RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 LINC01548A6NM66 108 aa7.81□□□□□ -1.16
CLDN18-201ENST00000183605 LOXP28300 417 aaPredicted RBP7.81□□□□□ -1.16
CLDN18-201ENST00000183605 TRPT1Q86TN4 253 aaKnown RBP7.81□□□□□ -1.16
CLDN18-201ENST00000183605 WDFY3Q8IZQ1 3526 aa7.81□□□□□ -1.16
CLDN18-201ENST00000183605 TRAV4A0A0B4J268 109 aa7.81□□□□□ -1.16
CLDN18-201ENST00000183605 NBR2O15453 112 aa7.81□□□□□ -1.16
CLDN18-201ENST00000183605 ECSCRQ19T08 205 aa7.81□□□□□ -1.16
CLDN18-201ENST00000183605 NDUFA11Q86Y39 141 aa7.81□□□□□ -1.16
CLDN18-201ENST00000183605 CREBBPQ92793 2442 aa7.81□□□□□ -1.16
CLDN18-201ENST00000183605 PRAC2D3DTV9 90 aa7.81□□□□□ -1.16
CLDN18-201ENST00000183605 BUB1B-PAK6H3BSN5 160 aa7.81□□□□□ -1.16
CLDN18-201ENST00000183605 IGHG3P01860 377 aa7.81□□□□□ -1.16
CLDN18-201ENST00000183605 RPL32P62910 135 aaKnown RBP7.81□□□□□ -1.16
CLDN18-201ENST00000183605 PAX8Q06710 450 aa7.81□□□□□ -1.16
CLDN18-201ENST00000183605 TCF15Q12870 199 aa7.81□□□□□ -1.16
CLDN18-201ENST00000183605 C10orf126Q8N4M7 172 aa7.81□□□□□ -1.16
CLDN18-201ENST00000183605 C16orf92Q96LL3 132 aa7.81□□□□□ -1.16
CLDN18-201ENST00000183605 COL6A3P12111 3177 aa7.8□□□□□ -1.16
CLDN18-201ENST00000183605 LYNX1G3V0Z9 82 aa7.8□□□□□ -1.16
CLDN18-201ENST00000183605 LYNX1P0DP58 116 aa7.8□□□□□ -1.16
CLDN18-201ENST00000183605 ZNF56Q15929 161 aa7.8□□□□□ -1.16
CLDN18-201ENST00000183605 PRSS33Q8NF86 280 aa7.8□□□□□ -1.16
CLDN18-201ENST00000183605 FHL3Q13643 280 aa7.8□□□□□ -1.16
CLDN18-201ENST00000183605 ZNF256Q9Y2P7 627 aaPredicted RBP7.8□□□□□ -1.16
CLDN18-201ENST00000183605 COX6CP09669 75 aa7.79□□□□□ -1.16
CLDN18-201ENST00000183605 ASIPP42127 132 aa7.79□□□□□ -1.16
CLDN18-201ENST00000183605 C2orf82Q6UX34 121 aa7.79□□□□□ -1.16
CLDN18-201ENST00000183605 C1orf210Q8IVY1 113 aa7.79□□□□□ -1.16
CLDN18-201ENST00000183605 ACACAQ13085 2346 aa7.79□□□□□ -1.16
CLDN18-201ENST00000183605 WT1P19544 449 aaPredicted RBP7.79□□□□□ -1.16
CLDN18-201ENST00000183605 PAPPA-AS1Q5QFB9 102 aa7.79□□□□□ -1.16
CLDN18-201ENST00000183605 RPL39LQ96EH5 51 aaKnown RBP7.79□□□□□ -1.16
CLDN18-201ENST00000183605 SLC50A1Q9BRV3 221 aa7.79□□□□□ -1.16
CLDN18-201ENST00000183605 CTSZQ9UBR2 303 aa7.79□□□□□ -1.16
CLDN18-201ENST00000183605 FCN3O75636 299 aa7.79□□□□□ -1.16
CLDN18-201ENST00000183605 TRAV12-1A0A0B4J245 112 aa7.78□□□□□ -1.16
CLDN18-201ENST00000183605 ATXN8Q156A1 80 aa7.78□□□□□ -1.16
CLDN18-201ENST00000183605 OVOL3O00110 214 aa7.78□□□□□ -1.16
CLDN18-201ENST00000183605 BSPH1Q075Z2 132 aa7.78□□□□□ -1.16
CLDN18-201ENST00000183605 Q6ZS92 163 aa7.78□□□□□ -1.16
CLDN18-201ENST00000183605 BAALCQ8WXS3 180 aa7.78□□□□□ -1.16
CLDN18-201ENST00000183605 AGPAT4-IT1Q9H0P7 198 aa7.78□□□□□ -1.16
CLDN18-201ENST00000183605 A4D1N5 150 aa7.78□□□□□ -1.16
CLDN18-201ENST00000183605 ADIPOQQ15848 244 aa7.78□□□□□ -1.16
CLDN18-201ENST00000183605 IGKV3D-20A0A0C4DH25 116 aa7.77□□□□□ -1.17
CLDN18-201ENST00000183605 H3BMM0 161 aa7.77□□□□□ -1.17
CLDN18-201ENST00000183605 RHODO00212 210 aa7.77□□□□□ -1.17
CLDN18-201ENST00000183605 FAM74A4Q5TZK3 123 aa7.77□□□□□ -1.17
CLDN18-201ENST00000183605 OR10J6PQ8NGY7 276 aa7.77□□□□□ -1.17
CLDN18-201ENST00000183605 UBE2WQ96B02 151 aa7.77□□□□□ -1.17
CLDN18-201ENST00000183605 DPM3Q9P2X0 92 aa7.77□□□□□ -1.17
CLDN18-201ENST00000183605 TP53TG1Q9Y2A0 90 aa7.77□□□□□ -1.17
CLDN18-201ENST00000183605 CFC1BP0CG36 223 aa7.77□□□□□ -1.17
CLDN18-201ENST00000183605 CFC1P0CG37 223 aa7.77□□□□□ -1.17
CLDN18-201ENST00000183605 Q8N1Y9 231 aa7.77□□□□□ -1.17
CLDN18-201ENST00000183605 CITED1Q99966 193 aa7.77□□□□□ -1.17
CLDN18-201ENST00000183605 DPH3P1Q9H4G8 78 aa7.77□□□□□ -1.17
CLDN18-201ENST00000183605 DKK4Q9UBT3 224 aa7.77□□□□□ -1.17
CLDN18-201ENST00000183605 ARHGAP32A7KAX9 2087 aa7.77□□□□□ -1.17
CLDN18-201ENST00000183605 C11orf86A6NJI1 115 aa7.77□□□□□ -1.17
CLDN18-201ENST00000183605 DUSP14O95147 198 aaKnown RBP7.77□□□□□ -1.17
CLDN18-201ENST00000183605 METTL26Q96S19 204 aa7.76□□□□□ -1.17
CLDN18-201ENST00000183605 TEX49A0A1B0GTD5 131 aa7.76□□□□□ -1.17
CLDN18-201ENST00000183605 UBE2D1P51668 147 aa7.76□□□□□ -1.17
CLDN18-201ENST00000183605 NPC2P61916 151 aa7.76□□□□□ -1.17
CLDN18-201ENST00000183605 CLEC19AQ6UXS0 136 aa7.76□□□□□ -1.17
CLDN18-201ENST00000183605 NRACQ8N912 160 aa7.76□□□□□ -1.17
CLDN18-201ENST00000183605 A0A1W2PNU3 283 aaPredicted RBP7.75□□□□□ -1.17
CLDN18-201ENST00000183605 J3QQQ9 107 aa7.75□□□□□ -1.17
CLDN18-201ENST00000183605 CRLF1O75462 422 aa7.75□□□□□ -1.17
CLDN18-201ENST00000183605 UBE2D3P61077 147 aa7.75□□□□□ -1.17
CLDN18-201ENST00000183605 UBE2D2P62837 147 aa7.75□□□□□ -1.17
CLDN18-201ENST00000183605 FOXC1Q12948 553 aa7.75□□□□□ -1.17
CLDN18-201ENST00000183605 NEXN-AS1Q8NBZ9 246 aa7.75□□□□□ -1.17
CLDN18-201ENST00000183605 AJUBAQ96IF1 538 aa7.75□□□□□ -1.17
CLDN18-201ENST00000183605 SPTAN1Q13813 2472 aaKnown RBP7.75□□□□□ -1.17
CLDN18-201ENST00000183605 TMEM95Q3KNT9 176 aa7.75□□□□□ -1.17
CLDN18-201ENST00000183605 Q6ZQT7 251 aa7.75□□□□□ -1.17
CLDN18-201ENST00000183605 C8orf31Q8N9H6 132 aa7.75□□□□□ -1.17
CLDN18-201ENST00000183605 FAM57AQ8TBR7 257 aa7.75□□□□□ -1.17
CLDN18-201ENST00000183605 TOMM6Q96B49 74 aa7.75□□□□□ -1.17
CLDN18-201ENST00000183605 A0A0J9YY99 117 aa7.75□□□□□ -1.17
CLDN18-201ENST00000183605 MRPS12O15235 138 aaKnown RBP7.75□□□□□ -1.17
CLDN18-201ENST00000183605 CRIP2P52943 208 aaPredicted RBP7.75□□□□□ -1.17
CLDN18-201ENST00000183605 PMVKQ15126 192 aa7.75□□□□□ -1.17
CLDN18-201ENST00000183605 MRGPRG-AS1Q2M3A8 158 aa7.75□□□□□ -1.17
CLDN18-201ENST00000183605 LINC01620Q4KN68 170 aa7.75□□□□□ -1.17
CLDN18-201ENST00000183605 RASL10AQ92737 203 aa7.75□□□□□ -1.17
CLDN18-201ENST00000183605 RNASE6Q93091 150 aaKnown RBP7.75□□□□□ -1.17
CLDN18-201ENST00000183605 SPRY4Q9C004 299 aa7.75□□□□□ -1.17
CLDN18-201ENST00000183605 PPP1R17O96001 155 aa7.74□□□□□ -1.17
CLDN18-201ENST00000183605 THBDP07204 575 aa7.74□□□□□ -1.17
CLDN18-201ENST00000183605 RNASE4P34096 147 aaKnown RBP7.74□□□□□ -1.17
CLDN18-201ENST00000183605 NDPQ00604 133 aa7.74□□□□□ -1.17
CLDN18-201ENST00000183605 DOPEY2Q9Y3R5 2298 aa7.74□□□□□ -1.17
CLDN18-201ENST00000183605 IGLV2-18A0A075B6J9 118 aa7.74□□□□□ -1.17
CLDN18-201ENST00000183605 MBD3L4A6NDZ8 208 aaPredicted RBP7.74□□□□□ -1.17
CLDN18-201ENST00000183605 MBD3L3A6NE82 208 aaPredicted RBP7.74□□□□□ -1.17
CLDN18-201ENST00000183605 MBD3L5A6NJ08 208 aaPredicted RBP7.74□□□□□ -1.17
CLDN18-201ENST00000183605 LINC01619G3V211 115 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms