RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 AMN1Q8IY45 258 aa10.7□□□□□ -0.7
RTFDC1-201ENST00000023939 SONP18583 2426 aaKnown RBP10.69□□□□□ -0.7
RTFDC1-201ENST00000023939 MUC21A0A0G2JKD1 596 aa10.69□□□□□ -0.7
RTFDC1-201ENST00000023939 MUC21A0A140T8X8 626 aa10.69□□□□□ -0.7
RTFDC1-201ENST00000023939 LY6G6DO95868 133 aa10.69□□□□□ -0.7
RTFDC1-201ENST00000023939 PPBPP02775 128 aa10.69□□□□□ -0.7
RTFDC1-201ENST00000023939 LINC00614P0C842 121 aa10.69□□□□□ -0.7
RTFDC1-201ENST00000023939 PMCHP20382 165 aa10.69□□□□□ -0.7
RTFDC1-201ENST00000023939 RNASE4P34096 147 aaKnown RBP10.69□□□□□ -0.7
RTFDC1-201ENST00000023939 MRPL51Q4U2R6 128 aaKnown RBP10.69□□□□□ -0.7
RTFDC1-201ENST00000023939 MUC21Q5SSG8 566 aa10.69□□□□□ -0.7
RTFDC1-201ENST00000023939 EBLN2Q6P2I7 272 aa10.69□□□□□ -0.7
RTFDC1-201ENST00000023939 RNASEKQ6P5S7 137 aaKnown RBP10.69□□□□□ -0.7
RTFDC1-201ENST00000023939 ORMDL3Q8N138 153 aa10.69□□□□□ -0.7
RTFDC1-201ENST00000023939 RAX2Q96IS3 184 aa10.69□□□□□ -0.7
RTFDC1-201ENST00000023939 MSRB1Q9NZV6 116 aa10.69□□□□□ -0.7
RTFDC1-201ENST00000023939 ITPR2Q14571 2701 aa10.69□□□□□ -0.7
RTFDC1-201ENST00000023939 CD28P10747 220 aa10.68□□□□□ -0.7
RTFDC1-201ENST00000023939 RNF185Q96GF1 192 aa10.68□□□□□ -0.7
RTFDC1-201ENST00000023939 NAGKQ9UJ70 344 aa10.68□□□□□ -0.7
RTFDC1-201ENST00000023939 TSSC4Q9Y5U2 329 aaPredicted RBP10.68□□□□□ -0.7
RTFDC1-201ENST00000023939 A8MTW9 85 aa10.67□□□□□ -0.7
RTFDC1-201ENST00000023939 D6R8Y8 96 aa10.67□□□□□ -0.7
RTFDC1-201ENST00000023939 RAB4AP20338 218 aa10.67□□□□□ -0.7
RTFDC1-201ENST00000023939 ANXA2RQ3ZCQ2 193 aa10.67□□□□□ -0.7
RTFDC1-201ENST00000023939 FAM19A2Q8N3H0 131 aa10.67□□□□□ -0.7
RTFDC1-201ENST00000023939 OR10AG1Q8NH19 301 aa10.67□□□□□ -0.7
RTFDC1-201ENST00000023939 PRELID3AQ96N28 172 aa10.67□□□□□ -0.7
RTFDC1-201ENST00000023939 SMR3AQ99954 134 aa10.67□□□□□ -0.7
RTFDC1-201ENST00000023939 SCRT2Q9NQ03 307 aa10.67□□□□□ -0.7
RTFDC1-201ENST00000023939 SIGLEC8Q9NYZ4 499 aa10.67□□□□□ -0.7
RTFDC1-201ENST00000023939 LAMTOR2Q9Y2Q5 125 aa10.67□□□□□ -0.7
RTFDC1-201ENST00000023939 SCGB1D1O95968 90 aa10.67□□□□□ -0.7
RTFDC1-201ENST00000023939 TSPOP30536 169 aa10.67□□□□□ -0.7
RTFDC1-201ENST00000023939 ASIPP42127 132 aa10.67□□□□□ -0.7
RTFDC1-201ENST00000023939 DEFB114Q30KQ6 69 aa10.67□□□□□ -0.7
RTFDC1-201ENST00000023939 DUX3Q96PT4 197 aa10.67□□□□□ -0.7
RTFDC1-201ENST00000023939 TRAV25A0A0B4J276 109 aa10.66□□□□□ -0.7
RTFDC1-201ENST00000023939 C7orf71A4D174 169 aa10.66□□□□□ -0.7
RTFDC1-201ENST00000023939 J3KRW8 73 aa10.66□□□□□ -0.7
RTFDC1-201ENST00000023939 M0R2Z0 102 aa10.66□□□□□ -0.7
RTFDC1-201ENST00000023939 CCL24O00175 119 aa10.66□□□□□ -0.7
RTFDC1-201ENST00000023939 KIR3DS1Q14943 382 aa10.66□□□□□ -0.7
RTFDC1-201ENST00000023939 TDRG1Q3Y452 100 aa10.66□□□□□ -0.7
RTFDC1-201ENST00000023939 TMEM61Q8N0U2 210 aa10.66□□□□□ -0.7
RTFDC1-201ENST00000023939 ACANP16112 2415 aa10.65□□□□□ -0.7
RTFDC1-201ENST00000023939 H3BVH4 76 aa10.65□□□□□ -0.7
RTFDC1-201ENST00000023939 CD33P20138 364 aa10.65□□□□□ -0.7
RTFDC1-201ENST00000023939 CKS2P33552 79 aa10.65□□□□□ -0.7
RTFDC1-201ENST00000023939 SSTP61278 116 aa10.65□□□□□ -0.7
RTFDC1-201ENST00000023939 PKIAP61925 76 aa10.65□□□□□ -0.7
RTFDC1-201ENST00000023939 SMIM15Q7Z3B0 74 aa10.65□□□□□ -0.7
RTFDC1-201ENST00000023939 CITED2Q99967 270 aaPredicted RBP10.65□□□□□ -0.7
RTFDC1-201ENST00000023939 RNF114Q9Y508 228 aa10.65□□□□□ -0.7
RTFDC1-201ENST00000023939 MYO9AB2RTY4 2548 aa10.64□□□□□ -0.71
RTFDC1-201ENST00000023939 FOSL1P15407 271 aa10.64□□□□□ -0.71
RTFDC1-201ENST00000023939 PROK1P58294 105 aa10.64□□□□□ -0.71
RTFDC1-201ENST00000023939 SPANXN1Q5VSR9 72 aa10.64□□□□□ -0.71
RTFDC1-201ENST00000023939 AMTNQ6UX39 209 aa10.64□□□□□ -0.71
RTFDC1-201ENST00000023939 Q8N976 141 aa10.64□□□□□ -0.71
RTFDC1-201ENST00000023939 DYNLRB2Q8TF09 96 aa10.64□□□□□ -0.71
RTFDC1-201ENST00000023939 ANK3Q12955 4377 aaKnown RBP10.64□□□□□ -0.71
RTFDC1-201ENST00000023939 IGHV1-24A0A0C4DH33 117 aa10.64□□□□□ -0.71
RTFDC1-201ENST00000023939 NXPH4O95158 308 aa10.64□□□□□ -0.71
RTFDC1-201ENST00000023939 CDKN1BP46527 198 aa10.64□□□□□ -0.71
RTFDC1-201ENST00000023939 KRTDAPP60985 99 aa10.64□□□□□ -0.71
RTFDC1-201ENST00000023939 TEX43Q6ZNM6 134 aa10.64□□□□□ -0.71
RTFDC1-201ENST00000023939 SPAG8Q99932 426 aaPredicted RBP10.64□□□□□ -0.71
RTFDC1-201ENST00000023939 AP5S1Q9NUS5 200 aa10.64□□□□□ -0.71
RTFDC1-201ENST00000023939 C3orf79P0CE67 100 aa10.63□□□□□ -0.71
RTFDC1-201ENST00000023939 RNASE3P12724 160 aaKnown RBP10.63□□□□□ -0.71
RTFDC1-201ENST00000023939 HLA-DRB4P13762 266 aa10.63□□□□□ -0.71
RTFDC1-201ENST00000023939 S100A4P26447 101 aaKnown RBP10.63□□□□□ -0.71
RTFDC1-201ENST00000023939 FAM159AQ6UWV7 190 aa10.63□□□□□ -0.71
RTFDC1-201ENST00000023939 DEFB125Q8N687 156 aa10.63□□□□□ -0.71
RTFDC1-201ENST00000023939 PRSS3P2Q8NHM4 247 aa10.63□□□□□ -0.71
RTFDC1-201ENST00000023939 HLA-DRB4X5D2U9 266 aa10.63□□□□□ -0.71
RTFDC1-201ENST00000023939 OR4C46A6NHA9 309 aa10.62□□□□□ -0.71
RTFDC1-201ENST00000023939 TCF21O43680 179 aa10.62□□□□□ -0.71
RTFDC1-201ENST00000023939 EVI2AP22794 236 aa10.62□□□□□ -0.71
RTFDC1-201ENST00000023939 FA2HQ7L5A8 372 aa10.62□□□□□ -0.71
RTFDC1-201ENST00000023939 ZNF664Q8N3J9 261 aa10.62□□□□□ -0.71
RTFDC1-201ENST00000023939 LINC01546A6NGU7 62 aa10.61□□□□□ -0.71
RTFDC1-201ENST00000023939 TSTD3H0UI37 97 aa10.61□□□□□ -0.71
RTFDC1-201ENST00000023939 GNRH2O43555 120 aa10.61□□□□□ -0.71
RTFDC1-201ENST00000023939 NPYP01303 97 aa10.61□□□□□ -0.71
RTFDC1-201ENST00000023939 DEFB131AP59861 70 aa10.61□□□□□ -0.71
RTFDC1-201ENST00000023939 CD300EQ496F6 205 aaPredicted RBP10.61□□□□□ -0.71
RTFDC1-201ENST00000023939 C11orf44Q8N8P7 122 aa10.61□□□□□ -0.71
RTFDC1-201ENST00000023939 PHLDA3Q9Y5J5 127 aa10.61□□□□□ -0.71
RTFDC1-201ENST00000023939 TRAV12-3A0A0B4J271 114 aa10.61□□□□□ -0.71
RTFDC1-201ENST00000023939 A0A1W2PRX2 142 aa10.61□□□□□ -0.71
RTFDC1-201ENST00000023939 PRSS47A8MTI9 375 aa10.61□□□□□ -0.71
RTFDC1-201ENST00000023939 H3BMM0 161 aa10.61□□□□□ -0.71
RTFDC1-201ENST00000023939 CLUHP3Q96NS8 147 aa10.61□□□□□ -0.71
RTFDC1-201ENST00000023939 ZNF256Q9Y2P7 627 aaPredicted RBP10.61□□□□□ -0.71
RTFDC1-201ENST00000023939 ADARB2-AS1A8MUL3 147 aa10.6□□□□□ -0.71
RTFDC1-201ENST00000023939 SMKR1H3BMG3 65 aa10.6□□□□□ -0.71
RTFDC1-201ENST00000023939 CRXO43186 299 aaPredicted RBP10.6□□□□□ -0.71
RTFDC1-201ENST00000023939 LEPROTL1O95214 131 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms