RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 IGLV5-52A0A0A0MRZ9 124 aa13.2□□□□□ -0.3
SYNGR1-201ENST00000216155 IGHV3-38A0A0C4DH36 116 aa13.2□□□□□ -0.3
SYNGR1-201ENST00000216155 A6NHS1 94 aa13.2□□□□□ -0.3
SYNGR1-201ENST00000216155 F6UZH7 168 aa13.2□□□□□ -0.3
SYNGR1-201ENST00000216155 GATA1P15976 413 aaPredicted RBP13.2□□□□□ -0.3
SYNGR1-201ENST00000216155 H2BFSP57053 126 aa13.2□□□□□ -0.3
SYNGR1-201ENST00000216155 TIRAPP58753 221 aa13.2□□□□□ -0.3
SYNGR1-201ENST00000216155 SH2D6Q7Z4S9 175 aa13.2□□□□□ -0.3
SYNGR1-201ENST00000216155 NHLRC2Q8NBF2 726 aa13.2□□□□□ -0.3
SYNGR1-201ENST00000216155 TVP23CQ96ET8 276 aa13.2□□□□□ -0.3
SYNGR1-201ENST00000216155 HSPB11Q9Y547 144 aa13.2□□□□□ -0.3
SYNGR1-201ENST00000216155 TRAV21A0A0B4J279 112 aa13.19□□□□□ -0.3
SYNGR1-201ENST00000216155 PPT1P50897 306 aa13.19□□□□□ -0.3
SYNGR1-201ENST00000216155 LINC01556Q5JQF7 62 aa13.19□□□□□ -0.3
SYNGR1-201ENST00000216155 GOLT1AQ6ZVE7 132 aa13.19□□□□□ -0.3
SYNGR1-201ENST00000216155 CMTM2Q8TAZ6 248 aa13.19□□□□□ -0.3
SYNGR1-201ENST00000216155 PPP1R1CQ8WVI7 109 aa13.19□□□□□ -0.3
SYNGR1-201ENST00000216155 SRRM2Q9UQ35 2752 aaKnown RBP13.19□□□□□ -0.3
SYNGR1-201ENST00000216155 TRAV8-1A0A0A6YYK1 113 aa13.18□□□□□ -0.3
SYNGR1-201ENST00000216155 PGPA6NDG6 321 aa13.18□□□□□ -0.3
SYNGR1-201ENST00000216155 PSCAO43653 123 aa13.18□□□□□ -0.3
SYNGR1-201ENST00000216155 CYCSP99999 105 aaKnown RBP13.18□□□□□ -0.3
SYNGR1-201ENST00000216155 NTN5Q8WTR8 489 aaPredicted RBP13.18□□□□□ -0.3
SYNGR1-201ENST00000216155 TMEM70Q9BUB7 260 aa13.18□□□□□ -0.3
SYNGR1-201ENST00000216155 SMIM3Q9BZL3 60 aa13.18□□□□□ -0.3
SYNGR1-201ENST00000216155 SDF2L1Q9HCN8 221 aa13.18□□□□□ -0.3
SYNGR1-201ENST00000216155 MBD2Q9UBB5 411 aa13.18□□□□□ -0.3
SYNGR1-201ENST00000216155 TREM1Q9NP99 234 aa13.17□□□□□ -0.3
SYNGR1-201ENST00000216155 IBA57-AS1B1ANH7 110 aa13.16□□□□□ -0.3
SYNGR1-201ENST00000216155 GNG5P63218 68 aa13.16□□□□□ -0.3
SYNGR1-201ENST00000216155 IFITM3Q01628 133 aa13.16□□□□□ -0.3
SYNGR1-201ENST00000216155 FAM74A1Q5RGS3 127 aa13.16□□□□□ -0.3
SYNGR1-201ENST00000216155 Q6ZSN1 163 aa13.16□□□□□ -0.3
SYNGR1-201ENST00000216155 Q8N814 137 aa13.16□□□□□ -0.3
SYNGR1-201ENST00000216155 SCGB1C1Q8TD33 95 aa13.16□□□□□ -0.3
SYNGR1-201ENST00000216155 FBLL1A6NHQ2 334 aaKnown RBP13.15□□□□□ -0.3
SYNGR1-201ENST00000216155 FAM229AH3BQW9 127 aa13.15□□□□□ -0.3
SYNGR1-201ENST00000216155 MPC2O95563 127 aa13.15□□□□□ -0.3
SYNGR1-201ENST00000216155 ARL6IP6Q8N6S5 226 aa13.15□□□□□ -0.3
SYNGR1-201ENST00000216155 SLC25A29Q8N8R3 303 aa13.15□□□□□ -0.3
SYNGR1-201ENST00000216155 ASB13Q8WXK3 278 aa13.15□□□□□ -0.3
SYNGR1-201ENST00000216155 Q9HAA7 133 aa13.15□□□□□ -0.3
SYNGR1-201ENST00000216155 PQLC2Q6ZP29 291 aa13.14□□□□□ -0.31
SYNGR1-201ENST00000216155 KCNS1Q96KK3 526 aa13.14□□□□□ -0.31
SYNGR1-201ENST00000216155 TRAV8-6A0A0B4J262 113 aa13.13□□□□□ -0.31
SYNGR1-201ENST00000216155 INMT-MINDY4F8WBC2 141 aa13.13□□□□□ -0.31
SYNGR1-201ENST00000216155 PFN1P07737 140 aaKnown RBP13.13□□□□□ -0.31
SYNGR1-201ENST00000216155 PET100P0DJ07 73 aa13.13□□□□□ -0.31
SYNGR1-201ENST00000216155 RPL12P30050 165 aaKnown RBP13.13□□□□□ -0.31
SYNGR1-201ENST00000216155 RHOHQ15669 191 aa13.13□□□□□ -0.31
SYNGR1-201ENST00000216155 OR10J3Q5JRS4 329 aa13.13□□□□□ -0.31
SYNGR1-201ENST00000216155 CFAP126Q5VTH2 177 aa13.13□□□□□ -0.31
SYNGR1-201ENST00000216155 DPPA3Q6W0C5 159 aa13.13□□□□□ -0.31
SYNGR1-201ENST00000216155 WFDC1Q9HC57 220 aa13.13□□□□□ -0.31
SYNGR1-201ENST00000216155 TRBV6-4A0A1B0GX49 114 aa13.12□□□□□ -0.31
SYNGR1-201ENST00000216155 HMGB3O15347 200 aaKnown RBP13.12□□□□□ -0.31
SYNGR1-201ENST00000216155 RS1O15537 224 aa13.12□□□□□ -0.31
SYNGR1-201ENST00000216155 IGHV3-30P01768 117 aa13.12□□□□□ -0.31
SYNGR1-201ENST00000216155 IGHV3-33P01772 117 aa13.12□□□□□ -0.31
SYNGR1-201ENST00000216155 IGHV3-30-3P0DP02 117 aa13.12□□□□□ -0.31
SYNGR1-201ENST00000216155 IGHV3-30-5P0DP03 117 aa13.12□□□□□ -0.31
SYNGR1-201ENST00000216155 RAB2AP61019 212 aa13.12□□□□□ -0.31
SYNGR1-201ENST00000216155 ACOT6Q3I5F7 207 aaPredicted RBP13.12□□□□□ -0.31
SYNGR1-201ENST00000216155 ZNF876PQ49A33 203 aa13.12□□□□□ -0.31
SYNGR1-201ENST00000216155 SGK494Q96LW2 274 aa13.12□□□□□ -0.31
SYNGR1-201ENST00000216155 PRADC1Q9BSG0 188 aa13.12□□□□□ -0.31
SYNGR1-201ENST00000216155 FAM30AQ9NZY2 134 aa13.12□□□□□ -0.31
SYNGR1-201ENST00000216155 C11orf21Q9P2W6 132 aa13.12□□□□□ -0.31
SYNGR1-201ENST00000216155 IGHV3-73A0A0B4J1V6 119 aa13.11□□□□□ -0.31
SYNGR1-201ENST00000216155 ZNF80P51504 273 aaPredicted RBP13.11□□□□□ -0.31
SYNGR1-201ENST00000216155 LELP1Q5T871 98 aa13.11□□□□□ -0.31
SYNGR1-201ENST00000216155 A0A1W2PPV4 95 aa13.1□□□□□ -0.31
SYNGR1-201ENST00000216155 C9orf85Q96MD7 179 aa13.1□□□□□ -0.31
SYNGR1-201ENST00000216155 NDFIP1Q9BT67 221 aa13.1□□□□□ -0.31
SYNGR1-201ENST00000216155 BOLA1Q9Y3E2 137 aa13.1□□□□□ -0.31
SYNGR1-201ENST00000216155 CIDEAO60543 219 aa13.09□□□□□ -0.31
SYNGR1-201ENST00000216155 ARL14EPLP0DKL9 152 aa13.09□□□□□ -0.31
SYNGR1-201ENST00000216155 WFDC2Q14508 124 aa13.09□□□□□ -0.31
SYNGR1-201ENST00000216155 LAGE3Q14657 143 aa13.09□□□□□ -0.31
SYNGR1-201ENST00000216155 TMEM75Q8N9X5 138 aa13.09□□□□□ -0.31
SYNGR1-201ENST00000216155 MARVELD1Q9BSK0 173 aa13.09□□□□□ -0.31
SYNGR1-201ENST00000216155 SERTM2A0A1B0GWG4 89 aa13.08□□□□□ -0.32
SYNGR1-201ENST00000216155 SSNA1O43805 119 aa13.08□□□□□ -0.32
SYNGR1-201ENST00000216155 DEFA1P59665 94 aa13.08□□□□□ -0.32
SYNGR1-201ENST00000216155 DEFA3P59666 94 aa13.08□□□□□ -0.32
SYNGR1-201ENST00000216155 Q8N3U1 123 aa13.08□□□□□ -0.32
SYNGR1-201ENST00000216155 GTSF1LQ9H1H1 148 aa13.08□□□□□ -0.32
SYNGR1-201ENST00000216155 PGPEP1LA6NFU8 196 aa13.07□□□□□ -0.32
SYNGR1-201ENST00000216155 GCGP01275 180 aa13.07□□□□□ -0.32
SYNGR1-201ENST00000216155 TCRAP04437 139 aa13.07□□□□□ -0.32
SYNGR1-201ENST00000216155 ZNF506Q5JVG8 444 aa13.07□□□□□ -0.32
SYNGR1-201ENST00000216155 C5orf17Q8NAS9 161 aa13.07□□□□□ -0.32
SYNGR1-201ENST00000216155 OR10G9Q8NGN4 311 aa13.07□□□□□ -0.32
SYNGR1-201ENST00000216155 OR10G7Q8NGN6 311 aa13.07□□□□□ -0.32
SYNGR1-201ENST00000216155 ATP6V0E2Q8NHE4 81 aa13.07□□□□□ -0.32
SYNGR1-201ENST00000216155 C1QBP02746 253 aa13.06□□□□□ -0.32
SYNGR1-201ENST00000216155 MGST1P10620 155 aaKnown RBP13.06□□□□□ -0.32
SYNGR1-201ENST00000216155 RNASE3P12724 160 aaKnown RBP13.06□□□□□ -0.32
SYNGR1-201ENST00000216155 CDC34P49427 236 aaPredicted RBP13.06□□□□□ -0.32
SYNGR1-201ENST00000216155 TAAR5O14804 337 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms