RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 FAM19A2Q8N3H0 131 aa14.78□□□□□ -0.04
TNFRSF1A-201ENST00000162749 PPP1R14DQ9NXH3 145 aa14.78□□□□□ -0.04
TNFRSF1A-201ENST00000162749 OVOL1O14753 267 aa14.77□□□□□ -0.04
TNFRSF1A-201ENST00000162749 FOXA3P55318 350 aaPredicted RBP14.77□□□□□ -0.04
TNFRSF1A-201ENST00000162749 NIT1Q86X76 327 aa14.77□□□□□ -0.04
TNFRSF1A-201ENST00000162749 Q8N976 141 aa14.77□□□□□ -0.04
TNFRSF1A-201ENST00000162749 KIR2DL5BA0A0G2JN68 375 aa14.77□□□□□ -0.05
TNFRSF1A-201ENST00000162749 KIR2DL5BA0A0G2JPC4 375 aa14.77□□□□□ -0.05
TNFRSF1A-201ENST00000162749 F6UB75 175 aa14.77□□□□□ -0.05
TNFRSF1A-201ENST00000162749 K7EQG2 157 aa14.77□□□□□ -0.05
TNFRSF1A-201ENST00000162749 SH2D1AO60880 128 aa14.77□□□□□ -0.05
TNFRSF1A-201ENST00000162749 CSN3P07498 182 aa14.77□□□□□ -0.05
TNFRSF1A-201ENST00000162749 TEX43Q6ZNM6 134 aa14.77□□□□□ -0.05
TNFRSF1A-201ENST00000162749 KIR2DL5AQ8N109 375 aa14.77□□□□□ -0.05
TNFRSF1A-201ENST00000162749 VWFP04275 2813 aa14.76□□□□□ -0.05
TNFRSF1A-201ENST00000162749 OR10J6PQ8NGY7 276 aa14.76□□□□□ -0.05
TNFRSF1A-201ENST00000162749 ADARB2-AS1A8MUL3 147 aa14.76□□□□□ -0.05
TNFRSF1A-201ENST00000162749 OR8A1Q8NGG7 326 aa14.76□□□□□ -0.05
TNFRSF1A-201ENST00000162749 ZNF688P0C7X2 276 aa14.75□□□□□ -0.05
TNFRSF1A-201ENST00000162749 KRTDAPP60985 99 aa14.74□□□□□ -0.05
TNFRSF1A-201ENST00000162749 LINC00477Q96M19 166 aa14.74□□□□□ -0.05
TNFRSF1A-201ENST00000162749 KRTAP10-3P60369 221 aa14.74□□□□□ -0.05
TNFRSF1A-201ENST00000162749 HIST1H1AQ02539 215 aaPredicted RBP14.74□□□□□ -0.05
TNFRSF1A-201ENST00000162749 URB1-AS1Q96HZ7 61 aa14.74□□□□□ -0.05
TNFRSF1A-201ENST00000162749 LENEPQ9Y5L5 61 aa14.74□□□□□ -0.05
TNFRSF1A-201ENST00000162749 MAST4O15021 2626 aa14.73□□□□□ -0.05
TNFRSF1A-201ENST00000162749 SNRPD3P62318 126 aaKnown RBP14.73□□□□□ -0.05
TNFRSF1A-201ENST00000162749 PSMG4Q5JS54 123 aa14.73□□□□□ -0.05
TNFRSF1A-201ENST00000162749 NTF3P20783 257 aa14.73□□□□□ -0.05
TNFRSF1A-201ENST00000162749 TMEM61Q8N0U2 210 aa14.73□□□□□ -0.05
TNFRSF1A-201ENST00000162749 CYSRT1A8MQ03 144 aa14.72□□□□□ -0.05
TNFRSF1A-201ENST00000162749 FABP5P3A8MUU1 101 aa14.72□□□□□ -0.05
TNFRSF1A-201ENST00000162749 G0S2P27469 103 aa14.72□□□□□ -0.05
TNFRSF1A-201ENST00000162749 DYNLRB2Q8TF09 96 aa14.72□□□□□ -0.05
TNFRSF1A-201ENST00000162749 ARMS2P0C7Q2 107 aa14.71□□□□□ -0.05
TNFRSF1A-201ENST00000162749 C3orf79P0CE67 100 aa14.71□□□□□ -0.05
TNFRSF1A-201ENST00000162749 DEFB114Q30KQ6 69 aa14.71□□□□□ -0.05
TNFRSF1A-201ENST00000162749 NSUN5P1Q3KNT7 163 aa14.71□□□□□ -0.05
TNFRSF1A-201ENST00000162749 SNHG12Q9BXW3 62 aa14.71□□□□□ -0.05
TNFRSF1A-201ENST00000162749 TMEM189A5PLL7 270 aa14.7□□□□□ -0.06
TNFRSF1A-201ENST00000162749 PRR9Q5T870 116 aa14.7□□□□□ -0.06
TNFRSF1A-201ENST00000162749 FAM19A4Q96LR4 140 aa14.7□□□□□ -0.06
TNFRSF1A-201ENST00000162749 TMSB15BA0A087X1C1 80 aa14.7□□□□□ -0.06
TNFRSF1A-201ENST00000162749 LOC102724200A0A096LPH7 203 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF1A-201ENST00000162749 A0A1B0GUT8 65 aa14.7□□□□□ -0.06
TNFRSF1A-201ENST00000162749 HSBP1O75506 76 aa14.7□□□□□ -0.06
TNFRSF1A-201ENST00000162749 RNASEKQ6P5S7 137 aaKnown RBP14.7□□□□□ -0.06
TNFRSF1A-201ENST00000162749 ZNF575Q86XF7 245 aa14.7□□□□□ -0.06
TNFRSF1A-201ENST00000162749 ZFAND2AQ8N6M9 145 aa14.7□□□□□ -0.06
TNFRSF1A-201ENST00000162749 CD300EQ496F6 205 aaPredicted RBP14.69□□□□□ -0.06
TNFRSF1A-201ENST00000162749 C20orf144Q9BQM9 153 aa14.69□□□□□ -0.06
TNFRSF1A-201ENST00000162749 PAM16Q9Y3D7 125 aa14.69□□□□□ -0.06
TNFRSF1A-201ENST00000162749 NOTCH3Q9UM47 2321 aa14.68□□□□□ -0.06
TNFRSF1A-201ENST00000162749 ORM1P02763 201 aa14.68□□□□□ -0.06
TNFRSF1A-201ENST00000162749 RAB4AP20338 218 aa14.68□□□□□ -0.06
TNFRSF1A-201ENST00000162749 Q6ZQT7 251 aa14.68□□□□□ -0.06
TNFRSF1A-201ENST00000162749 M0R143 59 aa14.68□□□□□ -0.06
TNFRSF1A-201ENST00000162749 LINC01559Q495D7 138 aa14.68□□□□□ -0.06
TNFRSF1A-201ENST00000162749 NDUFA11Q86Y39 141 aa14.68□□□□□ -0.06
TNFRSF1A-201ENST00000162749 GATD1Q8NB37 220 aa14.68□□□□□ -0.06
TNFRSF1A-201ENST00000162749 VAMP8Q9BV40 100 aa14.68□□□□□ -0.06
TNFRSF1A-201ENST00000162749 SIGLEC8Q9NYZ4 499 aa14.68□□□□□ -0.06
TNFRSF1A-201ENST00000162749 C11orf21Q9P2W6 132 aa14.68□□□□□ -0.06
TNFRSF1A-201ENST00000162749 TRAV2A0A0B4J234 112 aa14.67□□□□□ -0.06
TNFRSF1A-201ENST00000162749 TRBV7-9A0A0J9YWB2 115 aa14.67□□□□□ -0.06
TNFRSF1A-201ENST00000162749 A0A0J9YX75 114 aa14.67□□□□□ -0.06
TNFRSF1A-201ENST00000162749 J3KRW8 73 aa14.67□□□□□ -0.06
TNFRSF1A-201ENST00000162749 M0R2Z0 102 aa14.66□□□□□ -0.06
TNFRSF1A-201ENST00000162749 RIGQ13278 110 aa14.66□□□□□ -0.06
TNFRSF1A-201ENST00000162749 EBLN2Q6P2I7 272 aa14.66□□□□□ -0.06
TNFRSF1A-201ENST00000162749 BORCS7Q96B45 105 aa14.66□□□□□ -0.06
TNFRSF1A-201ENST00000162749 IGKV3D-20A0A0C4DH25 116 aa14.66□□□□□ -0.06
TNFRSF1A-201ENST00000162749 Q6AWC8 147 aa14.66□□□□□ -0.06
TNFRSF1A-201ENST00000162749 APRG1Q8IVJ8 170 aa14.66□□□□□ -0.06
TNFRSF1A-201ENST00000162749 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.66□□□□□ -0.06
TNFRSF1A-201ENST00000162749 ZNF25P17030 456 aaPredicted RBP14.65□□□□□ -0.06
TNFRSF1A-201ENST00000162749 KIR3DS1Q14943 382 aa14.65□□□□□ -0.06
TNFRSF1A-201ENST00000162749 TPPP3Q9BW30 176 aa14.65□□□□□ -0.06
TNFRSF1A-201ENST00000162749 RPS20P60866 119 aaKnown RBP14.65□□□□□ -0.06
TNFRSF1A-201ENST00000162749 PMCHL1Q16048 86 aa14.64□□□□□ -0.07
TNFRSF1A-201ENST00000162749 CTRLP40313 264 aa14.64□□□□□ -0.07
TNFRSF1A-201ENST00000162749 LYZL1Q6UWQ5 148 aa14.64□□□□□ -0.07
TNFRSF1A-201ENST00000162749 FOXI2Q6ZQN5 318 aa14.64□□□□□ -0.07
TNFRSF1A-201ENST00000162749 SPAG8Q99932 426 aaPredicted RBP14.64□□□□□ -0.07
TNFRSF1A-201ENST00000162749 ZNF256Q9Y2P7 627 aaPredicted RBP14.64□□□□□ -0.07
TNFRSF1A-201ENST00000162749 TRRAPQ9Y4A5 3859 aa14.64□□□□□ -0.07
TNFRSF1A-201ENST00000162749 KLLNB2CW77 178 aa14.63□□□□□ -0.07
TNFRSF1A-201ENST00000162749 IGLC6P0CF74 106 aa14.63□□□□□ -0.07
TNFRSF1A-201ENST00000162749 DEFB131AP59861 70 aa14.63□□□□□ -0.07
TNFRSF1A-201ENST00000162749 CHCHD1Q96BP2 118 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1A-201ENST00000162749 TRAV25A0A0B4J276 109 aa14.62□□□□□ -0.07
TNFRSF1A-201ENST00000162749 A0A1B0GW15 77 aa14.62□□□□□ -0.07
TNFRSF1A-201ENST00000162749 MIEN1Q9BRT3 115 aa14.62□□□□□ -0.07
TNFRSF1A-201ENST00000162749 LINC00614P0C842 121 aa14.62□□□□□ -0.07
TNFRSF1A-201ENST00000162749 ODF3Q96PU9 254 aa14.62□□□□□ -0.07
TNFRSF1A-201ENST00000162749 TRAV21A0A0B4J279 112 aa14.61□□□□□ -0.07
TNFRSF1A-201ENST00000162749 IGHV1-24A0A0C4DH33 117 aa14.61□□□□□ -0.07
TNFRSF1A-201ENST00000162749 OR4C46A6NHA9 309 aa14.61□□□□□ -0.07
TNFRSF1A-201ENST00000162749 IGKV3-20P01619 116 aa14.61□□□□□ -0.07
TNFRSF1A-201ENST00000162749 RNASE4P34096 147 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms