RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 MRPL53Q96EL3 112 aaKnown RBP12.93□□□□□ -0.34
CHGA-201ENST00000216492 SIGLEC8Q9NYZ4 499 aa12.93□□□□□ -0.34
CHGA-201ENST00000216492 OTOGQ6ZRI0 2925 aa12.92□□□□□ -0.34
CHGA-201ENST00000216492 CKS2P33552 79 aa12.92□□□□□ -0.34
CHGA-201ENST00000216492 HINT1P49773 126 aaPredicted RBP12.92□□□□□ -0.34
CHGA-201ENST00000216492 FOXE3Q13461 319 aa12.92□□□□□ -0.34
CHGA-201ENST00000216492 PEF1Q9UBV8 284 aaKnown RBP12.92□□□□□ -0.34
CHGA-201ENST00000216492 HIVEP2P31629 2446 aa12.92□□□□□ -0.34
CHGA-201ENST00000216492 LOC389332A0A1B0GUA5 103 aa12.92□□□□□ -0.34
CHGA-201ENST00000216492 ERCC8Q13216 396 aa12.92□□□□□ -0.34
CHGA-201ENST00000216492 LINC01559Q495D7 138 aa12.92□□□□□ -0.34
CHGA-201ENST00000216492 SLC25A34Q6PIV7 304 aa12.92□□□□□ -0.34
CHGA-201ENST00000216492 CNFNQ9BYD5 112 aa12.92□□□□□ -0.34
CHGA-201ENST00000216492 IGHV3-66A0A0C4DH42 116 aa12.91□□□□□ -0.34
CHGA-201ENST00000216492 MUC21A0A0G2JKD1 596 aa12.91□□□□□ -0.34
CHGA-201ENST00000216492 MUC21A0A140T8X8 626 aa12.91□□□□□ -0.34
CHGA-201ENST00000216492 NDUFA4O00483 81 aa12.91□□□□□ -0.34
CHGA-201ENST00000216492 MUC21Q5SSG8 566 aa12.91□□□□□ -0.34
CHGA-201ENST00000216492 RNF182Q8N6D2 247 aa12.91□□□□□ -0.34
CHGA-201ENST00000216492 PRAC2D3DTV9 90 aa12.9□□□□□ -0.34
CHGA-201ENST00000216492 ZNF207O43670 478 aaKnown RBP12.9□□□□□ -0.34
CHGA-201ENST00000216492 TCF21O43680 179 aa12.9□□□□□ -0.34
CHGA-201ENST00000216492 Q6ZSV7 163 aa12.9□□□□□ -0.34
CHGA-201ENST00000216492 ZNF418Q8TF45 676 aaPredicted RBP12.9□□□□□ -0.34
CHGA-201ENST00000216492 PPBPP02775 128 aa12.9□□□□□ -0.34
CHGA-201ENST00000216492 RBX1P62877 108 aa12.9□□□□□ -0.34
CHGA-201ENST00000216492 HIST1H1AQ02539 215 aaPredicted RBP12.9□□□□□ -0.34
CHGA-201ENST00000216492 TMEM78Q5T7P6 136 aa12.9□□□□□ -0.34
CHGA-201ENST00000216492 UNQ9165/PRO28630Q6UXU0 137 aa12.9□□□□□ -0.34
CHGA-201ENST00000216492 CDKN1BP46527 198 aa12.89□□□□□ -0.35
CHGA-201ENST00000216492 SCRT2Q9NQ03 307 aa12.89□□□□□ -0.35
CHGA-201ENST00000216492 U3KQE9 123 aa12.89□□□□□ -0.35
CHGA-201ENST00000216492 CUBNO60494 3623 aa12.89□□□□□ -0.35
CHGA-201ENST00000216492 ANK3Q12955 4377 aaKnown RBP12.89□□□□□ -0.35
CHGA-201ENST00000216492 MTORP42345 2549 aa12.89□□□□□ -0.35
CHGA-201ENST00000216492 IGHV3OR16-13A0A075B7E8 117 aa12.89□□□□□ -0.35
CHGA-201ENST00000216492 IGHV3-74A0A0B4J1X5 117 aa12.89□□□□□ -0.35
CHGA-201ENST00000216492 HBDP02042 147 aa12.89□□□□□ -0.35
CHGA-201ENST00000216492 C8orf86Q6ZUL3 223 aa12.89□□□□□ -0.35
CHGA-201ENST00000216492 RNF152Q8N8N0 203 aa12.89□□□□□ -0.35
CHGA-201ENST00000216492 ORAOV1Q8WV07 137 aa12.89□□□□□ -0.35
CHGA-201ENST00000216492 IGHV3-49A0A0A0MS15 119 aa12.88□□□□□ -0.35
CHGA-201ENST00000216492 UBE2E2Q96LR5 201 aa12.88□□□□□ -0.35
CHGA-201ENST00000216492 TRAV8-2A0A0B4J237 113 aa12.87□□□□□ -0.35
CHGA-201ENST00000216492 K7EP13 123 aa12.87□□□□□ -0.35
CHGA-201ENST00000216492 RNASE1P07998 156 aaKnown RBP12.87□□□□□ -0.35
CHGA-201ENST00000216492 FAM106AQ4KMX7 169 aa12.87□□□□□ -0.35
CHGA-201ENST00000216492 OR8A1Q8NGG7 326 aa12.87□□□□□ -0.35
CHGA-201ENST00000216492 MYOZ3Q8TDC0 251 aa12.87□□□□□ -0.35
CHGA-201ENST00000216492 MCRIP2Q9BUT9 160 aaKnown RBP12.87□□□□□ -0.35
CHGA-201ENST00000216492 AGPAT4-IT1Q9H0P7 198 aa12.87□□□□□ -0.35
CHGA-201ENST00000216492 MAP1LC3AQ9H492 121 aa12.87□□□□□ -0.35
CHGA-201ENST00000216492 A0A096LNJ9 63 aa12.87□□□□□ -0.35
CHGA-201ENST00000216492 NPYP01303 97 aa12.87□□□□□ -0.35
CHGA-201ENST00000216492 PMCHL2Q9BQD1 86 aa12.87□□□□□ -0.35
CHGA-201ENST00000216492 FLNBO75369 2602 aaKnown RBP12.86□□□□□ -0.35
CHGA-201ENST00000216492 HILS1P60008 231 aa12.86□□□□□ -0.35
CHGA-201ENST00000216492 ZNF575Q86XF7 245 aa12.86□□□□□ -0.35
CHGA-201ENST00000216492 C9orf47Q6ZRZ4 202 aa12.85□□□□□ -0.35
CHGA-201ENST00000216492 GPHB5Q86YW7 130 aa12.85□□□□□ -0.35
CHGA-201ENST00000216492 SMKR1H3BMG3 65 aa12.85□□□□□ -0.35
CHGA-201ENST00000216492 NCR2O95944 276 aa12.85□□□□□ -0.35
CHGA-201ENST00000216492 LGALS1P09382 135 aaKnown RBP12.85□□□□□ -0.35
CHGA-201ENST00000216492 LGALS9BQ3B8N2 356 aa12.85□□□□□ -0.35
CHGA-201ENST00000216492 LGALS9CQ6DKI2 356 aa12.85□□□□□ -0.35
CHGA-201ENST00000216492 C12orf54Q6X4T0 127 aa12.85□□□□□ -0.35
CHGA-201ENST00000216492 DPF1Q92782 380 aa12.85□□□□□ -0.35
CHGA-201ENST00000216492 RNF185Q96GF1 192 aa12.85□□□□□ -0.35
CHGA-201ENST00000216492 C16orf92Q96LL3 132 aa12.85□□□□□ -0.35
CHGA-201ENST00000216492 ZNF738Q8NE65 137 aa12.84□□□□□ -0.35
CHGA-201ENST00000216492 MSRB1Q9NZV6 116 aa12.84□□□□□ -0.35
CHGA-201ENST00000216492 INAFM1C9JVW0 142 aa12.84□□□□□ -0.35
CHGA-201ENST00000216492 SMIM15Q7Z3B0 74 aa12.84□□□□□ -0.35
CHGA-201ENST00000216492 COX11Q9Y6N1 276 aa12.84□□□□□ -0.35
CHGA-201ENST00000216492 IGKV3D-20A0A0C4DH25 116 aa12.83□□□□□ -0.36
CHGA-201ENST00000216492 COX8AP10176 69 aa12.83□□□□□ -0.36
CHGA-201ENST00000216492 PTTG1IPP53801 180 aa12.83□□□□□ -0.36
CHGA-201ENST00000216492 TM4SF20Q53R12 229 aa12.83□□□□□ -0.36
CHGA-201ENST00000216492 RNASE8Q8TDE3 154 aaKnown RBP12.83□□□□□ -0.36
CHGA-201ENST00000216492 GLMPQ8WWB7 406 aa12.83□□□□□ -0.36
CHGA-201ENST00000216492 NXT2Q9NPJ8 142 aaKnown RBP12.83□□□□□ -0.36
CHGA-201ENST00000216492 DAZ1Q9NQZ3 744 aaKnown RBP12.83□□□□□ -0.36
CHGA-201ENST00000216492 MPV17L2Q567V2 206 aa12.82□□□□□ -0.36
CHGA-201ENST00000216492 IFI27L1Q96BM0 104 aa12.82□□□□□ -0.36
CHGA-201ENST00000216492 JMJD8Q96S16 334 aa12.82□□□□□ -0.36
CHGA-201ENST00000216492 LENEPQ9Y5L5 61 aa12.82□□□□□ -0.36
CHGA-201ENST00000216492 LINC01546A6NGU7 62 aa12.82□□□□□ -0.36
CHGA-201ENST00000216492 K7EMT4 169 aa12.82□□□□□ -0.36
CHGA-201ENST00000216492 NUDT3O95989 172 aa12.82□□□□□ -0.36
CHGA-201ENST00000216492 TCTEX1D4Q5JR98 221 aa12.82□□□□□ -0.36
CHGA-201ENST00000216492 OR1N2Q8NGR9 330 aa12.82□□□□□ -0.36
CHGA-201ENST00000216492 TNFRSF6BO95407 300 aa12.81□□□□□ -0.36
CHGA-201ENST00000216492 CACNG7P62955 275 aa12.81□□□□□ -0.36
CHGA-201ENST00000216492 TP73-AS1Q9UF72 201 aa12.81□□□□□ -0.36
CHGA-201ENST00000216492 UBE2V1Q13404 147 aa12.81□□□□□ -0.36
CHGA-201ENST00000216492 LINC01006Q8NI28 216 aa12.81□□□□□ -0.36
CHGA-201ENST00000216492 C16orf95Q9H693 158 aa12.81□□□□□ -0.36
CHGA-201ENST00000216492 IGHV4OR15-8A0A075B7B6 117 aa12.8□□□□□ -0.36
CHGA-201ENST00000216492 A0A087WW49 117 aa12.8□□□□□ -0.36
CHGA-201ENST00000216492 IGHV7-4-1A0A0J9YVY3 117 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms