RNA–Protein interactions for RNA: ENST00000640460.1

PAX6-272, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-272ENST00000640460 FAM231DQ6ZW35 169 aa9.29□□□□□ -0.92
PAX6-272ENST00000640460 C16orf92Q96LL3 132 aa9.29□□□□□ -0.92
PAX6-272ENST00000640460 WWC2-AS2Q96NR7 200 aa9.29□□□□□ -0.92
PAX6-272ENST00000640460 IMMP2LQ96T52 175 aa9.29□□□□□ -0.92
PAX6-272ENST00000640460 MAP6D1Q9H9H5 199 aa9.29□□□□□ -0.92
PAX6-272ENST00000640460 AGRNO00468 2067 aa9.29□□□□□ -0.92
PAX6-272ENST00000640460 TENM3Q9P273 2699 aa9.29□□□□□ -0.92
PAX6-272ENST00000640460 C19orf71A6NCJ1 209 aa9.28□□□□□ -0.92
PAX6-272ENST00000640460 CA1P00915 261 aaPredicted RBP9.28□□□□□ -0.92
PAX6-272ENST00000640460 ERCC8Q13216 396 aa9.28□□□□□ -0.92
PAX6-272ENST00000640460 PRR27Q6MZM9 219 aa9.28□□□□□ -0.92
PAX6-272ENST00000640460 APRG1Q8IVJ8 170 aa9.28□□□□□ -0.92
PAX6-272ENST00000640460 ZC2HC1AQ96GY0 325 aa9.28□□□□□ -0.92
PAX6-272ENST00000640460 FAM210BQ96KR6 192 aa9.28□□□□□ -0.92
PAX6-272ENST00000640460 C8orf49Q96NF6 230 aa9.28□□□□□ -0.92
PAX6-272ENST00000640460 FAM110AQ9BQ89 295 aa9.28□□□□□ -0.92
PAX6-272ENST00000640460 SRD5A3Q9H8P0 318 aa9.28□□□□□ -0.92
PAX6-272ENST00000640460 IL36BQ9NZH7 164 aa9.28□□□□□ -0.92
PAX6-272ENST00000640460 ZFP30Q9Y2G7 519 aa9.28□□□□□ -0.92
PAX6-272ENST00000640460 SERTM2A0A1B0GWG4 89 aa9.28□□□□□ -0.92
PAX6-272ENST00000640460 K7EQM0 130 aa9.28□□□□□ -0.92
PAX6-272ENST00000640460 A0A1W2PPQ1 181 aa9.27□□□□□ -0.93
PAX6-272ENST00000640460 RBMY1BA6NDE4 496 aaKnown RBP9.27□□□□□ -0.93
PAX6-272ENST00000640460 RBMY1EA6NEQ0 496 aaKnown RBP9.27□□□□□ -0.93
PAX6-272ENST00000640460 RBMY1DP0C7P1 496 aaKnown RBP9.27□□□□□ -0.93
PAX6-272ENST00000640460 ZNF688P0C7X2 276 aa9.27□□□□□ -0.93
PAX6-272ENST00000640460 DEFB131AP59861 70 aa9.27□□□□□ -0.93
PAX6-272ENST00000640460 DEFB1P60022 68 aa9.27□□□□□ -0.93
PAX6-272ENST00000640460 Q8TAT8 98 aa9.27□□□□□ -0.93
PAX6-272ENST00000640460 MRPL53Q96EL3 112 aaKnown RBP9.27□□□□□ -0.93
PAX6-272ENST00000640460 RCHY1Q96PM5 261 aa9.27□□□□□ -0.93
PAX6-272ENST00000640460 TM2D3Q9BRN9 247 aa9.27□□□□□ -0.93
PAX6-272ENST00000640460 AGPAT4-IT1Q9H0P7 198 aa9.27□□□□□ -0.93
PAX6-272ENST00000640460 RBAKDNA6NC62 111 aa9.26□□□□□ -0.93
PAX6-272ENST00000640460 ZNF705GA8MUZ8 300 aaPredicted RBP9.26□□□□□ -0.93
PAX6-272ENST00000640460 S100PP25815 95 aa9.26□□□□□ -0.93
PAX6-272ENST00000640460 RPS10P46783 165 aaKnown RBP9.26□□□□□ -0.93
PAX6-272ENST00000640460 CMC4P56277 68 aaPredicted RBP9.26□□□□□ -0.93
PAX6-272ENST00000640460 COX8CQ7Z4L0 72 aa9.26□□□□□ -0.93
PAX6-272ENST00000640460 ZNF492Q9P255 531 aa9.26□□□□□ -0.93
PAX6-272ENST00000640460 SMIM27A0A1W2PRY6 76 aa9.25□□□□□ -0.93
PAX6-272ENST00000640460 ZNF705DP0CH99 300 aaPredicted RBP9.25□□□□□ -0.93
PAX6-272ENST00000640460 ZNF705BP0CI00 300 aaPredicted RBP9.25□□□□□ -0.93
PAX6-272ENST00000640460 CLEC5AQ9NY25 188 aa9.25□□□□□ -0.93
PAX6-272ENST00000640460 STAB2Q8WWQ8 2551 aa9.25□□□□□ -0.93
PAX6-272ENST00000640460 NPIPB6E9PJ23 425 aa9.25□□□□□ -0.93
PAX6-272ENST00000640460 PHOX2AO14813 284 aa9.25□□□□□ -0.93
PAX6-272ENST00000640460 GATCO43716 136 aaKnown RBP9.25□□□□□ -0.93
PAX6-272ENST00000640460 ZNF80P51504 273 aaPredicted RBP9.25□□□□□ -0.93
PAX6-272ENST00000640460 PSMG4Q5JS54 123 aa9.25□□□□□ -0.93
PAX6-272ENST00000640460 KCNIP4Q6PIL6 250 aa9.25□□□□□ -0.93
PAX6-272ENST00000640460 ZFP82Q8N141 532 aa9.25□□□□□ -0.93
PAX6-272ENST00000640460 ZMAT4Q9H898 229 aa9.25□□□□□ -0.93
PAX6-272ENST00000640460 TRGC2P03986 189 aa9.24□□□□□ -0.93
PAX6-272ENST00000640460 TYMSP04818 313 aa9.24□□□□□ -0.93
PAX6-272ENST00000640460 SNRPD3P62318 126 aaKnown RBP9.24□□□□□ -0.93
PAX6-272ENST00000640460 C9orf47Q6ZRZ4 202 aa9.24□□□□□ -0.93
PAX6-272ENST00000640460 ZNF575Q86XF7 245 aa9.24□□□□□ -0.93
PAX6-272ENST00000640460 FBLL1A6NHQ2 334 aaKnown RBP9.23□□□□□ -0.93
PAX6-272ENST00000640460 F6UB75 175 aa9.23□□□□□ -0.93
PAX6-272ENST00000640460 TCL1AP56279 114 aa9.23□□□□□ -0.93
PAX6-272ENST00000640460 SAPCD1Q5SSQ6 148 aa9.23□□□□□ -0.93
PAX6-272ENST00000640460 ZNF738Q8NE65 137 aa9.23□□□□□ -0.93
PAX6-272ENST00000640460 BIN3Q9NQY0 253 aa9.23□□□□□ -0.93
PAX6-272ENST00000640460 LOC102724200A0A096LPH7 203 aaPredicted RBP9.22□□□□□ -0.93
PAX6-272ENST00000640460 P01737 135 aa9.22□□□□□ -0.93
PAX6-272ENST00000640460 ID1P41134 155 aa9.22□□□□□ -0.93
PAX6-272ENST00000640460 RPL19P84098 196 aaKnown RBP9.22□□□□□ -0.93
PAX6-272ENST00000640460 SAMD13Q5VXD3 122 aa9.22□□□□□ -0.93
PAX6-272ENST00000640460 TSKUQ8WUA8 353 aa9.22□□□□□ -0.93
PAX6-272ENST00000640460 GTSF1Q8WW33 167 aa9.22□□□□□ -0.93
PAX6-272ENST00000640460 RPP21Q9H633 154 aaKnown RBP9.22□□□□□ -0.93
PAX6-272ENST00000640460 PPP1R14DQ9NXH3 145 aa9.22□□□□□ -0.93
PAX6-272ENST00000640460 KNCNA6PVL3 124 aa9.22□□□□□ -0.93
PAX6-272ENST00000640460 SPINK4O60575 86 aa9.22□□□□□ -0.93
PAX6-272ENST00000640460 CT45A10P0DMU9 189 aa9.22□□□□□ -0.93
PAX6-272ENST00000640460 RPL35AP18077 110 aaKnown RBP9.22□□□□□ -0.93
PAX6-272ENST00000640460 NUP35Q8NFH5 326 aa9.22□□□□□ -0.93
PAX6-272ENST00000640460 DAZAP1Q96EP5 407 aaKnown RBP9.22□□□□□ -0.93
PAX6-272ENST00000640460 NEU1Q99519 415 aa9.22□□□□□ -0.93
PAX6-272ENST00000640460 LOC105371267A0A1B0GV96 52 aa9.21□□□□□ -0.94
PAX6-272ENST00000640460 C1orf196B1AJZ1 125 aa9.21□□□□□ -0.94
PAX6-272ENST00000640460 SH2D1AO60880 128 aa9.21□□□□□ -0.94
PAX6-272ENST00000640460 GZMBP10144 247 aa9.21□□□□□ -0.94
PAX6-272ENST00000640460 ZNF138P52744 262 aa9.21□□□□□ -0.94
PAX6-272ENST00000640460 CT83Q5H943 113 aa9.21□□□□□ -0.94
PAX6-272ENST00000640460 ACTL10Q5JWF8 245 aa9.21□□□□□ -0.94
PAX6-272ENST00000640460 GDF5OSQ5U4N7 250 aa9.21□□□□□ -0.94
PAX6-272ENST00000640460 BTF3L4Q96K17 158 aa9.21□□□□□ -0.94
PAX6-272ENST00000640460 SPATA25Q9BR10 227 aa9.21□□□□□ -0.94
PAX6-272ENST00000640460 TRAV9-1A0A075B6T8 112 aa9.2□□□□□ -0.94
PAX6-272ENST00000640460 TMEM78Q5T7P6 136 aa9.2□□□□□ -0.94
PAX6-272ENST00000640460 Q6ZQT7 251 aa9.2□□□□□ -0.94
PAX6-272ENST00000640460 OR8A1Q8NGG7 326 aa9.2□□□□□ -0.94
PAX6-272ENST00000640460 OR2D3Q8NGH3 330 aa9.2□□□□□ -0.94
PAX6-272ENST00000640460 FRZBQ92765 325 aa9.2□□□□□ -0.94
PAX6-272ENST00000640460 LINC00477Q96M19 166 aa9.2□□□□□ -0.94
PAX6-272ENST00000640460 RETNQ9HD89 108 aa9.2□□□□□ -0.94
PAX6-272ENST00000640460 HIGD1CA8MV81 97 aa9.19□□□□□ -0.94
PAX6-272ENST00000640460 SMUG1Q53HV7 270 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 223.6 ms