RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 TMEM78Q5T7P6 136 aa13.62□□□□□ -0.23
CDKN1B-201ENST00000228872 PPDPFLQ8WWR9 84 aa13.62□□□□□ -0.23
CDKN1B-201ENST00000228872 IGKV3D-20A0A0C4DH25 116 aa13.61□□□□□ -0.23
CDKN1B-201ENST00000228872 ZFP2Q6ZN57 461 aa13.61□□□□□ -0.23
CDKN1B-201ENST00000228872 LOC107984156A0A0G2JMH3 177 aa13.61□□□□□ -0.23
CDKN1B-201ENST00000228872 GRNP28799 593 aaKnown RBP13.61□□□□□ -0.23
CDKN1B-201ENST00000228872 UBE2D1P51668 147 aa13.61□□□□□ -0.23
CDKN1B-201ENST00000228872 SFTA2Q6UW10 78 aa13.61□□□□□ -0.23
CDKN1B-201ENST00000228872 ARL17AQ8IVW1 177 aa13.61□□□□□ -0.23
CDKN1B-201ENST00000228872 LINC01560Q8TB33 94 aa13.61□□□□□ -0.23
CDKN1B-201ENST00000228872 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.6□□□□□ -0.23
CDKN1B-201ENST00000228872 A6NJY4 79 aa13.6□□□□□ -0.23
CDKN1B-201ENST00000228872 PRAC2D3DTV9 90 aa13.6□□□□□ -0.23
CDKN1B-201ENST00000228872 CD3EP07766 207 aa13.6□□□□□ -0.23
CDKN1B-201ENST00000228872 FANCD2OSQ96PS1 177 aa13.6□□□□□ -0.23
CDKN1B-201ENST00000228872 PKD1L2Q7Z442 2459 aa13.6□□□□□ -0.23
CDKN1B-201ENST00000228872 E7EQL1 145 aa13.6□□□□□ -0.23
CDKN1B-201ENST00000228872 UBE2D3P61077 147 aa13.6□□□□□ -0.23
CDKN1B-201ENST00000228872 UBE2D2P62837 147 aa13.6□□□□□ -0.23
CDKN1B-201ENST00000228872 C11orf21Q9P2W6 132 aa13.6□□□□□ -0.23
CDKN1B-201ENST00000228872 UFC1Q9Y3C8 167 aa13.6□□□□□ -0.23
CDKN1B-201ENST00000228872 ANKHD1Q8IWZ3 2542 aaKnown RBP13.6□□□□□ -0.23
CDKN1B-201ENST00000228872 LINC01548A6NM66 108 aa13.59□□□□□ -0.23
CDKN1B-201ENST00000228872 TEN1Q86WV5 123 aa13.59□□□□□ -0.23
CDKN1B-201ENST00000228872 DYNLRB1Q9NP97 96 aa13.59□□□□□ -0.23
CDKN1B-201ENST00000228872 IGLV11-55A0A075B6I3 123 aa13.59□□□□□ -0.23
CDKN1B-201ENST00000228872 PRADC1Q9BSG0 188 aa13.58□□□□□ -0.23
CDKN1B-201ENST00000228872 DCHS2Q6V1P9 2916 aa13.58□□□□□ -0.23
CDKN1B-201ENST00000228872 TPRP12270 2363 aaKnown RBP13.58□□□□□ -0.24
CDKN1B-201ENST00000228872 TIMM23O14925 209 aa13.58□□□□□ -0.24
CDKN1B-201ENST00000228872 IGHV3-23P01764 117 aa13.58□□□□□ -0.24
CDKN1B-201ENST00000228872 NEXN-AS1Q8NBZ9 246 aa13.57□□□□□ -0.24
CDKN1B-201ENST00000228872 PLEKHB2Q96CS7 222 aa13.57□□□□□ -0.24
CDKN1B-201ENST00000228872 C21orf62Q9NYP8 219 aa13.57□□□□□ -0.24
CDKN1B-201ENST00000228872 IGHV7-4-1A0A0J9YVY3 117 aa13.57□□□□□ -0.24
CDKN1B-201ENST00000228872 PRSS29PA6NIE9 313 aa13.57□□□□□ -0.24
CDKN1B-201ENST00000228872 ZNF815PA8K554 130 aa13.57□□□□□ -0.24
CDKN1B-201ENST00000228872 LY6LH3BQJ8 138 aa13.57□□□□□ -0.24
CDKN1B-201ENST00000228872 SCGB3A1Q96QR1 104 aa13.57□□□□□ -0.24
CDKN1B-201ENST00000228872 SMIM2Q9BVW6 85 aa13.57□□□□□ -0.24
CDKN1B-201ENST00000228872 KLK15Q9H2R5 256 aa13.57□□□□□ -0.24
CDKN1B-201ENST00000228872 NBR2O15453 112 aa13.57□□□□□ -0.24
CDKN1B-201ENST00000228872 OR11H6Q8NGC7 330 aa13.57□□□□□ -0.24
CDKN1B-201ENST00000228872 ANAPC13Q9BS18 74 aa13.57□□□□□ -0.24
CDKN1B-201ENST00000228872 VCX2Q9H322 139 aa13.57□□□□□ -0.24
CDKN1B-201ENST00000228872 RALYQ9UKM9 306 aaKnown RBP13.57□□□□□ -0.24
CDKN1B-201ENST00000228872 SS18L2Q9UHA2 77 aa13.56□□□□□ -0.24
CDKN1B-201ENST00000228872 ABCA4P78363 2273 aa13.56□□□□□ -0.24
CDKN1B-201ENST00000228872 GNLYP22749 145 aa13.56□□□□□ -0.24
CDKN1B-201ENST00000228872 LYRM7Q5U5X0 104 aa13.56□□□□□ -0.24
CDKN1B-201ENST00000228872 TOMM6Q96B49 74 aa13.56□□□□□ -0.24
CDKN1B-201ENST00000228872 B9A039 149 aa13.55□□□□□ -0.24
CDKN1B-201ENST00000228872 CD7P09564 240 aa13.55□□□□□ -0.24
CDKN1B-201ENST00000228872 SRSF9Q13242 221 aaKnown RBP eCLIP13.55□□□□□ -0.24
CDKN1B-201ENST00000228872 SCGB1D4Q6XE38 83 aa13.55□□□□□ -0.24
CDKN1B-201ENST00000228872 TACC2O95359 2948 aa13.55□□□□□ -0.24
CDKN1B-201ENST00000228872 COL6A6A6NMZ7 2263 aa13.55□□□□□ -0.24
CDKN1B-201ENST00000228872 TCL1BO95988 128 aa13.55□□□□□ -0.24
CDKN1B-201ENST00000228872 ZNF688P0C7X2 276 aa13.55□□□□□ -0.24
CDKN1B-201ENST00000228872 SBSPONQ8IVN8 264 aa13.55□□□□□ -0.24
CDKN1B-201ENST00000228872 RNF182Q8N6D2 247 aa13.55□□□□□ -0.24
CDKN1B-201ENST00000228872 IGHV3OR16-8A0A075B7F1 116 aa13.54□□□□□ -0.24
CDKN1B-201ENST00000228872 RBAKDNA6NC62 111 aa13.54□□□□□ -0.24
CDKN1B-201ENST00000228872 COX6B1P14854 86 aa13.54□□□□□ -0.24
CDKN1B-201ENST00000228872 SLC25A16P16260 332 aa13.54□□□□□ -0.24
CDKN1B-201ENST00000228872 ORMDL2Q53FV1 153 aa13.54□□□□□ -0.24
CDKN1B-201ENST00000228872 SPANXN1Q5VSR9 72 aa13.53□□□□□ -0.24
CDKN1B-201ENST00000228872 IGFBPL1Q8WX77 278 aa13.53□□□□□ -0.24
CDKN1B-201ENST00000228872 IGHV4-4A0A075B6R2 117 aa13.53□□□□□ -0.24
CDKN1B-201ENST00000228872 A8MWV9 139 aa13.53□□□□□ -0.24
CDKN1B-201ENST00000228872 CTSGP08311 255 aa13.53□□□□□ -0.24
CDKN1B-201ENST00000228872 ZFAND6Q6FIF0 208 aa13.53□□□□□ -0.24
CDKN1B-201ENST00000228872 ITLN2Q8WWU7 325 aaPredicted RBP13.53□□□□□ -0.24
CDKN1B-201ENST00000228872 BAALCQ8WXS3 180 aa13.53□□□□□ -0.24
CDKN1B-201ENST00000228872 RASL10AQ92737 203 aa13.53□□□□□ -0.24
CDKN1B-201ENST00000228872 NDUFA11Q86Y39 141 aa13.52□□□□□ -0.24
CDKN1B-201ENST00000228872 KIR2DL4Q99706 377 aa13.52□□□□□ -0.24
CDKN1B-201ENST00000228872 AGPAT4-IT1Q9H0P7 198 aa13.52□□□□□ -0.24
CDKN1B-201ENST00000228872 ONECUT1Q9UBC0 465 aa13.52□□□□□ -0.24
CDKN1B-201ENST00000228872 HRNRQ86YZ3 2850 aaPredicted RBP13.52□□□□□ -0.25
CDKN1B-201ENST00000228872 GAGE5Q13069 117 aa13.52□□□□□ -0.25
CDKN1B-201ENST00000228872 GAGE6Q13070 117 aa13.52□□□□□ -0.25
CDKN1B-201ENST00000228872 NPBQ8NG41 125 aa13.52□□□□□ -0.25
CDKN1B-201ENST00000228872 SLC50A1Q9BRV3 221 aa13.52□□□□□ -0.25
CDKN1B-201ENST00000228872 ANKRD29Q8N6D5 301 aa13.51□□□□□ -0.25
CDKN1B-201ENST00000228872 TRBV20-1A0A075B6N2 111 aa13.51□□□□□ -0.25
CDKN1B-201ENST00000228872 IGHV3-35A0A0C4DH35 117 aa13.5□□□□□ -0.25
CDKN1B-201ENST00000228872 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.5□□□□□ -0.25
CDKN1B-201ENST00000228872 HIVEP3Q5T1R4 2406 aa13.5□□□□□ -0.25
CDKN1B-201ENST00000228872 H3BVH4 76 aa13.5□□□□□ -0.25
CDKN1B-201ENST00000228872 NDPQ00604 133 aa13.5□□□□□ -0.25
CDKN1B-201ENST00000228872 Q6ZQT7 251 aa13.5□□□□□ -0.25
CDKN1B-201ENST00000228872 TEX29Q8N6K0 151 aa13.5□□□□□ -0.25
CDKN1B-201ENST00000228872 KLHL30-AS1Q8NEE0 82 aa13.5□□□□□ -0.25
CDKN1B-201ENST00000228872 CITED1Q99966 193 aa13.5□□□□□ -0.25
CDKN1B-201ENST00000228872 SUMO2P61956 95 aaKnown RBP13.49□□□□□ -0.25
CDKN1B-201ENST00000228872 TMEM262E9PQX1 116 aa13.49□□□□□ -0.25
CDKN1B-201ENST00000228872 C2orf66Q6UXQ4 117 aa13.49□□□□□ -0.25
CDKN1B-201ENST00000228872 LYNX1G3V0Z9 82 aa13.48□□□□□ -0.25
CDKN1B-201ENST00000228872 SCGB2A1O75556 95 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms