RNA–Protein interactions for RNA: ENST00000216274.9

RIPK3-201, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK3, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-201ENST00000216274 FOXE3Q13461 319 aa9.72□□□□□ -0.85
RIPK3-201ENST00000216274 TDRG1Q3Y452 100 aa9.72□□□□□ -0.85
RIPK3-201ENST00000216274 ZNF575Q86XF7 245 aa9.72□□□□□ -0.85
RIPK3-201ENST00000216274 AP5S1Q9NUS5 200 aa9.72□□□□□ -0.85
RIPK3-201ENST00000216274 IGKV3D-20A0A0C4DH25 116 aa9.71□□□□□ -0.86
RIPK3-201ENST00000216274 TRBV7-9A0A0J9YWB2 115 aa9.71□□□□□ -0.86
RIPK3-201ENST00000216274 PPBPP02775 128 aa9.71□□□□□ -0.86
RIPK3-201ENST00000216274 ID1P41134 155 aa9.71□□□□□ -0.86
RIPK3-201ENST00000216274 SSTP61278 116 aa9.71□□□□□ -0.86
RIPK3-201ENST00000216274 SPATA45Q537H7 98 aa9.71□□□□□ -0.86
RIPK3-201ENST00000216274 MRPL52Q86TS9 123 aaKnown RBP9.71□□□□□ -0.86
RIPK3-201ENST00000216274 TMEM158Q8WZ71 300 aa9.71□□□□□ -0.86
RIPK3-201ENST00000216274 MUC21A0A0G2JKD1 596 aa9.7□□□□□ -0.86
RIPK3-201ENST00000216274 MUC21A0A140T8X8 626 aa9.7□□□□□ -0.86
RIPK3-201ENST00000216274 CKS2P33552 79 aa9.7□□□□□ -0.86
RIPK3-201ENST00000216274 CACNG7P62955 275 aa9.7□□□□□ -0.86
RIPK3-201ENST00000216274 MUC21Q5SSG8 566 aa9.7□□□□□ -0.86
RIPK3-201ENST00000216274 KLHDC1Q8N7A1 406 aa9.7□□□□□ -0.86
RIPK3-201ENST00000216274 OR10AG1Q8NH19 301 aa9.7□□□□□ -0.86
RIPK3-201ENST00000216274 TRAV21A0A0B4J279 112 aa9.7□□□□□ -0.86
RIPK3-201ENST00000216274 SMIM15Q7Z3B0 74 aa9.7□□□□□ -0.86
RIPK3-201ENST00000216274 OR8A1Q8NGG7 326 aa9.7□□□□□ -0.86
RIPK3-201ENST00000216274 MAP1LC3CQ9BXW4 147 aa9.7□□□□□ -0.86
RIPK3-201ENST00000216274 ZNF702PQ9H963 129 aa9.7□□□□□ -0.86
RIPK3-201ENST00000216274 C11orf21Q9P2W6 132 aa9.7□□□□□ -0.86
RIPK3-201ENST00000216274 LAMTOR2Q9Y2Q5 125 aa9.7□□□□□ -0.86
RIPK3-201ENST00000216274 SYS1-DBNDD2H3BUS1 97 aa9.69□□□□□ -0.86
RIPK3-201ENST00000216274 CRXO43186 299 aaPredicted RBP9.69□□□□□ -0.86
RIPK3-201ENST00000216274 HOXA3O43365 443 aaPredicted RBP9.69□□□□□ -0.86
RIPK3-201ENST00000216274 LGALS1P09382 135 aaKnown RBP9.69□□□□□ -0.86
RIPK3-201ENST00000216274 PET117Q6UWS5 81 aa9.69□□□□□ -0.86
RIPK3-201ENST00000216274 ZNF705AQ6ZN79 300 aaPredicted RBP9.69□□□□□ -0.86
RIPK3-201ENST00000216274 C2orf88Q9BSF0 95 aa9.69□□□□□ -0.86
RIPK3-201ENST00000216274 TRAV9-2A0A087WT02 112 aa9.68□□□□□ -0.86
RIPK3-201ENST00000216274 MYOZ3Q8TDC0 251 aa9.68□□□□□ -0.86
RIPK3-201ENST00000216274 SIGLEC8Q9NYZ4 499 aa9.68□□□□□ -0.86
RIPK3-201ENST00000216274 ATRQ13535 2644 aa9.68□□□□□ -0.86
RIPK3-201ENST00000216274 M0R143 59 aa9.68□□□□□ -0.86
RIPK3-201ENST00000216274 SNAI2O43623 268 aa9.68□□□□□ -0.86
RIPK3-201ENST00000216274 RPLP1P05386 114 aaKnown RBP9.68□□□□□ -0.86
RIPK3-201ENST00000216274 TMEM86BQ8N661 226 aa9.68□□□□□ -0.86
RIPK3-201ENST00000216274 ZFAND2AQ8N6M9 145 aa9.68□□□□□ -0.86
RIPK3-201ENST00000216274 RNF185Q96GF1 192 aa9.68□□□□□ -0.86
RIPK3-201ENST00000216274 FAM19A4Q96LR4 140 aa9.68□□□□□ -0.86
RIPK3-201ENST00000216274 UQCR10Q9UDW1 63 aa9.68□□□□□ -0.86
RIPK3-201ENST00000216274 IGHV4-4A0A075B6R2 117 aa9.67□□□□□ -0.86
RIPK3-201ENST00000216274 IFI27P40305 119 aaPredicted RBP9.67□□□□□ -0.86
RIPK3-201ENST00000216274 KRTAP24-1Q3LI83 254 aa9.67□□□□□ -0.86
RIPK3-201ENST00000216274 C10orf99Q6UWK7 81 aa9.67□□□□□ -0.86
RIPK3-201ENST00000216274 APRG1Q8IVJ8 170 aa9.67□□□□□ -0.86
RIPK3-201ENST00000216274 RNF152Q8N8N0 203 aa9.67□□□□□ -0.86
RIPK3-201ENST00000216274 UBE2E2Q96LR5 201 aa9.67□□□□□ -0.86
RIPK3-201ENST00000216274 MAP1LC3AQ9H492 121 aa9.67□□□□□ -0.86
RIPK3-201ENST00000216274 MSRB1Q9NZV6 116 aa9.67□□□□□ -0.86
RIPK3-201ENST00000216274 IGKV3-7A0A075B6H7 116 aa9.66□□□□□ -0.86
RIPK3-201ENST00000216274 LOC389332A0A1B0GUA5 103 aa9.66□□□□□ -0.86
RIPK3-201ENST00000216274 LGALS9O00182 355 aa9.66□□□□□ -0.86
RIPK3-201ENST00000216274 MED14OSP0DP75 135 aa9.66□□□□□ -0.86
RIPK3-201ENST00000216274 PRR9Q5T870 116 aa9.66□□□□□ -0.86
RIPK3-201ENST00000216274 ESM1Q9NQ30 184 aa9.66□□□□□ -0.86
RIPK3-201ENST00000216274 NPYP01303 97 aa9.66□□□□□ -0.86
RIPK3-201ENST00000216274 SPANXN1Q5VSR9 72 aa9.66□□□□□ -0.86
RIPK3-201ENST00000216274 LINC00173Q6ZV60 143 aa9.66□□□□□ -0.86
RIPK3-201ENST00000216274 ATOH7Q8N100 152 aa9.66□□□□□ -0.86
RIPK3-201ENST00000216274 Q8N2B8 174 aa9.66□□□□□ -0.86
RIPK3-201ENST00000216274 DNAJC9-AS1A6NH13 148 aa9.65□□□□□ -0.86
RIPK3-201ENST00000216274 OR4C46A6NHA9 309 aa9.65□□□□□ -0.86
RIPK3-201ENST00000216274 SMKR1H3BMG3 65 aa9.65□□□□□ -0.86
RIPK3-201ENST00000216274 NCR2O95944 276 aa9.65□□□□□ -0.86
RIPK3-201ENST00000216274 RNASE1P07998 156 aaKnown RBP9.65□□□□□ -0.86
RIPK3-201ENST00000216274 IGLC3P0DOY3 106 aa9.65□□□□□ -0.86
RIPK3-201ENST00000216274 ASIPP42127 132 aa9.65□□□□□ -0.86
RIPK3-201ENST00000216274 MDFIQ99750 246 aa9.65□□□□□ -0.86
RIPK3-201ENST00000216274 SPATA12Q7Z6I5 190 aa9.64□□□□□ -0.87
RIPK3-201ENST00000216274 DCANP1Q8TF63 244 aa9.64□□□□□ -0.87
RIPK3-201ENST00000216274 ZNF747Q9BV97 191 aa9.64□□□□□ -0.87
RIPK3-201ENST00000216274 NXT2Q9NPJ8 142 aaKnown RBP9.64□□□□□ -0.87
RIPK3-201ENST00000216274 FBN1P35555 2871 aaKnown RBP9.64□□□□□ -0.87
RIPK3-201ENST00000216274 J3KRW8 73 aa9.64□□□□□ -0.87
RIPK3-201ENST00000216274 EREGO14944 169 aa9.64□□□□□ -0.87
RIPK3-201ENST00000216274 HBDP02042 147 aa9.64□□□□□ -0.87
RIPK3-201ENST00000216274 RNASE4P34096 147 aaKnown RBP9.64□□□□□ -0.87
RIPK3-201ENST00000216274 SPATA3Q8NHX4 192 aa9.64□□□□□ -0.87
RIPK3-201ENST00000216274 SNHG12Q9BXW3 62 aa9.64□□□□□ -0.87
RIPK3-201ENST00000216274 ZMAT5Q9UDW3 170 aaKnown RBP9.64□□□□□ -0.87
RIPK3-201ENST00000216274 TIMM8BQ9Y5J9 83 aaPredicted RBP9.64□□□□□ -0.87
RIPK3-201ENST00000216274 IGHV4OR15-8A0A075B7B6 117 aa9.63□□□□□ -0.87
RIPK3-201ENST00000216274 A0A087WW49 117 aa9.63□□□□□ -0.87
RIPK3-201ENST00000216274 LINC01546A6NGU7 62 aa9.63□□□□□ -0.87
RIPK3-201ENST00000216274 HSBP1L1C9JCN9 74 aa9.63□□□□□ -0.87
RIPK3-201ENST00000216274 F6UB75 175 aa9.63□□□□□ -0.87
RIPK3-201ENST00000216274 H3BVH4 76 aa9.63□□□□□ -0.87
RIPK3-201ENST00000216274 EDN2P20800 178 aa9.63□□□□□ -0.87
RIPK3-201ENST00000216274 S100A4P26447 101 aaKnown RBP9.63□□□□□ -0.87
RIPK3-201ENST00000216274 LEPP41159 167 aa9.63□□□□□ -0.87
RIPK3-201ENST00000216274 SNRPD3P62318 126 aaKnown RBP9.63□□□□□ -0.87
RIPK3-201ENST00000216274 WFDC3Q8IUB2 231 aa9.63□□□□□ -0.87
RIPK3-201ENST00000216274 ODF3Q96PU9 254 aa9.63□□□□□ -0.87
RIPK3-201ENST00000216274 MS4A6AQ9H2W1 248 aa9.63□□□□□ -0.87
RIPK3-201ENST00000216274 ST20Q9HBF5 79 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms