RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 MRPL35Q9NZE8 188 aaKnown RBP14.8□□□□□ -0.04
MBD3-201ENST00000156825 ELANEP08246 267 aa14.8□□□□□ -0.04
MBD3-201ENST00000156825 HLA-DRB4P13762 266 aa14.8□□□□□ -0.04
MBD3-201ENST00000156825 VPREB3Q9UKI3 123 aa14.8□□□□□ -0.04
MBD3-201ENST00000156825 HLA-DRB4X5D2U9 266 aa14.8□□□□□ -0.04
MBD3-201ENST00000156825 APRG1Q8IVJ8 170 aa14.79□□□□□ -0.04
MBD3-201ENST00000156825 IGHV7-81A0A0B4J1V7 117 aa14.79□□□□□ -0.04
MBD3-201ENST00000156825 HIST1H4AP62805 103 aaKnown RBP14.79□□□□□ -0.04
MBD3-201ENST00000156825 MRAPQ8TCY5 172 aa14.79□□□□□ -0.04
MBD3-201ENST00000156825 PCDH15Q96QU1 1955 aa14.79□□□□□ -0.04
MBD3-201ENST00000156825 EGR2P11161 476 aaPredicted RBP14.79□□□□□ -0.04
MBD3-201ENST00000156825 MSMPQ1L6U9 139 aa14.79□□□□□ -0.04
MBD3-201ENST00000156825 C9JAW5 83 aa14.79□□□□□ -0.04
MBD3-201ENST00000156825 CENPFP49454 3210 aa14.78□□□□□ -0.04
MBD3-201ENST00000156825 PMVKQ15126 192 aa14.78□□□□□ -0.04
MBD3-201ENST00000156825 DLX4Q92988 240 aaPredicted RBP14.78□□□□□ -0.04
MBD3-201ENST00000156825 NUP210Q8TEM1 1887 aaPredicted RBP14.78□□□□□ -0.04
MBD3-201ENST00000156825 ADAMTS9Q9P2N4 1935 aa14.78□□□□□ -0.04
MBD3-201ENST00000156825 SLURP1P55000 103 aa14.78□□□□□ -0.04
MBD3-201ENST00000156825 SIGMAR1Q99720 223 aa14.78□□□□□ -0.04
MBD3-201ENST00000156825 C11orf52Q96A22 123 aa14.78□□□□□ -0.04
MBD3-201ENST00000156825 IGF2BP2-AS1Q96M15 143 aa14.78□□□□□ -0.04
MBD3-201ENST00000156825 GATA1P15976 413 aaPredicted RBP14.78□□□□□ -0.04
MBD3-201ENST00000156825 TLN1Q9Y490 2541 aaKnown RBP14.77□□□□□ -0.05
MBD3-201ENST00000156825 A0A0J9YY99 117 aa14.77□□□□□ -0.05
MBD3-201ENST00000156825 IGLV2-23P01705 113 aa14.77□□□□□ -0.05
MBD3-201ENST00000156825 OR11H6Q8NGC7 330 aa14.77□□□□□ -0.05
MBD3-201ENST00000156825 CFHR4Q92496 578 aa14.77□□□□□ -0.05
MBD3-201ENST00000156825 IGLL1P15814 213 aa14.77□□□□□ -0.05
MBD3-201ENST00000156825 SMIM2Q9BVW6 85 aa14.76□□□□□ -0.05
MBD3-201ENST00000156825 ZNF561-AS1K7EIQ3 104 aa14.76□□□□□ -0.05
MBD3-201ENST00000156825 IGKV1-17P01599 117 aa14.76□□□□□ -0.05
MBD3-201ENST00000156825 SPRY4Q9C004 299 aa14.76□□□□□ -0.05
MBD3-201ENST00000156825 NOP10Q9NPE3 64 aaKnown RBP14.76□□□□□ -0.05
MBD3-201ENST00000156825 TMEM243Q9BU79 118 aa14.76□□□□□ -0.05
MBD3-201ENST00000156825 K7EIM0 57 aa14.75□□□□□ -0.05
MBD3-201ENST00000156825 PLXNB1O43157 2135 aa14.75□□□□□ -0.05
MBD3-201ENST00000156825 ZNF124Q15973 351 aa14.75□□□□□ -0.05
MBD3-201ENST00000156825 AJUBAQ96IF1 538 aa14.75□□□□□ -0.05
MBD3-201ENST00000156825 ANAPC13Q9BS18 74 aa14.75□□□□□ -0.05
MBD3-201ENST00000156825 CCL24O00175 119 aa14.75□□□□□ -0.05
MBD3-201ENST00000156825 MAJINQ3KP22 176 aa14.74□□□□□ -0.05
MBD3-201ENST00000156825 SPAG8Q99932 426 aaPredicted RBP14.74□□□□□ -0.05
MBD3-201ENST00000156825 DEFB113Q30KQ7 82 aa14.74□□□□□ -0.05
MBD3-201ENST00000156825 LYPD6Q86Y78 171 aa14.74□□□□□ -0.05
MBD3-201ENST00000156825 LTAP01374 205 aa14.74□□□□□ -0.05
MBD3-201ENST00000156825 ZFP36P26651 326 aaKnown RBP14.74□□□□□ -0.05
MBD3-201ENST00000156825 GTSF1LQ9H1H1 148 aa14.74□□□□□ -0.05
MBD3-201ENST00000156825 KRTAP27-1Q3LI81 207 aa14.73□□□□□ -0.05
MBD3-201ENST00000156825 DKK2Q9UBU2 259 aa14.73□□□□□ -0.05
MBD3-201ENST00000156825 PLXNB3Q9ULL4 1909 aa14.73□□□□□ -0.05
MBD3-201ENST00000156825 CD5LO43866 347 aa14.73□□□□□ -0.05
MBD3-201ENST00000156825 C2orf16Q68DN1 1984 aa14.73□□□□□ -0.05
MBD3-201ENST00000156825 DEFB1P60022 68 aa14.73□□□□□ -0.05
MBD3-201ENST00000156825 IGLC2P0DOY2 106 aa14.73□□□□□ -0.05
MBD3-201ENST00000156825 IGLC3P0DOY3 106 aa14.73□□□□□ -0.05
MBD3-201ENST00000156825 UBE2V1Q13404 147 aa14.73□□□□□ -0.05
MBD3-201ENST00000156825 C10orf91Q5T1B1 145 aa14.73□□□□□ -0.05
MBD3-201ENST00000156825 ZNF48Q96MX3 618 aaPredicted RBP14.73□□□□□ -0.05
MBD3-201ENST00000156825 SNHG12Q9BXW3 62 aa14.73□□□□□ -0.05
MBD3-201ENST00000156825 E7EUB6 86 aa14.72□□□□□ -0.05
MBD3-201ENST00000156825 ANGP03950 147 aaKnown RBP14.72□□□□□ -0.05
MBD3-201ENST00000156825 PATE2Q6UY27 113 aa14.72□□□□□ -0.05
MBD3-201ENST00000156825 NAV3Q8IVL0 2385 aa14.72□□□□□ -0.05
MBD3-201ENST00000156825 NDUFA12Q9UI09 145 aa14.72□□□□□ -0.05
MBD3-201ENST00000156825 GAGE2BQ13066 116 aa14.72□□□□□ -0.05
MBD3-201ENST00000156825 GAGE2EQ4V326 116 aa14.72□□□□□ -0.05
MBD3-201ENST00000156825 PLA2G2EQ9NZK7 142 aa14.72□□□□□ -0.05
MBD3-201ENST00000156825 GAGE2DQ9UEU5 116 aa14.72□□□□□ -0.05
MBD3-201ENST00000156825 U3KQE9 123 aa14.72□□□□□ -0.05
MBD3-201ENST00000156825 I3L2K1 104 aa14.71□□□□□ -0.05
MBD3-201ENST00000156825 MSRB1Q9NZV6 116 aa14.71□□□□□ -0.05
MBD3-201ENST00000156825 CTSGP08311 255 aa14.71□□□□□ -0.05
MBD3-201ENST00000156825 C8orf31Q8N9H6 132 aa14.71□□□□□ -0.05
MBD3-201ENST00000156825 ADAMTSL5Q6ZMM2 481 aa14.71□□□□□ -0.05
MBD3-201ENST00000156825 TMEM141Q96I45 108 aa14.71□□□□□ -0.05
MBD3-201ENST00000156825 C20orf144Q9BQM9 153 aa14.71□□□□□ -0.05
MBD3-201ENST00000156825 JMJD1CQ15652 2540 aa14.71□□□□□ -0.05
MBD3-201ENST00000156825 ATP6V0BQ99437 205 aa14.71□□□□□ -0.06
MBD3-201ENST00000156825 SPINK8P0C7L1 97 aa14.7□□□□□ -0.06
MBD3-201ENST00000156825 MRPL53Q96EL3 112 aaKnown RBP14.7□□□□□ -0.06
MBD3-201ENST00000156825 GAGE2AQ6NT46 116 aa14.7□□□□□ -0.06
MBD3-201ENST00000156825 ESM1Q9NQ30 184 aa14.7□□□□□ -0.06
MBD3-201ENST00000156825 LGALS1P09382 135 aaKnown RBP14.7□□□□□ -0.06
MBD3-201ENST00000156825 APOC4P55056 127 aa14.7□□□□□ -0.06
MBD3-201ENST00000156825 Q8N9W7 124 aa14.69□□□□□ -0.06
MBD3-201ENST00000156825 WIPF2Q8TF74 440 aaPredicted RBP14.69□□□□□ -0.06
MBD3-201ENST00000156825 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.69□□□□□ -0.06
MBD3-201ENST00000156825 IGKV2-29A2NJV5 120 aaPredicted RBP14.69□□□□□ -0.06
MBD3-201ENST00000156825 COX11Q9Y6N1 276 aa14.69□□□□□ -0.06
MBD3-201ENST00000156825 Q8NA96 180 aa14.69□□□□□ -0.06
MBD3-201ENST00000156825 MRPL36Q9P0J6 103 aaKnown RBP14.69□□□□□ -0.06
MBD3-201ENST00000156825 C10orf105Q8TEF2 133 aa14.69□□□□□ -0.06
MBD3-201ENST00000156825 TLN2Q9Y4G6 2542 aa14.69□□□□□ -0.06
MBD3-201ENST00000156825 IGF2-ASQ6U949 168 aa14.68□□□□□ -0.06
MBD3-201ENST00000156825 DSCAML1Q8TD84 2053 aa14.68□□□□□ -0.06
MBD3-201ENST00000156825 IGLV11-55A0A075B6I3 123 aa14.68□□□□□ -0.06
MBD3-201ENST00000156825 TSSC4Q9Y5U2 329 aaPredicted RBP14.68□□□□□ -0.06
MBD3-201ENST00000156825 FOXI2Q6ZQN5 318 aa14.68□□□□□ -0.06
MBD3-201ENST00000156825 COL4A3Q01955 1670 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms