RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 C3orf36Q3SXR2 165 aa8.72□□□□□ -1.01
ACTN1-201ENST00000193403 ZNF562Q6V9R5 426 aa8.72□□□□□ -1.01
ACTN1-201ENST00000193403 IGHV3-64A0A075B6Q5 118 aa8.72□□□□□ -1.01
ACTN1-201ENST00000193403 G3V318 75 aa8.72□□□□□ -1.01
ACTN1-201ENST00000193403 LINC01549A6NIU2 74 aa8.71□□□□□ -1.01
ACTN1-201ENST00000193403 SIVA1O15304 175 aa8.71□□□□□ -1.01
ACTN1-201ENST00000193403 THBDP07204 575 aa8.71□□□□□ -1.01
ACTN1-201ENST00000193403 PDE6HQ13956 83 aa8.71□□□□□ -1.01
ACTN1-201ENST00000193403 MAPKAPK5-AS1Q8N8E1 139 aa8.71□□□□□ -1.01
ACTN1-201ENST00000193403 METTL26Q96S19 204 aa8.71□□□□□ -1.01
ACTN1-201ENST00000193403 RAB9AP51151 201 aa8.71□□□□□ -1.02
ACTN1-201ENST00000193403 DEFB1P60022 68 aa8.71□□□□□ -1.02
ACTN1-201ENST00000193403 SRSF1Q07955 248 aaKnown RBP eCLIP8.71□□□□□ -1.02
ACTN1-201ENST00000193403 TNFRSF14Q92956 283 aa8.71□□□□□ -1.02
ACTN1-201ENST00000193403 CCDC144NLQ6NUI1 221 aa8.71□□□□□ -1.02
ACTN1-201ENST00000193403 PIP4P2Q8N4L2 257 aa8.71□□□□□ -1.02
ACTN1-201ENST00000193403 SYT8Q8NBV8 401 aa8.71□□□□□ -1.02
ACTN1-201ENST00000193403 HIVEP2P31629 2446 aa8.71□□□□□ -1.02
ACTN1-201ENST00000193403 IGLV1-47P01700 117 aa8.7□□□□□ -1.02
ACTN1-201ENST00000193403 HLA-DRB4P13762 266 aa8.7□□□□□ -1.02
ACTN1-201ENST00000193403 INSL3P51460 131 aa8.7□□□□□ -1.02
ACTN1-201ENST00000193403 HLA-DRB4X5D2U9 266 aa8.7□□□□□ -1.02
ACTN1-201ENST00000193403 ZNF493Q6ZR52 646 aa8.7□□□□□ -1.02
ACTN1-201ENST00000193403 TMEM238LA0A1B0GVL6 79 aa8.7□□□□□ -1.02
ACTN1-201ENST00000193403 A6NJY4 79 aa8.7□□□□□ -1.02
ACTN1-201ENST00000193403 PTH2Q96A98 100 aa8.7□□□□□ -1.02
ACTN1-201ENST00000193403 MTORP42345 2549 aa8.7□□□□□ -1.02
ACTN1-201ENST00000193403 Q8N8P6 123 aa8.69□□□□□ -1.02
ACTN1-201ENST00000193403 SLC25A16P16260 332 aa8.69□□□□□ -1.02
ACTN1-201ENST00000193403 Q6ZQT7 251 aa8.69□□□□□ -1.02
ACTN1-201ENST00000193403 SPAG8Q99932 426 aaPredicted RBP8.69□□□□□ -1.02
ACTN1-201ENST00000193403 C20orf78Q9BR46 151 aa8.69□□□□□ -1.02
ACTN1-201ENST00000193403 FN1P02751 2386 aaKnown RBP8.69□□□□□ -1.02
ACTN1-201ENST00000193403 PRB1P04280 392 aa8.69□□□□□ -1.02
ACTN1-201ENST00000193403 RNASE4P34096 147 aaKnown RBP8.69□□□□□ -1.02
ACTN1-201ENST00000193403 MRGPRG-AS1Q2M3A8 158 aa8.69□□□□□ -1.02
ACTN1-201ENST00000193403 FOXI2Q6ZQN5 318 aa8.69□□□□□ -1.02
ACTN1-201ENST00000193403 DPF1Q92782 380 aa8.69□□□□□ -1.02
ACTN1-201ENST00000193403 ZNF256Q9Y2P7 627 aaPredicted RBP8.69□□□□□ -1.02
ACTN1-201ENST00000193403 PRSS2P07478 247 aa8.68□□□□□ -1.02
ACTN1-201ENST00000193403 SPINK8P0C7L1 97 aa8.68□□□□□ -1.02
ACTN1-201ENST00000193403 KLHL30-AS1Q8NEE0 82 aa8.68□□□□□ -1.02
ACTN1-201ENST00000193403 ATP6V0BQ99437 205 aa8.68□□□□□ -1.02
ACTN1-201ENST00000193403 SRSF8Q9BRL6 282 aaKnown RBP8.68□□□□□ -1.02
ACTN1-201ENST00000193403 AGPAT4-IT1Q9H0P7 198 aa8.68□□□□□ -1.02
ACTN1-201ENST00000193403 SMPXQ9UHP9 88 aa8.68□□□□□ -1.02
ACTN1-201ENST00000193403 IGHV3OR16-12A0A075B7B8 117 aa8.68□□□□□ -1.02
ACTN1-201ENST00000193403 HERVK_113P61574 105 aa8.68□□□□□ -1.02
ACTN1-201ENST00000193403 PRADC1Q9BSG0 188 aa8.68□□□□□ -1.02
ACTN1-201ENST00000193403 H7C1H1 209 aa8.68□□□□□ -1.02
ACTN1-201ENST00000193403 PRTN3P24158 256 aa8.68□□□□□ -1.02
ACTN1-201ENST00000193403 IGFL2Q6UWQ7 119 aa8.68□□□□□ -1.02
ACTN1-201ENST00000193403 VMO1Q7Z5L0 202 aa8.68□□□□□ -1.02
ACTN1-201ENST00000193403 FANCD2OSQ96PS1 177 aa8.68□□□□□ -1.02
ACTN1-201ENST00000193403 F8W1H4 67 aa8.67□□□□□ -1.02
ACTN1-201ENST00000193403 CEACAM4O75871 244 aa8.67□□□□□ -1.02
ACTN1-201ENST00000193403 RPL39LQ96EH5 51 aaKnown RBP8.67□□□□□ -1.02
ACTN1-201ENST00000193403 DUX5Q96PT3 197 aa8.67□□□□□ -1.02
ACTN1-201ENST00000193403 WI2-2373I1.2A0A1W2PRP0 233 aa8.67□□□□□ -1.02
ACTN1-201ENST00000193403 OR10J6PQ8NGY7 276 aa8.67□□□□□ -1.02
ACTN1-201ENST00000193403 RAX2Q96IS3 184 aa8.67□□□□□ -1.02
ACTN1-201ENST00000193403 PLNP26678 52 aa8.67□□□□□ -1.02
ACTN1-201ENST00000193403 RRN3P1Q2M238 152 aa8.67□□□□□ -1.02
ACTN1-201ENST00000193403 RNF185Q96GF1 192 aa8.67□□□□□ -1.02
ACTN1-201ENST00000193403 CLUHP3Q96NS8 147 aa8.67□□□□□ -1.02
ACTN1-201ENST00000193403 MSRB2Q9Y3D2 182 aa8.67□□□□□ -1.02
ACTN1-201ENST00000193403 CRYGBP07316 175 aa8.66□□□□□ -1.02
ACTN1-201ENST00000193403 CTSGP08311 255 aa8.66□□□□□ -1.02
ACTN1-201ENST00000193403 MYMXA0A1B0GTQ4 84 aa8.66□□□□□ -1.02
ACTN1-201ENST00000193403 SHISA9B4DS77 424 aa8.66□□□□□ -1.02
ACTN1-201ENST00000193403 C2orf66Q6UXQ4 117 aa8.66□□□□□ -1.02
ACTN1-201ENST00000193403 C1orf122Q6ZSJ8 110 aa8.66□□□□□ -1.02
ACTN1-201ENST00000193403 DLX4Q92988 240 aaPredicted RBP8.66□□□□□ -1.02
ACTN1-201ENST00000193403 GEMIN7Q9H840 131 aaKnown RBP8.66□□□□□ -1.02
ACTN1-201ENST00000193403 KAAG1Q9UBP8 84 aa8.66□□□□□ -1.02
ACTN1-201ENST00000193403 F8VRH5 84 aa8.66□□□□□ -1.02
ACTN1-201ENST00000193403 ASIPP42127 132 aa8.66□□□□□ -1.02
ACTN1-201ENST00000193403 A0A087WX48 190 aa8.65□□□□□ -1.02
ACTN1-201ENST00000193403 LINC00477Q96M19 166 aa8.65□□□□□ -1.02
ACTN1-201ENST00000193403 SPANXB1Q9NS25 103 aaPredicted RBP8.65□□□□□ -1.02
ACTN1-201ENST00000193403 IGLV11-55A0A075B6I3 123 aa8.65□□□□□ -1.02
ACTN1-201ENST00000193403 A0A087WWL8 130 aa8.65□□□□□ -1.02
ACTN1-201ENST00000193403 IGKV3D-20A0A0C4DH25 116 aa8.65□□□□□ -1.02
ACTN1-201ENST00000193403 ATP6V0E1O15342 81 aa8.65□□□□□ -1.02
ACTN1-201ENST00000193403 ANXA2RQ3ZCQ2 193 aa8.65□□□□□ -1.02
ACTN1-201ENST00000193403 LYRM7Q5U5X0 104 aa8.65□□□□□ -1.02
ACTN1-201ENST00000193403 C8orf31Q8N9H6 132 aa8.65□□□□□ -1.02
ACTN1-201ENST00000193403 JMJD1CQ15652 2540 aa8.65□□□□□ -1.02
ACTN1-201ENST00000193403 LRBAP50851 2863 aa8.65□□□□□ -1.03
ACTN1-201ENST00000193403 F6UB75 175 aa8.65□□□□□ -1.03
ACTN1-201ENST00000193403 IGLC6P0CF74 106 aa8.65□□□□□ -1.03
ACTN1-201ENST00000193403 MAPK1IP1LQ8NDC0 245 aa8.65□□□□□ -1.03
ACTN1-201ENST00000193403 SLC50A1Q9BRV3 221 aa8.65□□□□□ -1.03
ACTN1-201ENST00000193403 SMIM2Q9BVW6 85 aa8.65□□□□□ -1.03
ACTN1-201ENST00000193403 HHLA3Q9XRX5 114 aa8.65□□□□□ -1.03
ACTN1-201ENST00000193403 TRAV8-2A0A0B4J237 113 aa8.64□□□□□ -1.03
ACTN1-201ENST00000193403 LGALS3P17931 250 aaKnown RBP8.64□□□□□ -1.03
ACTN1-201ENST00000193403 SUMO2P61956 95 aaKnown RBP8.64□□□□□ -1.03
ACTN1-201ENST00000193403 TRAV26-1A0A087WT03 109 aa8.64□□□□□ -1.03
ACTN1-201ENST00000193403 TRAV2A0A0B4J234 112 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms