RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 COL4A2P08572 1712 aa9.07□□□□□ -0.96
NOD1-201ENST00000222823 UBE2V1Q13404 147 aa9.07□□□□□ -0.96
NOD1-201ENST00000222823 ASPHD1Q5U4P2 390 aa9.07□□□□□ -0.96
NOD1-201ENST00000222823 Q6ZWC4 215 aa9.07□□□□□ -0.96
NOD1-201ENST00000222823 MRPL52Q86TS9 123 aaKnown RBP9.07□□□□□ -0.96
NOD1-201ENST00000222823 CHD8Q9HCK8 2581 aa9.07□□□□□ -0.96
NOD1-201ENST00000222823 TRAV8-4A0A0B4J246 113 aa9.07□□□□□ -0.96
NOD1-201ENST00000222823 TRAV26-2A0A0B4J265 109 aa9.07□□□□□ -0.96
NOD1-201ENST00000222823 PMVKQ15126 192 aa9.07□□□□□ -0.96
NOD1-201ENST00000222823 CENPVL3A0A0U1RRI6 287 aa9.06□□□□□ -0.96
NOD1-201ENST00000222823 EREGO14944 169 aa9.06□□□□□ -0.96
NOD1-201ENST00000222823 NPYP01303 97 aa9.06□□□□□ -0.96
NOD1-201ENST00000222823 IGLC2P0DOY2 106 aa9.06□□□□□ -0.96
NOD1-201ENST00000222823 IGLC3P0DOY3 106 aa9.06□□□□□ -0.96
NOD1-201ENST00000222823 CFHR3Q02985 330 aa9.06□□□□□ -0.96
NOD1-201ENST00000222823 UBE2DNLQ8IWF7 75 aa9.06□□□□□ -0.96
NOD1-201ENST00000222823 SIGLEC8Q9NYZ4 499 aa9.06□□□□□ -0.96
NOD1-201ENST00000222823 I3L3M4 83 aa9.06□□□□□ -0.96
NOD1-201ENST00000222823 HLA-DMBP28068 263 aa9.06□□□□□ -0.96
NOD1-201ENST00000222823 SMIM2Q9BVW6 85 aa9.06□□□□□ -0.96
NOD1-201ENST00000222823 ATG2AQ2TAZ0 1938 aa9.06□□□□□ -0.96
NOD1-201ENST00000222823 LEPROTO15243 131 aa9.06□□□□□ -0.96
NOD1-201ENST00000222823 C2orf82Q6UX34 121 aa9.06□□□□□ -0.96
NOD1-201ENST00000222823 ZNF295-AS1Q8N0V1 137 aa9.06□□□□□ -0.96
NOD1-201ENST00000222823 AGPAT4-IT1Q9H0P7 198 aa9.06□□□□□ -0.96
NOD1-201ENST00000222823 PLXNB1O43157 2135 aa9.06□□□□□ -0.96
NOD1-201ENST00000222823 IGHV1-24A0A0C4DH33 117 aa9.05□□□□□ -0.96
NOD1-201ENST00000222823 AZU1P20160 251 aa9.05□□□□□ -0.96
NOD1-201ENST00000222823 DEFB112Q30KQ8 113 aa9.05□□□□□ -0.96
NOD1-201ENST00000222823 ZNRF2Q8NHG8 242 aa9.05□□□□□ -0.96
NOD1-201ENST00000222823 TMEM141Q96I45 108 aa9.05□□□□□ -0.96
NOD1-201ENST00000222823 GAGE12BA1L429 117 aa9.05□□□□□ -0.96
NOD1-201ENST00000222823 GAGE7O76087 117 aa9.05□□□□□ -0.96
NOD1-201ENST00000222823 IGHV4-59P01825 116 aa9.05□□□□□ -0.96
NOD1-201ENST00000222823 P0C879 139 aa9.05□□□□□ -0.96
NOD1-201ENST00000222823 GAGE12FP0CL80 117 aa9.05□□□□□ -0.96
NOD1-201ENST00000222823 GAGE12GP0CL81 117 aa9.05□□□□□ -0.96
NOD1-201ENST00000222823 GAGE12IP0CL82 117 aa9.05□□□□□ -0.96
NOD1-201ENST00000222823 IGHV4-61A0A0C4DH41 118 aa9.05□□□□□ -0.96
NOD1-201ENST00000222823 H3BUA1 57 aa9.05□□□□□ -0.96
NOD1-201ENST00000222823 HOXB4P17483 251 aaPredicted RBP9.05□□□□□ -0.96
NOD1-201ENST00000222823 IGKV1-17P01599 117 aa9.05□□□□□ -0.96
NOD1-201ENST00000222823 F5H768 121 aa9.04□□□□□ -0.96
NOD1-201ENST00000222823 K7EN84 100 aa9.04□□□□□ -0.96
NOD1-201ENST00000222823 LTAP01374 205 aa9.04□□□□□ -0.96
NOD1-201ENST00000222823 IGLL1P15814 213 aa9.04□□□□□ -0.96
NOD1-201ENST00000222823 DAZAP2Q15038 168 aaPredicted RBP9.04□□□□□ -0.96
NOD1-201ENST00000222823 COA6Q5JTJ3 125 aaKnown RBP9.04□□□□□ -0.96
NOD1-201ENST00000222823 ATP6V0BQ99437 205 aa9.04□□□□□ -0.96
NOD1-201ENST00000222823 CHD7Q9P2D1 2997 aa9.04□□□□□ -0.96
NOD1-201ENST00000222823 TRBV25-1A0A075B6N4 114 aa9.04□□□□□ -0.96
NOD1-201ENST00000222823 F6UB75 175 aa9.04□□□□□ -0.96
NOD1-201ENST00000222823 DAD1P61803 113 aa9.04□□□□□ -0.96
NOD1-201ENST00000222823 SEM1Q6ZVN7 128 aa9.04□□□□□ -0.96
NOD1-201ENST00000222823 NEGR1Q7Z3B1 354 aa9.04□□□□□ -0.96
NOD1-201ENST00000222823 IGFBPL1Q8WX77 278 aa9.04□□□□□ -0.96
NOD1-201ENST00000222823 MKI67P46013 3256 aaKnown RBP9.04□□□□□ -0.96
NOD1-201ENST00000222823 LGALS9BQ3B8N2 356 aa9.04□□□□□ -0.96
NOD1-201ENST00000222823 LGALS9CQ6DKI2 356 aa9.04□□□□□ -0.96
NOD1-201ENST00000222823 DYNAPQ8N1N2 210 aa9.04□□□□□ -0.96
NOD1-201ENST00000222823 MRPL35Q9NZE8 188 aaKnown RBP9.04□□□□□ -0.96
NOD1-201ENST00000222823 GAGE2BQ13066 116 aa9.03□□□□□ -0.96
NOD1-201ENST00000222823 GAGE2EQ4V326 116 aa9.03□□□□□ -0.96
NOD1-201ENST00000222823 GAGE2DQ9UEU5 116 aa9.03□□□□□ -0.96
NOD1-201ENST00000222823 IGHV7-81A0A0B4J1V7 117 aa9.03□□□□□ -0.96
NOD1-201ENST00000222823 SNHG12Q9BXW3 62 aa9.03□□□□□ -0.96
NOD1-201ENST00000222823 LAMTOR3Q9UHA4 124 aa9.03□□□□□ -0.96
NOD1-201ENST00000222823 VPREB3Q9UKI3 123 aa9.03□□□□□ -0.96
NOD1-201ENST00000222823 COX11Q9Y6N1 276 aa9.03□□□□□ -0.96
NOD1-201ENST00000222823 TRAV8-3A0A0A6YYJ7 113 aa9.03□□□□□ -0.96
NOD1-201ENST00000222823 IGHV3-38A0A0C4DH36 116 aa9.03□□□□□ -0.96
NOD1-201ENST00000222823 Q71RC1 249 aaPredicted RBP9.03□□□□□ -0.96
NOD1-201ENST00000222823 F8VRH5 84 aa9.03□□□□□ -0.96
NOD1-201ENST00000222823 K7EIM0 57 aa9.03□□□□□ -0.96
NOD1-201ENST00000222823 EGR2P11161 476 aaPredicted RBP9.02□□□□□ -0.96
NOD1-201ENST00000222823 LENEPQ9Y5L5 61 aa9.02□□□□□ -0.96
NOD1-201ENST00000222823 VWC2LB2RUY7 222 aa9.02□□□□□ -0.97
NOD1-201ENST00000222823 C9JAW5 83 aa9.02□□□□□ -0.97
NOD1-201ENST00000222823 WISP2O76076 250 aa9.02□□□□□ -0.97
NOD1-201ENST00000222823 HLA-DRB4P13762 266 aa9.02□□□□□ -0.97
NOD1-201ENST00000222823 HLA-DRB4X5D2U9 266 aa9.02□□□□□ -0.97
NOD1-201ENST00000222823 PSCAO43653 123 aa9.01□□□□□ -0.97
NOD1-201ENST00000222823 LGALS1P09382 135 aaKnown RBP9.01□□□□□ -0.97
NOD1-201ENST00000222823 BLCAPP62952 87 aa9.01□□□□□ -0.97
NOD1-201ENST00000222823 TMEM243Q9BU79 118 aa9.01□□□□□ -0.97
NOD1-201ENST00000222823 I3L2K1 104 aa9.01□□□□□ -0.97
NOD1-201ENST00000222823 HOXD3P31249 432 aaPredicted RBP9.01□□□□□ -0.97
NOD1-201ENST00000222823 ANAPC13Q9BS18 74 aa9.01□□□□□ -0.97
NOD1-201ENST00000222823 C20orf78Q9BR46 151 aa9.01□□□□□ -0.97
NOD1-201ENST00000222823 IGHV4-30-2A0A087WSY4 118 aa9.01□□□□□ -0.97
NOD1-201ENST00000222823 FOXE3Q13461 319 aa9.01□□□□□ -0.97
NOD1-201ENST00000222823 OCIAD2Q56VL3 154 aa9.01□□□□□ -0.97
NOD1-201ENST00000222823 INS-IGF2F8WCM5 200 aa9□□□□□ -0.97
NOD1-201ENST00000222823 COX8AP10176 69 aa9□□□□□ -0.97
NOD1-201ENST00000222823 BRWD1-AS2P59051 145 aa9□□□□□ -0.97
NOD1-201ENST00000222823 PATE2Q6UY27 113 aa9□□□□□ -0.97
NOD1-201ENST00000222823 KMT2EQ8IZD2 1858 aa9□□□□□ -0.97
NOD1-201ENST00000222823 TLN2Q9Y4G6 2542 aa9□□□□□ -0.97
NOD1-201ENST00000222823 C5orf42Q9H799 3197 aa9□□□□□ -0.97
NOD1-201ENST00000222823 IGLV11-55A0A075B6I3 123 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms