RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 C1orf195Q5TG92 126 aa8.36□□□□□ -1.07
VPS18-201ENST00000220509 BRD3OSQ6XYD6 125 aa8.36□□□□□ -1.07
VPS18-201ENST00000220509 ASH1LQ9NR48 2969 aaKnown RBP8.36□□□□□ -1.07
VPS18-201ENST00000220509 ZNF502Q8TBZ5 544 aa8.36□□□□□ -1.07
VPS18-201ENST00000220509 TIRAPP58753 221 aa8.36□□□□□ -1.07
VPS18-201ENST00000220509 TTTY13Q9BZ97 58 aa8.36□□□□□ -1.07
VPS18-201ENST00000220509 SIGLEC8Q9NYZ4 499 aa8.36□□□□□ -1.07
VPS18-201ENST00000220509 LY96Q9Y6Y9 160 aa8.36□□□□□ -1.07
VPS18-201ENST00000220509 CKS2P33552 79 aa8.35□□□□□ -1.07
VPS18-201ENST00000220509 OR4X2Q8NGF9 303 aa8.35□□□□□ -1.07
VPS18-201ENST00000220509 COX8AP10176 69 aa8.35□□□□□ -1.07
VPS18-201ENST00000220509 EFNA4P52798 201 aa8.35□□□□□ -1.07
VPS18-201ENST00000220509 FOXE3Q13461 319 aa8.35□□□□□ -1.07
VPS18-201ENST00000220509 EEF1AKMT3Q96AZ1 226 aa8.35□□□□□ -1.07
VPS18-201ENST00000220509 SLC25A39Q9BZJ4 359 aaPredicted RBP8.35□□□□□ -1.07
VPS18-201ENST00000220509 TRAV4A0A0B4J268 109 aa8.35□□□□□ -1.07
VPS18-201ENST00000220509 M0R3E3 92 aa8.35□□□□□ -1.07
VPS18-201ENST00000220509 OR10J6PQ8NGY7 276 aa8.35□□□□□ -1.07
VPS18-201ENST00000220509 CHCHD5Q9BSY4 110 aa8.35□□□□□ -1.07
VPS18-201ENST00000220509 PRO0628Q9UI54 55 aa8.35□□□□□ -1.07
VPS18-201ENST00000220509 DSCAMO60469 2012 aa8.34□□□□□ -1.07
VPS18-201ENST00000220509 DOPEY1Q5JWR5 2465 aa8.34□□□□□ -1.07
VPS18-201ENST00000220509 ZNF503Q96F45 646 aa8.34□□□□□ -1.07
VPS18-201ENST00000220509 AJUBAQ96IF1 538 aa8.34□□□□□ -1.07
VPS18-201ENST00000220509 SMKR1H3BMG3 65 aa8.34□□□□□ -1.07
VPS18-201ENST00000220509 NCR2O95944 276 aa8.34□□□□□ -1.07
VPS18-201ENST00000220509 CRYGBP07316 175 aa8.34□□□□□ -1.07
VPS18-201ENST00000220509 MGPP08493 103 aa8.34□□□□□ -1.07
VPS18-201ENST00000220509 PRR20EP86478 221 aa8.34□□□□□ -1.07
VPS18-201ENST00000220509 PRR20CP86479 221 aa8.34□□□□□ -1.07
VPS18-201ENST00000220509 PRR20DP86480 221 aa8.34□□□□□ -1.07
VPS18-201ENST00000220509 PRR20BP86481 221 aa8.34□□□□□ -1.07
VPS18-201ENST00000220509 PRR20AP86496 221 aa8.34□□□□□ -1.07
VPS18-201ENST00000220509 GATD1Q8NB37 220 aa8.34□□□□□ -1.07
VPS18-201ENST00000220509 ZNF414Q96IQ9 312 aa8.34□□□□□ -1.07
VPS18-201ENST00000220509 IGKV3-20P01619 116 aa8.34□□□□□ -1.07
VPS18-201ENST00000220509 IGLV2-8P01709 118 aa8.34□□□□□ -1.07
VPS18-201ENST00000220509 IFI27P40305 119 aaPredicted RBP8.34□□□□□ -1.07
VPS18-201ENST00000220509 C15orf32Q32M92 178 aa8.34□□□□□ -1.07
VPS18-201ENST00000220509 IGFL4Q6B9Z1 124 aa8.34□□□□□ -1.07
VPS18-201ENST00000220509 PPDPFLQ8WWR9 84 aa8.34□□□□□ -1.07
VPS18-201ENST00000220509 PRB1P04280 392 aa8.33□□□□□ -1.08
VPS18-201ENST00000220509 ARMS2P0C7Q2 107 aa8.33□□□□□ -1.08
VPS18-201ENST00000220509 P0C879 139 aa8.33□□□□□ -1.08
VPS18-201ENST00000220509 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.33□□□□□ -1.08
VPS18-201ENST00000220509 BCL6BQ8N143 479 aaPredicted RBP8.33□□□□□ -1.08
VPS18-201ENST00000220509 FMC1Q96HJ9 113 aa8.33□□□□□ -1.08
VPS18-201ENST00000220509 TRGV9Q99603 122 aa8.33□□□□□ -1.08
VPS18-201ENST00000220509 OTORQ9NRC9 128 aa8.33□□□□□ -1.08
VPS18-201ENST00000220509 PVRIGQ6DKI7 326 aa8.33□□□□□ -1.08
VPS18-201ENST00000220509 GAGE2AQ6NT46 116 aa8.33□□□□□ -1.08
VPS18-201ENST00000220509 PCP2Q8IVA1 136 aa8.33□□□□□ -1.08
VPS18-201ENST00000220509 A0A1B0GUT8 65 aa8.33□□□□□ -1.08
VPS18-201ENST00000220509 ZNF329Q86UD4 541 aa8.33□□□□□ -1.08
VPS18-201ENST00000220509 MTORP42345 2549 aa8.33□□□□□ -1.08
VPS18-201ENST00000220509 TMEM89A2RUT3 159 aa8.32□□□□□ -1.08
VPS18-201ENST00000220509 ZNF688P0C7X2 276 aa8.32□□□□□ -1.08
VPS18-201ENST00000220509 C2orf91Q6ZV80 131 aa8.32□□□□□ -1.08
VPS18-201ENST00000220509 TCRAP04437 139 aa8.32□□□□□ -1.08
VPS18-201ENST00000220509 RITA1Q96K30 269 aa8.32□□□□□ -1.08
VPS18-201ENST00000220509 SLC25A2Q9BXI2 301 aa8.32□□□□□ -1.08
VPS18-201ENST00000220509 FLNCQ14315 2725 aa8.32□□□□□ -1.08
VPS18-201ENST00000220509 NDUFA7O95182 113 aa8.32□□□□□ -1.08
VPS18-201ENST00000220509 SAA4P35542 130 aa8.32□□□□□ -1.08
VPS18-201ENST00000220509 SORL1Q92673 2214 aa8.32□□□□□ -1.08
VPS18-201ENST00000220509 LOC107984156A0A0G2JMH3 177 aa8.31□□□□□ -1.08
VPS18-201ENST00000220509 MALP21145 153 aa8.31□□□□□ -1.08
VPS18-201ENST00000220509 CDSNQ15517 529 aa8.31□□□□□ -1.08
VPS18-201ENST00000220509 LINC00322Q6ZN03 302 aaPredicted RBP8.31□□□□□ -1.08
VPS18-201ENST00000220509 ARL17AQ8IVW1 177 aa8.31□□□□□ -1.08
VPS18-201ENST00000220509 CHCHD1Q96BP2 118 aaKnown RBP8.31□□□□□ -1.08
VPS18-201ENST00000220509 KLK15Q9H2R5 256 aa8.31□□□□□ -1.08
VPS18-201ENST00000220509 KAAG1Q9UBP8 84 aa8.31□□□□□ -1.08
VPS18-201ENST00000220509 D6R8Y8 96 aa8.31□□□□□ -1.08
VPS18-201ENST00000220509 SRD5A1P18405 259 aa8.31□□□□□ -1.08
VPS18-201ENST00000220509 IGKV2-40A0A087WW87 121 aaPredicted RBP8.31□□□□□ -1.08
VPS18-201ENST00000220509 IGKV2D-40P01614 121 aaPredicted RBP8.31□□□□□ -1.08
VPS18-201ENST00000220509 LINC00311Q8N616 119 aa8.31□□□□□ -1.08
VPS18-201ENST00000220509 C1orf159Q96HA4 380 aa8.31□□□□□ -1.08
VPS18-201ENST00000220509 ACANP16112 2415 aa8.31□□□□□ -1.08
VPS18-201ENST00000220509 NACAE9PAV3 2078 aa8.31□□□□□ -1.08
VPS18-201ENST00000220509 E7EUB6 86 aa8.3□□□□□ -1.08
VPS18-201ENST00000220509 M0R1W7 72 aa8.3□□□□□ -1.08
VPS18-201ENST00000220509 FHL3Q13643 280 aa8.3□□□□□ -1.08
VPS18-201ENST00000220509 Q6ZQT7 251 aa8.3□□□□□ -1.08
VPS18-201ENST00000220509 C1orf229Q6ZS94 237 aaPredicted RBP8.3□□□□□ -1.08
VPS18-201ENST00000220509 GTSF1Q8WW33 167 aa8.3□□□□□ -1.08
VPS18-201ENST00000220509 IGF2BP2-AS1Q96M15 143 aa8.3□□□□□ -1.08
VPS18-201ENST00000220509 Q8TAT8 98 aa8.3□□□□□ -1.08
VPS18-201ENST00000220509 PSMB2P49721 201 aa8.3□□□□□ -1.08
VPS18-201ENST00000220509 TRPT1Q86TN4 253 aaKnown RBP8.3□□□□□ -1.08
VPS18-201ENST00000220509 GTSCR1Q86UQ5 136 aa8.3□□□□□ -1.08
VPS18-201ENST00000220509 DTX2Q86UW9 622 aa8.3□□□□□ -1.08
VPS18-201ENST00000220509 AMN1Q8IY45 258 aa8.3□□□□□ -1.08
VPS18-201ENST00000220509 RNF5Q99942 180 aa8.3□□□□□ -1.08
VPS18-201ENST00000220509 ZNF256Q9Y2P7 627 aaPredicted RBP8.29□□□□□ -1.08
VPS18-201ENST00000220509 NDPQ00604 133 aa8.29□□□□□ -1.08
VPS18-201ENST00000220509 RUSC1-AS1Q66K80 236 aa8.29□□□□□ -1.08
VPS18-201ENST00000220509 DEFB104AQ8WTQ1 72 aa8.29□□□□□ -1.08
VPS18-201ENST00000220509 H3BUX3 64 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms