RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 PIP4P2Q8N4L2 257 aa6.54□□□□□ -1.36
APOB-201ENST00000233242 SSC4DQ8WTU2 575 aa6.54□□□□□ -1.36
APOB-201ENST00000233242 OBSL1O75147 1896 aa6.54□□□□□ -1.36
APOB-201ENST00000233242 FAM236AA0A1B0GUQ0 79 aa6.54□□□□□ -1.36
APOB-201ENST00000233242 FAM236BA0A1B0GV22 79 aa6.54□□□□□ -1.36
APOB-201ENST00000233242 LINC01620Q4KN68 170 aa6.54□□□□□ -1.36
APOB-201ENST00000233242 DKK1O94907 266 aa6.53□□□□□ -1.36
APOB-201ENST00000233242 TDRG1Q3Y452 100 aa6.53□□□□□ -1.36
APOB-201ENST00000233242 ICOSQ9Y6W8 199 aa6.53□□□□□ -1.36
APOB-201ENST00000233242 TEX36Q5VZQ5 186 aa6.53□□□□□ -1.36
APOB-201ENST00000233242 TRAV26-1A0A087WT03 109 aa6.53□□□□□ -1.36
APOB-201ENST00000233242 EGR2P11161 476 aaPredicted RBP6.53□□□□□ -1.36
APOB-201ENST00000233242 ANKRD39Q53RE8 183 aa6.53□□□□□ -1.36
APOB-201ENST00000233242 IGF2BP2-AS1Q96M15 143 aa6.53□□□□□ -1.36
APOB-201ENST00000233242 WFDC2Q14508 124 aa6.53□□□□□ -1.36
APOB-201ENST00000233242 CFHR4Q92496 578 aa6.53□□□□□ -1.36
APOB-201ENST00000233242 FXYD2P54710 66 aa6.52□□□□□ -1.36
APOB-201ENST00000233242 PRB3Q04118 309 aaPredicted RBP6.52□□□□□ -1.37
APOB-201ENST00000233242 TRAV26-2A0A0B4J265 109 aa6.52□□□□□ -1.37
APOB-201ENST00000233242 NUPR1O60356 82 aa6.52□□□□□ -1.37
APOB-201ENST00000233242 PIFOQ8TCI5 191 aa6.52□□□□□ -1.37
APOB-201ENST00000233242 WFDC12Q8WWY7 111 aa6.52□□□□□ -1.37
APOB-201ENST00000233242 A0A1B0GX51 115 aa6.52□□□□□ -1.37
APOB-201ENST00000233242 C17orf58Q2M2W7 97 aa6.52□□□□□ -1.37
APOB-201ENST00000233242 MGAMO43451 1857 aa6.52□□□□□ -1.37
APOB-201ENST00000233242 B4DSR2 109 aa6.52□□□□□ -1.37
APOB-201ENST00000233242 RNF166Q96A37 237 aaPredicted RBP6.52□□□□□ -1.37
APOB-201ENST00000233242 TMEM219Q86XT9 240 aa6.52□□□□□ -1.37
APOB-201ENST00000233242 hADV29S1A0JD25 119 aa6.52□□□□□ -1.37
APOB-201ENST00000233242 CCDC168Q8NDH2 2452 aa6.52□□□□□ -1.37
APOB-201ENST00000233242 CD59P13987 128 aa6.52□□□□□ -1.37
APOB-201ENST00000233242 WIPF3A6NGB9 483 aa6.52□□□□□ -1.37
APOB-201ENST00000233242 TRBV6-1A0A0K0K1D8 114 aa6.51□□□□□ -1.37
APOB-201ENST00000233242 UBE2E1P51965 193 aa6.51□□□□□ -1.37
APOB-201ENST00000233242 LYNX1G3V0Z9 82 aa6.51□□□□□ -1.37
APOB-201ENST00000233242 LYNX1P0DP58 116 aa6.51□□□□□ -1.37
APOB-201ENST00000233242 SLC25A29Q8N8R3 303 aa6.51□□□□□ -1.37
APOB-201ENST00000233242 TECTAO75443 2155 aa6.51□□□□□ -1.37
APOB-201ENST00000233242 Q0VFX4 171 aa6.51□□□□□ -1.37
APOB-201ENST00000233242 ANXA2RQ3ZCQ2 193 aa6.51□□□□□ -1.37
APOB-201ENST00000233242 OVOL3O00110 214 aa6.51□□□□□ -1.37
APOB-201ENST00000233242 GATA3P23771 443 aa6.51□□□□□ -1.37
APOB-201ENST00000233242 TRBV10-2A0A0K0K1G8 114 aa6.51□□□□□ -1.37
APOB-201ENST00000233242 MRPL23Q16540 153 aaKnown RBP6.51□□□□□ -1.37
APOB-201ENST00000233242 MSRB2Q9Y3D2 182 aa6.51□□□□□ -1.37
APOB-201ENST00000233242 TICRRQ7Z2Z1 1910 aa6.51□□□□□ -1.37
APOB-201ENST00000233242 CUL9Q8IWT3 2517 aa6.51□□□□□ -1.37
APOB-201ENST00000233242 Q6ZUT4 128 aa6.51□□□□□ -1.37
APOB-201ENST00000233242 SPATA25Q9BR10 227 aa6.51□□□□□ -1.37
APOB-201ENST00000233242 GP9P14770 177 aa6.5□□□□□ -1.37
APOB-201ENST00000233242 NDUFV3P56181 108 aaKnown RBP6.5□□□□□ -1.37
APOB-201ENST00000233242 H3BUA1 57 aa6.5□□□□□ -1.37
APOB-201ENST00000233242 NKAPP1Q8N9T2 125 aa6.5□□□□□ -1.37
APOB-201ENST00000233242 NBL1P41271 181 aa6.5□□□□□ -1.37
APOB-201ENST00000233242 IGHG2P01859 326 aa6.5□□□□□ -1.37
APOB-201ENST00000233242 PDE6GP18545 87 aa6.5□□□□□ -1.37
APOB-201ENST00000233242 CTRLP40313 264 aa6.5□□□□□ -1.37
APOB-201ENST00000233242 PLA2G2EQ9NZK7 142 aa6.5□□□□□ -1.37
APOB-201ENST00000233242 NLRC5Q86WI3 1866 aa6.5□□□□□ -1.37
APOB-201ENST00000233242 H3BUX3 64 aa6.5□□□□□ -1.37
APOB-201ENST00000233242 RSPO1Q2MKA7 263 aaPredicted RBP6.5□□□□□ -1.37
APOB-201ENST00000233242 PFN2P35080 140 aa6.5□□□□□ -1.37
APOB-201ENST00000233242 LINC00643Q86TS7 51 aa6.5□□□□□ -1.37
APOB-201ENST00000233242 PRB4P10163 310 aaPredicted RBP6.5□□□□□ -1.37
APOB-201ENST00000233242 Q9H8V8 135 aa6.5□□□□□ -1.37
APOB-201ENST00000233242 A0A1W2PRX2 142 aa6.49□□□□□ -1.37
APOB-201ENST00000233242 ATP6V0E1O15342 81 aa6.49□□□□□ -1.37
APOB-201ENST00000233242 WDR86Q86TI4 376 aa6.49□□□□□ -1.37
APOB-201ENST00000233242 KAAG1Q9UBP8 84 aa6.49□□□□□ -1.37
APOB-201ENST00000233242 A4D1N5 150 aa6.49□□□□□ -1.37
APOB-201ENST00000233242 ZNF561-AS1K7EIQ3 104 aa6.49□□□□□ -1.37
APOB-201ENST00000233242 DUX4L9Q6RFH8 374 aaPredicted RBP6.49□□□□□ -1.37
APOB-201ENST00000233242 Q6ZSR3 168 aa6.49□□□□□ -1.37
APOB-201ENST00000233242 ALPK3Q96L96 1907 aa6.49□□□□□ -1.37
APOB-201ENST00000233242 RNF152Q8N8N0 203 aa6.49□□□□□ -1.37
APOB-201ENST00000233242 LTBP1Q14766 1721 aa6.49□□□□□ -1.37
APOB-201ENST00000233242 C22orf46C9J442 243 aa6.49□□□□□ -1.37
APOB-201ENST00000233242 JMJD7-PLA2G4BH0Y9G9 81 aa6.49□□□□□ -1.37
APOB-201ENST00000233242 TIMM17AQ99595 171 aa6.49□□□□□ -1.37
APOB-201ENST00000233242 LINC00527Q9UJ94 153 aa6.49□□□□□ -1.37
APOB-201ENST00000233242 E9PLD3 99 aa6.49□□□□□ -1.37
APOB-201ENST00000233242 ARTNQ5T4W7 220 aa6.49□□□□□ -1.37
APOB-201ENST00000233242 ZNF491Q8N8L2 437 aa6.49□□□□□ -1.37
APOB-201ENST00000233242 TINCRA0A1B0GVN0 87 aa6.49□□□□□ -1.37
APOB-201ENST00000233242 IGHV3-53P01767 116 aa6.48□□□□□ -1.37
APOB-201ENST00000233242 DEFB104AQ8WTQ1 72 aa6.48□□□□□ -1.37
APOB-201ENST00000233242 SAA4P35542 130 aa6.48□□□□□ -1.37
APOB-201ENST00000233242 LTBRP36941 435 aa6.48□□□□□ -1.37
APOB-201ENST00000233242 LYPD6Q86Y78 171 aa6.48□□□□□ -1.37
APOB-201ENST00000233242 LYPD2Q6UXB3 125 aa6.48□□□□□ -1.37
APOB-201ENST00000233242 WDR90Q96KV7 1748 aa6.48□□□□□ -1.37
APOB-201ENST00000233242 FUSP35637 526 aaKnown RBP eCLIP6.48□□□□□ -1.37
APOB-201ENST00000233242 MP68P56378 58 aa6.48□□□□□ -1.37
APOB-201ENST00000233242 DYNAPQ8N1N2 210 aa6.48□□□□□ -1.37
APOB-201ENST00000233242 DEFB131AP59861 70 aa6.48□□□□□ -1.37
APOB-201ENST00000233242 ARHGAP32A7KAX9 2087 aa6.48□□□□□ -1.37
APOB-201ENST00000233242 ATP5EP2Q5VTU8 51 aa6.48□□□□□ -1.37
APOB-201ENST00000233242 LOXP28300 417 aaPredicted RBP6.48□□□□□ -1.37
APOB-201ENST00000233242 IGLV1-44P01699 117 aa6.47□□□□□ -1.37
APOB-201ENST00000233242 PSMB8P28062 276 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms