RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Hist1h1tQ07133 208 aa13.55□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Q3U1D9 316 aa13.55□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Slamf6Q9ET39 351 aa13.55□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Gpx2Q9JHC0 190 aa13.55□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Ly96Q9JHF9 160 aa13.55□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Rps20P60867 119 aaKnown RBP13.54□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Vax1Q2NKI2 338 aa13.54□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Rnd1Q8BLR7 232 aa13.54□□□□□ -0.24
Ubr3-201ENSMUST00000055758 DptQ9QZZ6 201 aa13.54□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Smad4P97471 551 aa13.54□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Acsm5Q8BGA8 578 aa13.54□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Il1f10Q8R459 152 aa13.54□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Olfr355Q8VFP6 310 aa13.54□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Ssbp3Q9D032 388 aa13.54□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Dnase2P56542 353 aa13.54□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Eml2Q7TNG5 649 aa13.54□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Atg4dQ8BGV9 474 aa13.54□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Masp2Q91WP0 685 aa13.54□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Olfr1323Q8VF35 309 aa13.54□□□□□ -0.24
Ubr3-201ENSMUST00000055758 DscamQ9ERC8 2013 aa13.54□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Defb4P82019 63 aa13.54□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Sorl1O88307 2215 aaKnown RBP13.54□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Ankrd66J3QNN4 192 aa13.54□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Tff3Q62395 81 aa13.54□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Olfr753-ps1A0A140LHN3 164 aa13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Ucp3P56501 308 aa13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Gm5148Q8BGG2 154 aa13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Ubald2Q8BQH4 164 aa13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Tmprss5Q9ER04 455 aa13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 2410004P03RikA0A087WQY2 205 aa13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Olfr1382Q7TQT3 311 aa13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Q8CDS7 251 aa13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 CenpeQ6RT24 2474 aaKnown RBP13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Edil3O35474 480 aa13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 P18530 117 aa13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Fam89bQ9QUI1 189 aa13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 PtprvP70289 1705 aa13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 SvipQ3UZP4 77 aa13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Luzp4B1AV09 449 aa13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Gm15127B1AVZ5 449 aa13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Gm15107B1B0X0 449 aa13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Gm15085Q62012 449 aa13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Aadacl3A2A7Z8 408 aa13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Mex3bQ69Z36 601 aaKnown RBP13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Degs2Q8R2F2 323 aa13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Lrrc26Q91W20 331 aa13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Prss32E9Q409 334 aa13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Rpl31P62900 125 aaKnown RBP13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Rnf7Q9WTZ1 113 aa13.53□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Gm10097J3KMK7 105 aa13.52□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Gm5225J3QPL3 108 aa13.52□□□□□ -0.24
Ubr3-201ENSMUST00000055758 P01665 111 aa13.52□□□□□ -0.24
Ubr3-201ENSMUST00000055758 P01666 111 aa13.52□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Adra2aQ01338 450 aa13.52□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Vwc2lQ505H4 222 aa13.52□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Fbxo15Q9QZN0 433 aa13.52□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Fam219bQ14DQ1 197 aa13.52□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Ankrd55Q8BLD6 626 aa13.52□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Tmem160Q9D938 188 aa13.52□□□□□ -0.24
Ubr3-201ENSMUST00000055758 Tcl1b1P56840 116 aa13.52□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Prss44Q402U7 372 aa13.52□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Tra2aQ6PFR5 281 aaKnown RBP13.52□□□□□ -0.25
Ubr3-201ENSMUST00000055758 PhipQ8VDD9 1821 aaKnown RBP13.52□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Zdhhc23Q5Y5T3 425 aa13.52□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Olfr1381Q7TQT4 311 aa13.52□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Trav6n-7A0A075B6A6 116 aa13.52□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Hbb-b2P02089 147 aa13.52□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Foxa3P35584 353 aa13.52□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Lyplal1Q3UFF7 239 aa13.52□□□□□ -0.25
Ubr3-201ENSMUST00000055758 UmodQ91X17 642 aa13.52□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Loxl4Q924C6 757 aa13.52□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Unc119Q9Z2R6 240 aa13.52□□□□□ -0.25
Ubr3-201ENSMUST00000055758 InmtP40936 264 aa13.51□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Rnase9P60154 184 aa13.51□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Hoxa5P09021 270 aa13.51□□□□□ -0.25
Ubr3-201ENSMUST00000055758 MdkP12025 140 aa13.51□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Rnase2bO35292 155 aa13.51□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Snrnp40Q6PE01 358 aa13.51□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Plxdc1Q91ZV7 500 aa13.51□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Tmem240B2RWJ3 173 aa13.51□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Gm9944Q8C559 102 aa13.51□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Olfr178E9Q9T3 319 aa13.51□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Znf503Q7TMA2 652 aa13.51□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Bpifa5Q9CQX3 270 aa13.51□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Rnase2O35291 155 aa13.51□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Olfr905L7N1X5 310 aa13.5□□□□□ -0.25
Ubr3-201ENSMUST00000055758 P01801 115 aa13.5□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Foxr2Q3UM89 302 aa13.5□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Trav16A0A075B653 116 aa13.5□□□□□ -0.25
Ubr3-201ENSMUST00000055758 P06344 263 aa13.5□□□□□ -0.25
Ubr3-201ENSMUST00000055758 9430097D07RikQ8BS47 195 aa13.5□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Gm10190Q8BSD7 107 aa13.5□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Prdx2Q61171 198 aaKnown RBP13.5□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Ms4a13Q5FWC3 203 aa13.5□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Dll1Q61483 722 aa13.5□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Olfr553Q7TRS6 326 aa13.5□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Rnf182Q8C432 247 aa13.5□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Wipi1Q8R3E3 446 aa13.5□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Dtx2Q8R3P2 619 aa13.5□□□□□ -0.25
Ubr3-201ENSMUST00000055758 Myct1Q8R411 188 aa13.5□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 38.8 ms