RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 RNASE4P34096 147 aaKnown RBP13.23□□□□□ -0.29
GCDH-201ENST00000222214 LEPP41159 167 aa13.23□□□□□ -0.29
GCDH-201ENST00000222214 ASIPP42127 132 aa13.23□□□□□ -0.29
GCDH-201ENST00000222214 SPANXN1Q5VSR9 72 aa13.23□□□□□ -0.29
GCDH-201ENST00000222214 EBLN2Q6P2I7 272 aa13.23□□□□□ -0.29
GCDH-201ENST00000222214 C20orf144Q9BQM9 153 aa13.23□□□□□ -0.29
GCDH-201ENST00000222214 TRAV2A0A0B4J234 112 aa13.23□□□□□ -0.29
GCDH-201ENST00000222214 CRXO43186 299 aaPredicted RBP13.23□□□□□ -0.29
GCDH-201ENST00000222214 ZNF688P0C7X2 276 aa13.23□□□□□ -0.29
GCDH-201ENST00000222214 DEFB1P60022 68 aa13.23□□□□□ -0.29
GCDH-201ENST00000222214 TCTEX1D4Q5JR98 221 aa13.23□□□□□ -0.29
GCDH-201ENST00000222214 PSMG4Q5JS54 123 aa13.23□□□□□ -0.29
GCDH-201ENST00000222214 OR11H1Q8NG94 326 aa13.23□□□□□ -0.29
GCDH-201ENST00000222214 OR1N2Q8NGR9 330 aa13.23□□□□□ -0.29
GCDH-201ENST00000222214 OR10AG1Q8NH19 301 aa13.23□□□□□ -0.29
GCDH-201ENST00000222214 TMEM160Q9NX00 188 aa13.23□□□□□ -0.29
GCDH-201ENST00000222214 A0A0J9YX75 114 aa13.22□□□□□ -0.29
GCDH-201ENST00000222214 J3KRW8 73 aa13.22□□□□□ -0.29
GCDH-201ENST00000222214 TCF21O43680 179 aa13.22□□□□□ -0.29
GCDH-201ENST00000222214 S100A4P26447 101 aaKnown RBP13.22□□□□□ -0.29
GCDH-201ENST00000222214 SIGLEC8Q9NYZ4 499 aa13.22□□□□□ -0.29
GCDH-201ENST00000222214 MXRA5Q9NR99 2828 aa13.22□□□□□ -0.29
GCDH-201ENST00000222214 H3BVH4 76 aa13.21□□□□□ -0.29
GCDH-201ENST00000222214 DUSP14O95147 198 aaKnown RBP13.21□□□□□ -0.29
GCDH-201ENST00000222214 TFPI2P48307 235 aa13.21□□□□□ -0.29
GCDH-201ENST00000222214 SLURP1P55000 103 aa13.21□□□□□ -0.29
GCDH-201ENST00000222214 NDUFAF3Q9BU61 184 aa13.21□□□□□ -0.29
GCDH-201ENST00000222214 IFI27P40305 119 aaPredicted RBP13.21□□□□□ -0.29
GCDH-201ENST00000222214 CTAG1AP78358 180 aa13.21□□□□□ -0.29
GCDH-201ENST00000222214 ANXA2RQ3ZCQ2 193 aa13.21□□□□□ -0.29
GCDH-201ENST00000222214 KHDC1LQ5JSQ8 128 aa13.21□□□□□ -0.29
GCDH-201ENST00000222214 OR9G4Q8NGQ1 327 aa13.21□□□□□ -0.29
GCDH-201ENST00000222214 MAP1LC3AQ9H492 121 aa13.21□□□□□ -0.29
GCDH-201ENST00000222214 SELENOKQ9Y6D0 94 aa13.21□□□□□ -0.29
GCDH-201ENST00000222214 C20orf202A1L168 122 aa13.2□□□□□ -0.3
GCDH-201ENST00000222214 TSPOP30536 169 aa13.2□□□□□ -0.3
GCDH-201ENST00000222214 Q6ZQT7 251 aa13.2□□□□□ -0.3
GCDH-201ENST00000222214 KLHL30-AS1Q8NEE0 82 aa13.2□□□□□ -0.3
GCDH-201ENST00000222214 MAP1LC3CQ9BXW4 147 aa13.2□□□□□ -0.3
GCDH-201ENST00000222214 NPYP01303 97 aa13.2□□□□□ -0.3
GCDH-201ENST00000222214 RNASE1P07998 156 aaKnown RBP13.2□□□□□ -0.3
GCDH-201ENST00000222214 DEFB136Q30KP8 78 aa13.2□□□□□ -0.3
GCDH-201ENST00000222214 FOXI2Q6ZQN5 318 aa13.2□□□□□ -0.3
GCDH-201ENST00000222214 C18orf65Q6ZTR6 163 aa13.2□□□□□ -0.3
GCDH-201ENST00000222214 SCRT2Q9NQ03 307 aa13.2□□□□□ -0.3
GCDH-201ENST00000222214 ESM1Q9NQ30 184 aa13.2□□□□□ -0.3
GCDH-201ENST00000222214 FAM159AQ6UWV7 190 aa13.19□□□□□ -0.3
GCDH-201ENST00000222214 PAM16Q9Y3D7 125 aa13.19□□□□□ -0.3
GCDH-201ENST00000222214 LOC389332A0A1B0GUA5 103 aa13.18□□□□□ -0.3
GCDH-201ENST00000222214 C7orf71A4D174 169 aa13.18□□□□□ -0.3
GCDH-201ENST00000222214 SYS1-DBNDD2H3BUS1 97 aa13.18□□□□□ -0.3
GCDH-201ENST00000222214 EVI2AP22794 236 aa13.18□□□□□ -0.3
GCDH-201ENST00000222214 ADAMTSL5Q6ZMM2 481 aa13.18□□□□□ -0.3
GCDH-201ENST00000222214 C16orf95Q9H693 158 aa13.18□□□□□ -0.3
GCDH-201ENST00000222214 NXT2Q9NPJ8 142 aaKnown RBP13.18□□□□□ -0.3
GCDH-201ENST00000222214 PHLDA3Q9Y5J5 127 aa13.18□□□□□ -0.3
GCDH-201ENST00000222214 TDRG1Q3Y452 100 aa13.18□□□□□ -0.3
GCDH-201ENST00000222214 PET117Q6UWS5 81 aa13.18□□□□□ -0.3
GCDH-201ENST00000222214 C14orf144Q96I85 54 aa13.18□□□□□ -0.3
GCDH-201ENST00000222214 NBPF19A0A087WUL8 3843 aa13.17□□□□□ -0.3
GCDH-201ENST00000222214 CCDC168Q8NDH2 2452 aa13.17□□□□□ -0.3
GCDH-201ENST00000222214 PDZD2O15018 2839 aa13.17□□□□□ -0.3
GCDH-201ENST00000222214 LINC01546A6NGU7 62 aa13.17□□□□□ -0.3
GCDH-201ENST00000222214 SMKR1H3BMG3 65 aa13.17□□□□□ -0.3
GCDH-201ENST00000222214 TNFRSF6BO95407 300 aa13.17□□□□□ -0.3
GCDH-201ENST00000222214 NCR2O95944 276 aa13.17□□□□□ -0.3
GCDH-201ENST00000222214 DEFB125Q8N687 156 aa13.17□□□□□ -0.3
GCDH-201ENST00000222214 ZNF418Q8TF45 676 aaPredicted RBP13.17□□□□□ -0.3
GCDH-201ENST00000222214 MRAP2Q96G30 205 aa13.17□□□□□ -0.3
GCDH-201ENST00000222214 HELZ2Q9BYK8 2649 aaKnown RBP13.17□□□□□ -0.3
GCDH-201ENST00000222214 FLNAP21333 2647 aaKnown RBP13.17□□□□□ -0.3
GCDH-201ENST00000222214 CDKN1BP46527 198 aa13.16□□□□□ -0.3
GCDH-201ENST00000222214 PRSS47A8MTI9 375 aa13.16□□□□□ -0.3
GCDH-201ENST00000222214 KIR3DS1Q14943 382 aa13.16□□□□□ -0.3
GCDH-201ENST00000222214 MIEN1Q9BRT3 115 aa13.16□□□□□ -0.3
GCDH-201ENST00000222214 HBDP02042 147 aa13.15□□□□□ -0.3
GCDH-201ENST00000222214 SPATA45Q537H7 98 aa13.15□□□□□ -0.3
GCDH-201ENST00000222214 SPATA12Q7Z6I5 190 aa13.15□□□□□ -0.3
GCDH-201ENST00000222214 DYNLRB2Q8TF09 96 aa13.15□□□□□ -0.3
GCDH-201ENST00000222214 DLX4Q92988 240 aaPredicted RBP13.15□□□□□ -0.3
GCDH-201ENST00000222214 ZNF747Q9BV97 191 aa13.15□□□□□ -0.3
GCDH-201ENST00000222214 DPH3P1Q9H4G8 78 aa13.15□□□□□ -0.3
GCDH-201ENST00000222214 NXPH4O95158 308 aa13.14□□□□□ -0.31
GCDH-201ENST00000222214 RNASE3P12724 160 aaKnown RBP13.14□□□□□ -0.31
GCDH-201ENST00000222214 OR2K2Q8NGT1 345 aa13.14□□□□□ -0.31
GCDH-201ENST00000222214 TIMM8BQ9Y5J9 83 aaPredicted RBP13.14□□□□□ -0.31
GCDH-201ENST00000222214 TLN2Q9Y4G6 2542 aa13.14□□□□□ -0.31
GCDH-201ENST00000222214 ZNF469Q96JG9 3925 aaPredicted RBP13.14□□□□□ -0.31
GCDH-201ENST00000222214 TRAV9-2A0A087WT02 112 aa13.14□□□□□ -0.31
GCDH-201ENST00000222214 M0R381 172 aa13.14□□□□□ -0.31
GCDH-201ENST00000222214 ZNF705AQ6ZN79 300 aaPredicted RBP13.14□□□□□ -0.31
GCDH-201ENST00000222214 AP1S3Q96PC3 154 aa13.14□□□□□ -0.31
GCDH-201ENST00000222214 GNRH2O43555 120 aa13.13□□□□□ -0.31
GCDH-201ENST00000222214 LBHQ53QV2 105 aaPredicted RBP13.13□□□□□ -0.31
GCDH-201ENST00000222214 LINC00173Q6ZV60 143 aa13.13□□□□□ -0.31
GCDH-201ENST00000222214 A0A096LNJ9 63 aa13.12□□□□□ -0.31
GCDH-201ENST00000222214 TRAV12-3A0A0B4J271 114 aa13.12□□□□□ -0.31
GCDH-201ENST00000222214 HILS1P60008 231 aa13.12□□□□□ -0.31
GCDH-201ENST00000222214 FHL3Q13643 280 aa13.12□□□□□ -0.31
GCDH-201ENST00000222214 Q8N8P6 123 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms