RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 RAB5AP20339 215 aa9.79□□□□□ -0.84
PHGDH-221ENST00000641573 SMUG1Q53HV7 270 aa9.79□□□□□ -0.84
PHGDH-221ENST00000641573 FAM210BQ96KR6 192 aa9.79□□□□□ -0.84
PHGDH-221ENST00000641573 PYGO2Q9BRQ0 406 aa9.79□□□□□ -0.84
PHGDH-221ENST00000641573 RPP21Q9H633 154 aaKnown RBP9.79□□□□□ -0.84
PHGDH-221ENST00000641573 TMA7Q9Y2S6 64 aaKnown RBP9.79□□□□□ -0.84
PHGDH-221ENST00000641573 SH2D1AO60880 128 aa9.78□□□□□ -0.84
PHGDH-221ENST00000641573 CA1P00915 261 aaPredicted RBP9.78□□□□□ -0.84
PHGDH-221ENST00000641573 PF4P02776 101 aa9.78□□□□□ -0.84
PHGDH-221ENST00000641573 BEAN1Q3B7T3 259 aa9.78□□□□□ -0.84
PHGDH-221ENST00000641573 OR4B1Q8NGF8 309 aa9.78□□□□□ -0.84
PHGDH-221ENST00000641573 MRAPQ8TCY5 172 aa9.78□□□□□ -0.84
PHGDH-221ENST00000641573 SMIM27A0A1W2PRY6 76 aa9.77□□□□□ -0.85
PHGDH-221ENST00000641573 G3V4G9 280 aa9.77□□□□□ -0.85
PHGDH-221ENST00000641573 SAP30O75446 220 aa9.77□□□□□ -0.85
PHGDH-221ENST00000641573 PRB2P02812 416 aaPredicted RBP9.77□□□□□ -0.85
PHGDH-221ENST00000641573 ZNF80P51504 273 aaPredicted RBP9.77□□□□□ -0.85
PHGDH-221ENST00000641573 TCL1AP56279 114 aa9.77□□□□□ -0.85
PHGDH-221ENST00000641573 CT83Q5H943 113 aa9.77□□□□□ -0.85
PHGDH-221ENST00000641573 FAM162BQ5T6X4 162 aa9.77□□□□□ -0.85
PHGDH-221ENST00000641573 LINC00482Q8N8I6 264 aa9.77□□□□□ -0.85
PHGDH-221ENST00000641573 OR2D3Q8NGH3 330 aa9.77□□□□□ -0.85
PHGDH-221ENST00000641573 SPAG8Q99932 426 aaPredicted RBP9.77□□□□□ -0.85
PHGDH-221ENST00000641573 LENEPQ9Y5L5 61 aa9.77□□□□□ -0.85
PHGDH-221ENST00000641573 TENM3Q9P273 2699 aa9.76□□□□□ -0.85
PHGDH-221ENST00000641573 TRAV9-1A0A075B6T8 112 aa9.76□□□□□ -0.85
PHGDH-221ENST00000641573 IZUMO1RA6ND01 250 aa9.76□□□□□ -0.85
PHGDH-221ENST00000641573 OR4C46A6NHA9 309 aa9.76□□□□□ -0.85
PHGDH-221ENST00000641573 CD33P20138 364 aa9.76□□□□□ -0.85
PHGDH-221ENST00000641573 RPS10P46783 165 aaKnown RBP9.76□□□□□ -0.85
PHGDH-221ENST00000641573 GDF5OSQ5U4N7 250 aa9.76□□□□□ -0.85
PHGDH-221ENST00000641573 EBLN2Q6P2I7 272 aa9.76□□□□□ -0.85
PHGDH-221ENST00000641573 TSKUQ8WUA8 353 aa9.76□□□□□ -0.85
PHGDH-221ENST00000641573 BTF3L4Q96K17 158 aa9.76□□□□□ -0.85
PHGDH-221ENST00000641573 A0A0J9YX75 114 aa9.75□□□□□ -0.85
PHGDH-221ENST00000641573 FABP5P3A8MUU1 101 aa9.75□□□□□ -0.85
PHGDH-221ENST00000641573 A8MWL6 223 aa9.75□□□□□ -0.85
PHGDH-221ENST00000641573 DEFB131AP59861 70 aa9.75□□□□□ -0.85
PHGDH-221ENST00000641573 RPL19P84098 196 aaKnown RBP9.75□□□□□ -0.85
PHGDH-221ENST00000641573 FOXI2Q6ZQN5 318 aa9.75□□□□□ -0.85
PHGDH-221ENST00000641573 FAM19A4Q96LR4 140 aa9.75□□□□□ -0.85
PHGDH-221ENST00000641573 SAV1Q9H4B6 383 aaPredicted RBP9.75□□□□□ -0.85
PHGDH-221ENST00000641573 TRBV7-9A0A0J9YWB2 115 aa9.74□□□□□ -0.85
PHGDH-221ENST00000641573 TMEM189A5PLL7 270 aa9.74□□□□□ -0.85
PHGDH-221ENST00000641573 DUSP14O95147 198 aaKnown RBP9.74□□□□□ -0.85
PHGDH-221ENST00000641573 IGLV1-51P01701 117 aa9.74□□□□□ -0.85
PHGDH-221ENST00000641573 TYMSP04818 313 aa9.74□□□□□ -0.85
PHGDH-221ENST00000641573 KPRPQ5T749 579 aaPredicted RBP9.74□□□□□ -0.85
PHGDH-221ENST00000641573 ZFAND2AQ8N6M9 145 aa9.74□□□□□ -0.85
PHGDH-221ENST00000641573 OR2K2Q8NGT1 345 aa9.74□□□□□ -0.85
PHGDH-221ENST00000641573 NEU1Q99519 415 aa9.74□□□□□ -0.85
PHGDH-221ENST00000641573 MAP6D1Q9H9H5 199 aa9.74□□□□□ -0.85
PHGDH-221ENST00000641573 NAT8BQ9UHF3 227 aa9.74□□□□□ -0.85
PHGDH-221ENST00000641573 ZNF256Q9Y2P7 627 aaPredicted RBP9.74□□□□□ -0.85
PHGDH-221ENST00000641573 J3KRW8 73 aa9.73□□□□□ -0.85
PHGDH-221ENST00000641573 GZMBP10144 247 aa9.73□□□□□ -0.85
PHGDH-221ENST00000641573 CRISP2P16562 243 aa9.73□□□□□ -0.85
PHGDH-221ENST00000641573 PRR9Q5T870 116 aa9.73□□□□□ -0.85
PHGDH-221ENST00000641573 NUP35Q8NFH5 326 aa9.73□□□□□ -0.85
PHGDH-221ENST00000641573 GTSF1Q8WW33 167 aa9.73□□□□□ -0.85
PHGDH-221ENST00000641573 GFRA4Q9GZZ7 299 aa9.73□□□□□ -0.85
PHGDH-221ENST00000641573 SRD5A3Q9H8P0 318 aa9.73□□□□□ -0.85
PHGDH-221ENST00000641573 TMSB15BA0A087X1C1 80 aa9.72□□□□□ -0.85
PHGDH-221ENST00000641573 FAM231BA6NCW3 169 aa9.72□□□□□ -0.85
PHGDH-221ENST00000641573 KNCNA6PVL3 124 aa9.72□□□□□ -0.85
PHGDH-221ENST00000641573 HIGD1CA8MV81 97 aa9.72□□□□□ -0.85
PHGDH-221ENST00000641573 C1orf196B1AJZ1 125 aa9.72□□□□□ -0.85
PHGDH-221ENST00000641573 SPINK4O60575 86 aa9.72□□□□□ -0.85
PHGDH-221ENST00000641573 ORM1P02763 201 aa9.72□□□□□ -0.85
PHGDH-221ENST00000641573 GPX1P07203 203 aa9.72□□□□□ -0.85
PHGDH-221ENST00000641573 LEPP41159 167 aa9.72□□□□□ -0.85
PHGDH-221ENST00000641573 RPS20P60866 119 aaKnown RBP9.72□□□□□ -0.85
PHGDH-221ENST00000641573 SAMD5Q5TGI4 173 aa9.72□□□□□ -0.85
PHGDH-221ENST00000641573 APRG1Q8IVJ8 170 aa9.72□□□□□ -0.85
PHGDH-221ENST00000641573 ODF3Q96PU9 254 aa9.72□□□□□ -0.85
PHGDH-221ENST00000641573 XKRY2A2RUG3 117 aa9.71□□□□□ -0.86
PHGDH-221ENST00000641573 IGKV3-20P01619 116 aa9.71□□□□□ -0.86
PHGDH-221ENST00000641573 RNASE4P34096 147 aaKnown RBP9.71□□□□□ -0.86
PHGDH-221ENST00000641573 ZNF124Q15973 351 aa9.71□□□□□ -0.86
PHGDH-221ENST00000641573 LINC01559Q495D7 138 aa9.71□□□□□ -0.86
PHGDH-221ENST00000641573 ACTL10Q5JWF8 245 aa9.71□□□□□ -0.86
PHGDH-221ENST00000641573 PGLYRP4Q96LB8 373 aa9.71□□□□□ -0.86
PHGDH-221ENST00000641573 TRAV21A0A0B4J279 112 aa9.7□□□□□ -0.86
PHGDH-221ENST00000641573 KLLNB2CW77 178 aa9.7□□□□□ -0.86
PHGDH-221ENST00000641573 HLA-DRB4P13762 266 aa9.7□□□□□ -0.86
PHGDH-221ENST00000641573 CMC4P56277 68 aaPredicted RBP9.7□□□□□ -0.86
PHGDH-221ENST00000641573 KIR3DS1Q14943 382 aa9.7□□□□□ -0.86
PHGDH-221ENST00000641573 ODF3L2Q3SX64 289 aa9.7□□□□□ -0.86
PHGDH-221ENST00000641573 MRPL54Q6P161 138 aaKnown RBP9.7□□□□□ -0.86
PHGDH-221ENST00000641573 Q6ZQT7 251 aa9.7□□□□□ -0.86
PHGDH-221ENST00000641573 C11orf21Q9P2W6 132 aa9.7□□□□□ -0.86
PHGDH-221ENST00000641573 HLA-DRB4X5D2U9 266 aa9.7□□□□□ -0.86
PHGDH-221ENST00000641573 IGKV3D-20A0A0C4DH25 116 aa9.69□□□□□ -0.86
PHGDH-221ENST00000641573 H3BMM0 161 aa9.69□□□□□ -0.86
PHGDH-221ENST00000641573 TRGC2P03986 189 aa9.69□□□□□ -0.86
PHGDH-221ENST00000641573 FRMD6-AS1P0C7T7 363 aa9.69□□□□□ -0.86
PHGDH-221ENST00000641573 TSPOP30536 169 aa9.69□□□□□ -0.86
PHGDH-221ENST00000641573 FOXA3P55318 350 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-221ENST00000641573 RAB5BP61020 215 aa9.69□□□□□ -0.86
PHGDH-221ENST00000641573 Q6AWC8 147 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms