RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 LENEPQ9Y5L5 61 aa12.4□□□□□ -0.42
LTBR-201ENST00000228918 H3BVH4 76 aa12.4□□□□□ -0.42
LTBR-201ENST00000228918 LY6DQ14210 128 aa12.4□□□□□ -0.42
LTBR-201ENST00000228918 SAMD13Q5VXD3 122 aa12.4□□□□□ -0.42
LTBR-201ENST00000228918 SMPXQ9UHP9 88 aa12.4□□□□□ -0.42
LTBR-201ENST00000228918 C19orf84I3L1E1 186 aa12.39□□□□□ -0.43
LTBR-201ENST00000228918 LAGE3Q14657 143 aa12.39□□□□□ -0.43
LTBR-201ENST00000228918 GPHB5Q86YW7 130 aa12.39□□□□□ -0.43
LTBR-201ENST00000228918 SPCS1Q9Y6A9 102 aa12.39□□□□□ -0.43
LTBR-201ENST00000228918 DPM2O94777 84 aa12.39□□□□□ -0.43
LTBR-201ENST00000228918 IGHV4-39P01824 125 aa12.39□□□□□ -0.43
LTBR-201ENST00000228918 UNQ9165/PRO28630Q6UXU0 137 aa12.39□□□□□ -0.43
LTBR-201ENST00000228918 SVIPQ8NHG7 77 aa12.39□□□□□ -0.43
LTBR-201ENST00000228918 IGHV1-69DA0A0B4J2H0 117 aa12.38□□□□□ -0.43
LTBR-201ENST00000228918 TRBV12-3P01733 135 aa12.38□□□□□ -0.43
LTBR-201ENST00000228918 IGHV1-69P01742 117 aa12.38□□□□□ -0.43
LTBR-201ENST00000228918 HIGD1BQ9P298 99 aa12.38□□□□□ -0.43
LTBR-201ENST00000228918 IGF1P05019 195 aa12.37□□□□□ -0.43
LTBR-201ENST00000228918 SCGB1A1P11684 91 aa12.37□□□□□ -0.43
LTBR-201ENST00000228918 BRD3OSQ6XYD6 125 aa12.37□□□□□ -0.43
LTBR-201ENST00000228918 TRAV40A0A0B4J280 105 aa12.37□□□□□ -0.43
LTBR-201ENST00000228918 NDUFA4O00483 81 aa12.37□□□□□ -0.43
LTBR-201ENST00000228918 SOCS3O14543 225 aa12.37□□□□□ -0.43
LTBR-201ENST00000228918 ZFAND2AQ8N6M9 145 aa12.37□□□□□ -0.43
LTBR-201ENST00000228918 MRAP2Q96G30 205 aa12.37□□□□□ -0.43
LTBR-201ENST00000228918 TTTY13Q9BZ97 58 aa12.37□□□□□ -0.43
LTBR-201ENST00000228918 TMEM8BA6NDV4 472 aa12.36□□□□□ -0.43
LTBR-201ENST00000228918 ZC2HC1BQ5TFG8 222 aa12.36□□□□□ -0.43
LTBR-201ENST00000228918 RAB37Q96AX2 223 aa12.36□□□□□ -0.43
LTBR-201ENST00000228918 LINC00477Q96M19 166 aa12.36□□□□□ -0.43
LTBR-201ENST00000228918 GTSCR1Q86UQ5 136 aa12.36□□□□□ -0.43
LTBR-201ENST00000228918 MYOZ3Q8TDC0 251 aa12.36□□□□□ -0.43
LTBR-201ENST00000228918 MRPL35Q9NZE8 188 aaKnown RBP12.36□□□□□ -0.43
LTBR-201ENST00000228918 J3KRW8 73 aa12.35□□□□□ -0.43
LTBR-201ENST00000228918 HLA-DRB4P13762 266 aa12.35□□□□□ -0.43
LTBR-201ENST00000228918 HLA-DRB4X5D2U9 266 aa12.35□□□□□ -0.43
LTBR-201ENST00000228918 OVOL1O14753 267 aa12.35□□□□□ -0.43
LTBR-201ENST00000228918 FABP2P12104 132 aa12.35□□□□□ -0.43
LTBR-201ENST00000228918 SRSF1Q07955 248 aaKnown RBP eCLIP12.35□□□□□ -0.43
LTBR-201ENST00000228918 TM4SF20Q53R12 229 aa12.35□□□□□ -0.43
LTBR-201ENST00000228918 OR10J6PQ8NGY7 276 aa12.35□□□□□ -0.43
LTBR-201ENST00000228918 CHAC1Q9BUX1 264 aa12.35□□□□□ -0.43
LTBR-201ENST00000228918 SMIM2Q9BVW6 85 aa12.35□□□□□ -0.43
LTBR-201ENST00000228918 TRAV21A0A0B4J279 112 aa12.34□□□□□ -0.43
LTBR-201ENST00000228918 TMEM160Q9NX00 188 aa12.34□□□□□ -0.43
LTBR-201ENST00000228918 A0A087WX48 190 aa12.34□□□□□ -0.43
LTBR-201ENST00000228918 TRBV25-1A0A075B6N4 114 aa12.33□□□□□ -0.44
LTBR-201ENST00000228918 IGHV4-61A0A0C4DH41 118 aa12.33□□□□□ -0.44
LTBR-201ENST00000228918 H3BUA1 57 aa12.33□□□□□ -0.44
LTBR-201ENST00000228918 BRI3O95415 125 aa12.33□□□□□ -0.44
LTBR-201ENST00000228918 FXYD2P54710 66 aa12.33□□□□□ -0.44
LTBR-201ENST00000228918 DEFB1P60022 68 aa12.33□□□□□ -0.44
LTBR-201ENST00000228918 NCOR2Q9Y618 2525 aa12.32□□□□□ -0.44
LTBR-201ENST00000228918 TEX48A0A1B0GUV7 120 aa12.32□□□□□ -0.44
LTBR-201ENST00000228918 IGHG2P01859 326 aa12.32□□□□□ -0.44
LTBR-201ENST00000228918 AZU1P20160 251 aa12.32□□□□□ -0.44
LTBR-201ENST00000228918 GCSHP23434 173 aa12.32□□□□□ -0.44
LTBR-201ENST00000228918 SAMD5Q5TGI4 173 aa12.32□□□□□ -0.44
LTBR-201ENST00000228918 USMG5Q96IX5 58 aa12.32□□□□□ -0.44
LTBR-201ENST00000228918 FAM19A4Q96LR4 140 aa12.32□□□□□ -0.44
LTBR-201ENST00000228918 M0R381 172 aa12.32□□□□□ -0.44
LTBR-201ENST00000228918 IGHV4-38-2P0DP08 117 aa12.32□□□□□ -0.44
LTBR-201ENST00000228918 LY6EQ16553 131 aa12.32□□□□□ -0.44
LTBR-201ENST00000228918 PIMREGQ9BSJ6 248 aa12.32□□□□□ -0.44
LTBR-201ENST00000228918 VPS13CQ709C8 3753 aa12.32□□□□□ -0.44
LTBR-201ENST00000228918 IGHV3-11P01762 117 aa12.31□□□□□ -0.44
LTBR-201ENST00000228918 ASIPP42127 132 aa12.31□□□□□ -0.44
LTBR-201ENST00000228918 SIGMAR1Q99720 223 aa12.31□□□□□ -0.44
LTBR-201ENST00000228918 DPH3P1Q9H4G8 78 aa12.31□□□□□ -0.44
LTBR-201ENST00000228918 CHD8Q9HCK8 2581 aa12.31□□□□□ -0.44
LTBR-201ENST00000228918 SPRY2O43597 315 aa12.31□□□□□ -0.44
LTBR-201ENST00000228918 SMIM13P0DJ93 91 aa12.31□□□□□ -0.44
LTBR-201ENST00000228918 GNLYP22749 145 aa12.31□□□□□ -0.44
LTBR-201ENST00000228918 S100A4P26447 101 aaKnown RBP12.31□□□□□ -0.44
LTBR-201ENST00000228918 RPL24P83731 157 aaKnown RBP12.31□□□□□ -0.44
LTBR-201ENST00000228918 ANXA2RQ3ZCQ2 193 aa12.31□□□□□ -0.44
LTBR-201ENST00000228918 APRG1Q8IVJ8 170 aa12.31□□□□□ -0.44
LTBR-201ENST00000228918 RASL10AQ92737 203 aa12.31□□□□□ -0.44
LTBR-201ENST00000228918 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.3□□□□□ -0.44
LTBR-201ENST00000228918 MED14OSP0DP75 135 aa12.3□□□□□ -0.44
LTBR-201ENST00000228918 PLNP26678 52 aa12.3□□□□□ -0.44
LTBR-201ENST00000228918 SUMO2P61956 95 aaKnown RBP12.3□□□□□ -0.44
LTBR-201ENST00000228918 KLK15Q9H2R5 256 aa12.3□□□□□ -0.44
LTBR-201ENST00000228918 SPTAN1Q13813 2472 aaKnown RBP12.3□□□□□ -0.44
LTBR-201ENST00000228918 TRAV12-1A0A0B4J245 112 aa12.3□□□□□ -0.44
LTBR-201ENST00000228918 A6NDX4 124 aa12.3□□□□□ -0.44
LTBR-201ENST00000228918 H3BUX3 64 aa12.3□□□□□ -0.44
LTBR-201ENST00000228918 ORMDL2Q53FV1 153 aa12.3□□□□□ -0.44
LTBR-201ENST00000228918 C20orf78Q9BR46 151 aa12.3□□□□□ -0.44
LTBR-201ENST00000228918 GTSF1LQ9H1H1 148 aa12.3□□□□□ -0.44
LTBR-201ENST00000228918 PHLDA3Q9Y5J5 127 aa12.3□□□□□ -0.44
LTBR-201ENST00000228918 CELSR1Q9NYQ6 3014 aa12.29□□□□□ -0.44
LTBR-201ENST00000228918 F6UB75 175 aa12.29□□□□□ -0.44
LTBR-201ENST00000228918 SLC25A16P16260 332 aa12.29□□□□□ -0.44
LTBR-201ENST00000228918 ITPR1Q14643 2758 aa12.29□□□□□ -0.44
LTBR-201ENST00000228918 PRORYQ9H606 182 aa12.29□□□□□ -0.44
LTBR-201ENST00000228918 C14orf178Q8N769 122 aaPredicted RBP12.28□□□□□ -0.44
LTBR-201ENST00000228918 C10orf105Q8TEF2 133 aa12.28□□□□□ -0.44
LTBR-201ENST00000228918 TOMM6Q96B49 74 aa12.28□□□□□ -0.44
LTBR-201ENST00000228918 RPL39LQ96EH5 51 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms