RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 NAV2Q8IVL1 2488 aa6.32□□□□□ -1.4
PNKP-231ENST00000640501 TRAV2A0A0B4J234 112 aa6.32□□□□□ -1.4
PNKP-231ENST00000640501 A0A1B0GUS0 222 aa6.32□□□□□ -1.4
PNKP-231ENST00000640501 LINC01619G3V211 115 aa6.32□□□□□ -1.4
PNKP-231ENST00000640501 BTF3P20290 206 aaKnown RBP6.32□□□□□ -1.4
PNKP-231ENST00000640501 S100A4P26447 101 aaKnown RBP6.32□□□□□ -1.4
PNKP-231ENST00000640501 CKS2P33552 79 aa6.32□□□□□ -1.4
PNKP-231ENST00000640501 ASIPP42127 132 aa6.32□□□□□ -1.4
PNKP-231ENST00000640501 SPANXN1Q5VSR9 72 aa6.32□□□□□ -1.4
PNKP-231ENST00000640501 LCNL1Q6ZST4 164 aa6.32□□□□□ -1.4
PNKP-231ENST00000640501 KRTAP1-3Q8IUG1 177 aa6.32□□□□□ -1.4
PNKP-231ENST00000640501 WFDC11Q8NEX6 87 aa6.32□□□□□ -1.4
PNKP-231ENST00000640501 C4orf3Q8WVX3 66 aa6.32□□□□□ -1.4
PNKP-231ENST00000640501 PRELID3AQ96N28 172 aa6.32□□□□□ -1.4
PNKP-231ENST00000640501 RCHY1Q96PM5 261 aa6.32□□□□□ -1.4
PNKP-231ENST00000640501 AP5S1Q9NUS5 200 aa6.32□□□□□ -1.4
PNKP-231ENST00000640501 USP9YO00507 2555 aaPredicted RBP6.31□□□□□ -1.4
PNKP-231ENST00000640501 TMEM213A2RRL7 107 aa6.31□□□□□ -1.4
PNKP-231ENST00000640501 NUPR1O60356 82 aa6.31□□□□□ -1.4
PNKP-231ENST00000640501 LEPROTL1O95214 131 aa6.31□□□□□ -1.4
PNKP-231ENST00000640501 DDTP30046 118 aa6.31□□□□□ -1.4
PNKP-231ENST00000640501 HOXD3P31249 432 aaPredicted RBP6.31□□□□□ -1.4
PNKP-231ENST00000640501 ZNF80P51504 273 aaPredicted RBP6.31□□□□□ -1.4
PNKP-231ENST00000640501 LINC00310P59036 64 aa6.31□□□□□ -1.4
PNKP-231ENST00000640501 Q6ZWC4 215 aa6.31□□□□□ -1.4
PNKP-231ENST00000640501 OR10AG1Q8NH19 301 aa6.31□□□□□ -1.4
PNKP-231ENST00000640501 ZNF418Q8TF45 676 aaPredicted RBP6.31□□□□□ -1.4
PNKP-231ENST00000640501 MAP1LC3CQ9BXW4 147 aa6.31□□□□□ -1.4
PNKP-231ENST00000640501 MAP1LC3AQ9H492 121 aa6.31□□□□□ -1.4
PNKP-231ENST00000640501 YAE1D1Q9NRH1 226 aa6.31□□□□□ -1.4
PNKP-231ENST00000640501 TMEM160Q9NX00 188 aa6.31□□□□□ -1.4
PNKP-231ENST00000640501 CENPEQ02224 2701 aa6.31□□□□□ -1.4
PNKP-231ENST00000640501 IGKV3-7A0A075B6H7 116 aa6.3□□□□□ -1.4
PNKP-231ENST00000640501 IGHV4OR15-8A0A075B7B6 117 aa6.3□□□□□ -1.4
PNKP-231ENST00000640501 A0A087WW49 117 aa6.3□□□□□ -1.4
PNKP-231ENST00000640501 FAM181BA6NEQ2 426 aa6.3□□□□□ -1.4
PNKP-231ENST00000640501 PPP1R17O96001 155 aa6.3□□□□□ -1.4
PNKP-231ENST00000640501 SYNJ2BPP57105 145 aa6.3□□□□□ -1.4
PNKP-231ENST00000640501 KHDC1LQ5JSQ8 128 aa6.3□□□□□ -1.4
PNKP-231ENST00000640501 FAM159AQ6UWV7 190 aa6.3□□□□□ -1.4
PNKP-231ENST00000640501 APRG1Q8IVJ8 170 aa6.3□□□□□ -1.4
PNKP-231ENST00000640501 DCANP1Q8TF63 244 aa6.3□□□□□ -1.4
PNKP-231ENST00000640501 TMEM70Q9BUB7 260 aa6.3□□□□□ -1.4
PNKP-231ENST00000640501 MS4A6AQ9H2W1 248 aa6.3□□□□□ -1.4
PNKP-231ENST00000640501 NXT2Q9NPJ8 142 aaKnown RBP6.3□□□□□ -1.4
PNKP-231ENST00000640501 PHLDA3Q9Y5J5 127 aa6.3□□□□□ -1.4
PNKP-231ENST00000640501 U3KQK5 164 aa6.3□□□□□ -1.4
PNKP-231ENST00000640501 CREBBPQ92793 2442 aa6.29□□□□□ -1.4
PNKP-231ENST00000640501 IGHV4-4A0A075B6R2 117 aa6.29□□□□□ -1.4
PNKP-231ENST00000640501 DNAJC9-AS1A6NH13 148 aa6.29□□□□□ -1.4
PNKP-231ENST00000640501 C2orf70A6NJV1 201 aa6.29□□□□□ -1.4
PNKP-231ENST00000640501 HSBP1L1C9JCN9 74 aa6.29□□□□□ -1.4
PNKP-231ENST00000640501 D6R8Y8 96 aa6.29□□□□□ -1.4
PNKP-231ENST00000640501 SNAI2O43623 268 aa6.29□□□□□ -1.4
PNKP-231ENST00000640501 TCF21O43680 179 aa6.29□□□□□ -1.4
PNKP-231ENST00000640501 RNASE4P34096 147 aaKnown RBP6.29□□□□□ -1.4
PNKP-231ENST00000640501 MRPL51Q4U2R6 128 aaKnown RBP6.29□□□□□ -1.4
PNKP-231ENST00000640501 LBHQ53QV2 105 aaPredicted RBP6.29□□□□□ -1.4
PNKP-231ENST00000640501 TEX43Q6ZNM6 134 aa6.29□□□□□ -1.4
PNKP-231ENST00000640501 FAM19A2Q8N3H0 131 aa6.29□□□□□ -1.4
PNKP-231ENST00000640501 OR1N2Q8NGR9 330 aa6.29□□□□□ -1.4
PNKP-231ENST00000640501 DYNLRB2Q8TF09 96 aa6.29□□□□□ -1.4
PNKP-231ENST00000640501 C20orf173Q96LM9 149 aa6.29□□□□□ -1.4
PNKP-231ENST00000640501 FAM19A4Q96LR4 140 aa6.29□□□□□ -1.4
PNKP-231ENST00000640501 KMT2BQ9UMN6 2715 aaPredicted RBP6.28□□□□□ -1.4
PNKP-231ENST00000640501 IGKV3D-20A0A0C4DH25 116 aa6.28□□□□□ -1.4
PNKP-231ENST00000640501 IGHV1-24A0A0C4DH33 117 aa6.28□□□□□ -1.4
PNKP-231ENST00000640501 OR4C46A6NHA9 309 aa6.28□□□□□ -1.4
PNKP-231ENST00000640501 K7EQG2 157 aa6.28□□□□□ -1.4
PNKP-231ENST00000640501 CSN3P07498 182 aa6.28□□□□□ -1.4
PNKP-231ENST00000640501 RNASE1P07998 156 aaKnown RBP6.28□□□□□ -1.4
PNKP-231ENST00000640501 C3orf79P0CE67 100 aa6.28□□□□□ -1.4
PNKP-231ENST00000640501 SMIM17P0DL12 118 aa6.28□□□□□ -1.4
PNKP-231ENST00000640501 CMC4P56277 68 aaPredicted RBP6.28□□□□□ -1.4
PNKP-231ENST00000640501 TCTEX1D4Q5JR98 221 aa6.28□□□□□ -1.4
PNKP-231ENST00000640501 PSMG4Q5JS54 123 aa6.28□□□□□ -1.4
PNKP-231ENST00000640501 PET117Q6UWS5 81 aa6.28□□□□□ -1.4
PNKP-231ENST00000640501 FOXI2Q6ZQN5 318 aa6.28□□□□□ -1.4
PNKP-231ENST00000640501 MRPL52Q86TS9 123 aaKnown RBP6.28□□□□□ -1.4
PNKP-231ENST00000640501 WFDC3Q8IUB2 231 aa6.28□□□□□ -1.4
PNKP-231ENST00000640501 AMN1Q8IY45 258 aa6.28□□□□□ -1.4
PNKP-231ENST00000640501 ZFAND2AQ8N6M9 145 aa6.28□□□□□ -1.4
PNKP-231ENST00000640501 SYT8Q8NBV8 401 aa6.28□□□□□ -1.4
PNKP-231ENST00000640501 KLHL30-AS1Q8NEE0 82 aa6.28□□□□□ -1.4
PNKP-231ENST00000640501 OR11H1Q8NG94 326 aa6.28□□□□□ -1.4
PNKP-231ENST00000640501 OR9G4Q8NGQ1 327 aa6.28□□□□□ -1.4
PNKP-231ENST00000640501 MRAP2Q96G30 205 aa6.28□□□□□ -1.4
PNKP-231ENST00000640501 AP1S3Q96PC3 154 aa6.28□□□□□ -1.4
PNKP-231ENST00000640501 C20orf144Q9BQM9 153 aa6.28□□□□□ -1.4
PNKP-231ENST00000640501 ASH1LQ9NR48 2969 aaKnown RBP6.28□□□□□ -1.4
PNKP-231ENST00000640501 CRYBG3Q68DQ2 2970 aa6.27□□□□□ -1.41
PNKP-231ENST00000640501 TRAV25A0A0B4J276 109 aa6.27□□□□□ -1.41
PNKP-231ENST00000640501 KIR2DL5BA0A0G2JN68 375 aa6.27□□□□□ -1.41
PNKP-231ENST00000640501 KIR2DL5BA0A0G2JPC4 375 aa6.27□□□□□ -1.41
PNKP-231ENST00000640501 A0A0J9YX75 114 aa6.27□□□□□ -1.41
PNKP-231ENST00000640501 C7orf71A4D174 169 aa6.27□□□□□ -1.41
PNKP-231ENST00000640501 LINC00587B1AMM8 73 aa6.27□□□□□ -1.41
PNKP-231ENST00000640501 KLLNB2CW77 178 aa6.27□□□□□ -1.41
PNKP-231ENST00000640501 K7EMI3 77 aa6.27□□□□□ -1.41
PNKP-231ENST00000640501 CRXO43186 299 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms