9BQ3B8N2 356 aa8.02□□□□□ -1.13
SF3B6-201ENST00000233468 TVP23CQ96ET8 276 aa8.02□□□□□ -1.13
SF3B6-201ENST00000233468 LINC00479Q96M42 142 aa8.02□□□□□ -1.13
SF3B6-201ENST00000233468 NDUFAF3Q9BU61 184 aa8.02□□□□□ -1.13
SF3B6-201ENST00000233468 GSN-AS1Q9NRJ2 163 aa8.02□□□□□ -1.13
SF3B6-201ENST00000233468 TRGV2A0A075B6R0 118 aa8.01□□□□□ -1.13
SF3B6-201ENST00000233468 LTAP01374 205 aa8.01□□□□□ -1.13
SF3B6-201ENST00000233468 BCL2P10415 239 aa8.01□□□□□ -1.13
SF3B6-201ENST00000233468 HTN3P15516 51 aa8.01□□□□□ -1.13
SF3B6-201ENST00000233468 CCL20P78556 96 aa8.01□□□□□ -1.13
SF3B6-201ENST00000233468 MEF2BQ02080 365 aaPredicted RBP8.01□□□□□ -1.13
SF3B6-201ENST00000233468 COX8CQ7Z4L0 72 aa8.01□□□□□ -1.13
SF3B6-201ENST00000233468 TMEM183AQ8IXX5 376 aa8.01□□□□□ -1.13
SF3B6-201ENST00000233468 C11orf72Q8NBR9 251 aa8.01□□□□□ -1.13
SF3B6-201ENST00000233468 LINC00476Q8WZB0 136 aa8.01□□□□□ -1.13
SF3B6-201ENST00000233468 C8orf49Q96NF6 230 aa8.01□□□□□ -1.13
SF3B6-201ENST00000233468 VAX2Q9UIW0 290 aa8.01□□□□□ -1.13
SF3B6-201ENST00000233468 TP53TG3Q9ULZ0 132 aa8.01□□□□□ -1.13
SF3B6-201ENST00000233468 TRGV1A0A0A0MS02 117 aa8□□□□□ -1.13
SF3B6-201ENST00000233468 LY6G6CO95867 125 aa8□□□□□ -1.13
SF3B6-201ENST00000233468 FAM162BQ5T6X4 162 aa8□□□□□ -1.13
SF3B6-201ENST00000233468 BAGE2Q86Y30 109 aa8□□□□□ -1.13
SF3B6-201ENST00000233468 LINC00612Q8N6U2 182 aa8□□□□□ -1.13
SF3B6-201ENST00000233468 C18orf15Q96N68 181 aa8□□□□□ -1.13
SF3B6-201ENST00000233468 IGHV4-4A0A075B6R2 117 aa7.99□□□□□ -1.13
SF3B6-201ENST00000233468 GAGE12BA1L429 117 aa7.99□□□□□ -1.13
SF3B6-201ENST00000233468 SPINK4O60575 86 aa7.99□□□□□ -1.13
SF3B6-201ENST00000233468 GAGE7O76087 117 aa7.99□□□□□ -1.13
SF3B6-201ENST00000233468 GAGE12FP0CL80 117 aa7.99□□□□□ -1.13
SF3B6-201ENST00000233468 GAGE12GP0CL81 117 aa7.99□□□□□ -1.13
SF3B6-201ENST00000233468 GAGE12IP0CL82 117 aa7.99□□□□□ -1.13
SF3B6-201ENST00000233468 C11orf52Q96A22 123 aa7.99□□□□□ -1.13
SF3B6-201ENST00000233468 KMT2AQ03164 3969 aa7.98□□□□□ -1.13
SF3B6-201ENST00000233468 F5H768 121 aa7.98□□□□□ -1.13
SF3B6-201ENST00000233468 M0R2P5 195 aa7.98□□□□□ -1.13
SF3B6-201ENST00000233468 ORM1P02763 201 aa7.98□□□□□ -1.13
SF3B6-201ENST00000233468 TYMSP04818 313 aa7.98□□□□□ -1.13
SF3B6-201ENST00000233468 S100A4P26447 101 aaKnown RBP7.98□□□□□ -1.13
SF3B6-201ENST00000233468 RPL35P42766 123 aaKnown RBP7.98□□□□□ -1.13
SF3B6-201ENST00000233468 ZNF80P51504 273 aaPredicted RBP7.98□□□□□ -1.13
SF3B6-201ENST00000233468 SLAQ13239 276 aa7.98□□□□□ -1.13
SF3B6-201ENST00000233468 Q6ZQT7 251 aa7.98□□□□□ -1.13
SF3B6-201ENST00000233468 Q6ZTI0 123 aa7.98□□□□□ -1.13
SF3B6-201ENST00000233468 C15orf53Q8NAA6 179 aa7.98□□□□□ -1.13
SF3B6-201ENST00000233468 LYPD6BQ8NI32 183 aa7.98□□□□□ -1.13
SF3B6-201ENST00000233468 SMIM12Q96EX1 92 aa7.98□□□□□ -1.13
SF3B6-201ENST00000233468 KRTAP4-8Q9BYQ9 185 aa7.98□□□□□ -1.13
SF3B6-201ENST00000233468 BIN3Q9NQY0 253 aa7.98□□□□□ -1.13
SF3B6-201ENST00000233468 MED9Q9NWA0 146 aa7.98□□□□□ -1.13
SF3B6-201ENST00000233468 MDFICQ9P1T7 246 aa7.98□□□□□ -1.13
SF3B6-201ENST00000233468 IGHV3-16A0A0C4DH30 117 aa7.97□□□□□ -1.13
SF3B6-201ENST00000233468 RBFOX3A6NFN3 312 aa7.97□□□□□ -1.13
SF3B6-201ENST00000233468 GNRH2O43555 120 aa7.97□□□□□ -1.13
SF3B6-201ENST00000233468 ASIPP42127 132 aa7.97□□□□□ -1.13
SF3B6-201ENST00000233468 ZNF674Q2M3X9 581 aa7.97□□□□□ -1.13
SF3B6-201ENST00000233468 TEX261Q6UWH6 196 aa7.97□□□□□ -1.13
SF3B6-201ENST00000233468 RASL10AQ92737 203 aa7.97□□□□□ -1.13
SF3B6-201ENST00000233468 ZC2HC1AQ96GY0 325 aa7.97□□□□□ -1.13
SF3B6-201ENST00000233468 APLNQ9ULZ1 77 aa7.97□□□□□ -1.13
SF3B6-201ENST00000233468 B4DEV8 164 aa7.96□□□□□ -1.14
SF3B6-201ENST00000233468 PAX4O43316 350 aa7.96□□□□□ -1.14
SF3B6-201ENST00000233468 SH2D1AO60880 128 aa7.96□□□□□ -1.14
SF3B6-201ENST00000233468 NDUFS6O75380 124 aaKnown RBP7.96□□□□□ -1.14
SF3B6-201ENST00000233468 P0DMU3 169 aa7.96□□□□□ -1.14
SF3B6-201ENST00000233468 FAM231AP0DMU4 169 aa7.96□□□□□ -1.14
SF3B6-201ENST00000233468 FAM231CP0DMU5 169 aa7.96□□□□□ -1.14
SF3B6-201ENST00000233468 GNG4P50150 75 aa7.96□□□□□ -1.14
SF3B6-201ENST00000233468 OR5I1Q13606 314 aa7.96□□□□□ -1.14
SF3B6-201ENST00000233468 LGALS9CQ6DKI2 356 aa7.96□□□□□ -1.14
SF3B6-201ENST00000233468 DAZAP1Q96EP5 407 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms