RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091		A0A1B0GV90	55 aa		7.81	□□□□□ -1.16
NECAP1-223	ENST00000640091		A0A1W2PPQ1	181 aa		7.81	□□□□□ -1.16
NECAP1-223	ENST00000640091	C19orf71	A6NCJ1	209 aa		7.81	□□□□□ -1.16
NECAP1-223	ENST00000640091		P01737	135 aa		7.81	□□□□□ -1.16
NECAP1-223	ENST00000640091	TCL1A	P56279	114 aa		7.81	□□□□□ -1.16
NECAP1-223	ENST00000640091	DEFB131A	P59861	70 aa		7.81	□□□□□ -1.16
NECAP1-223	ENST00000640091	RPL19	P84098	196 aa	Known RBP	7.81	□□□□□ -1.16
NECAP1-223	ENST00000640091	SAMD13	Q5VXD3	122 aa		7.81	□□□□□ -1.16
NECAP1-223	ENST00000640091		Q6ZQT7	251 aa		7.81	□□□□□ -1.16
NECAP1-223	ENST00000640091	FAM231D	Q6ZW35	169 aa		7.81	□□□□□ -1.16
NECAP1-223	ENST00000640091	NDFIP1	Q9BT67	221 aa		7.81	□□□□□ -1.16
NECAP1-223	ENST00000640091	SIGLEC8	Q9NYZ4	499 aa		7.81	□□□□□ -1.16
NECAP1-223	ENST00000640091	NOTCH3	Q9UM47	2321 aa		7.8	□□□□□ -1.16
NECAP1-223	ENST00000640091	FBLL1	A6NHQ2	334 aa	Known RBP	7.8	□□□□□ -1.16
NECAP1-223	ENST00000640091	SPINK4	O60575	86 aa		7.8	□□□□□ -1.16
NECAP1-223	ENST00000640091	KIR3DS1	Q14943	382 aa		7.8	□□□□□ -1.16
NECAP1-223	ENST00000640091	LINC00477	Q96M19	166 aa		7.8	□□□□□ -1.16
NECAP1-223	ENST00000640091	NEU1	Q99519	415 aa		7.8	□□□□□ -1.16
NECAP1-223	ENST00000640091	IL36B	Q9NZH7	164 aa		7.8	□□□□□ -1.16
NECAP1-223	ENST00000640091	ZNF256	Q9Y2P7	627 aa	Predicted RBP	7.8	□□□□□ -1.16
NECAP1-223	ENST00000640091	IFITM10	A6NMD0	228 aa		7.79	□□□□□ -1.16
NECAP1-223	ENST00000640091	NPIPB6	E9PJ23	425 aa		7.79	□□□□□ -1.16
NECAP1-223	ENST00000640091	GZMB	P10144	247 aa		7.79	□□□□□ -1.16
NECAP1-223	ENST00000640091	RAB5A	P20339	215 aa		7.79	□□□□□ -1.16
NECAP1-223	ENST00000640091	APRG1	Q8IVJ8	170 aa		7.79	□□□□□ -1.16
NECAP1-223	ENST00000640091	OR4B1	Q8NGF8	309 aa		7.79	□□□□□ -1.16
NECAP1-223	ENST00000640091	KNCN	A6PVL3	124 aa		7.79	□□□□□ -1.16
NECAP1-223	ENST00000640091	SH2D1A	O60880	128 aa		7.79	□□□□□ -1.16
NECAP1-223	ENST00000640091	HOXA5	P20719	270 aa		7.79	□□□□□ -1.16
NECAP1-223	ENST00000640091	RAB4B	P61018	213 aa		7.79	□□□□□ -1.16
NECAP1-223	ENST00000640091	FAM162B	Q5T6X4	162 aa		7.79	□□□□□ -1.16
NECAP1-223	ENST00000640091	PRR9	Q5T870	116 aa		7.79	□□□□□ -1.16
NECAP1-223	ENST00000640091	OR2D3	Q8NGH3	330 aa		7.79	□□□□□ -1.16
NECAP1-223	ENST00000640091	SPAG8	Q99932	426 aa	Predicted RBP	7.79	□□□□□ -1.16
NECAP1-223	ENST00000640091	C2orf88	Q9BSF0	95 aa		7.79	□□□□□ -1.16
NECAP1-223	ENST00000640091	TMSB15B	A0A087X1C1	80 aa		7.78	□□□□□ -1.16
NECAP1-223	ENST00000640091		A0A0J9YX75	114 aa		7.78	□□□□□ -1.16
NECAP1-223	ENST00000640091	OR4C46	A6NHA9	309 aa		7.78	□□□□□ -1.16
NECAP1-223	ENST00000640091	IGLV1-51	P01701	117 aa		7.78	□□□□□ -1.16
NECAP1-223	ENST00000640091	ACTL10	Q5JWF8	245 aa		7.78	□□□□□ -1.16
NECAP1-223	ENST00000640091	EBLN2	Q6P2I7	272 aa		7.78	□□□□□ -1.16
NECAP1-223	ENST00000640091	KCNIP4	Q6PIL6	250 aa		7.78	□□□□□ -1.16
NECAP1-223	ENST00000640091	COX8C	Q7Z4L0	72 aa		7.78	□□□□□ -1.16
NECAP1-223	ENST00000640091	RPP21	Q9H633	154 aa	Known RBP	7.78	□□□□□ -1.16
NECAP1-223	ENST00000640091	AGRN	O00468	2067 aa		7.78	□□□□□ -1.16
NECAP1-223	ENST00000640091	TRAV25	A0A0B4J276	109 aa		7.78	□□□□□ -1.16
NECAP1-223	ENST00000640091	FRMD6-AS1	P0C7T7	363 aa		7.78	□□□□□ -1.16
NECAP1-223	ENST00000640091	C3orf56	Q8N813	242 aa		7.78	□□□□□ -1.16
NECAP1-223	ENST00000640091	FAM210B	Q96KR6	192 aa		7.78	□□□□□ -1.16
NECAP1-223	ENST00000640091	IMMP2L	Q96T52	175 aa		7.78	□□□□□ -1.16
NECAP1-223	ENST00000640091	MAP6D1	Q9H9H5	199 aa		7.78	□□□□□ -1.16
NECAP1-223	ENST00000640091	STAB1	Q9NY15	2570 aa		7.77	□□□□□ -1.16
NECAP1-223	ENST00000640091	SMIM27	A0A1W2PRY6	76 aa		7.77	□□□□□ -1.17
NECAP1-223	ENST00000640091	FABP5P3	A8MUU1	101 aa		7.77	□□□□□ -1.17
NECAP1-223	ENST00000640091	GPX1	P07203	203 aa		7.77	□□□□□ -1.17
NECAP1-223	ENST00000640091	RPS10	P46783	165 aa	Known RBP	7.77	□□□□□ -1.17
NECAP1-223	ENST00000640091	ZFAND2A	Q8N6M9	145 aa		7.77	□□□□□ -1.17
NECAP1-223	ENST00000640091	TSKU	Q8WUA8	353 aa		7.77	□□□□□ -1.17
NECAP1-223	ENST00000640091	GTSF1	Q8WW33	167 aa		7.77	□□□□□ -1.17
NECAP1-223	ENST00000640091	COL6A5	A8TX70	2615 aa		7.77	□□□□□ -1.17
NECAP1-223	ENST00000640091	TRBV24-1	A0A075B6N3	115 aa		7.76	□□□□□ -1.17
NECAP1-223	ENST00000640091	TRAV2	A0A0B4J234	112 aa		7.76	□□□□□ -1.17
NECAP1-223	ENST00000640091	HIGD1C	A8MV81	97 aa		7.76	□□□□□ -1.17
NECAP1-223	ENST00000640091	ORM1	P02763	201 aa		7.76	□□□□□ -1.17
NECAP1-223	ENST00000640091	RNASE4	P34096	147 aa	Known RBP	7.76	□□□□□ -1.17
NECAP1-223	ENST00000640091	ODF3L2	Q3SX64	289 aa		7.76	□□□□□ -1.17
NECAP1-223	ENST00000640091	CDPF1	Q6NVV7	123 aa		7.76	□□□□□ -1.17
NECAP1-223	ENST00000640091	FOXI2	Q6ZQN5	318 aa		7.76	□□□□□ -1.17
NECAP1-223	ENST00000640091	FAM19A4	Q96LR4	140 aa		7.76	□□□□□ -1.17
NECAP1-223	ENST00000640091	C11orf21	Q9P2W6	132 aa		7.76	□□□□□ -1.17
NECAP1-223	ENST00000640091		M0R2Z0	102 aa		7.76	□□□□□ -1.17
NECAP1-223	ENST00000640091	CD7	P09564	240 aa		7.76	□□□□□ -1.17
NECAP1-223	ENST00000640091	ZNF575	Q86XF7	245 aa		7.76	□□□□□ -1.17
NECAP1-223	ENST00000640091	NUP35	Q8NFH5	326 aa		7.76	□□□□□ -1.17
NECAP1-223	ENST00000640091	PYGO2	Q9BRQ0	406 aa		7.76	□□□□□ -1.17
NECAP1-223	ENST00000640091	ZNF747	Q9BV97	191 aa		7.76	□□□□□ -1.17
NECAP1-223	ENST00000640091	LENEP	Q9Y5L5	61 aa		7.76	□□□□□ -1.17
NECAP1-223	ENST00000640091	TRAV12-2	A0A075B6T6	113 aa		7.75	□□□□□ -1.17
NECAP1-223	ENST00000640091	TMEM189	A5PLL7	270 aa		7.75	□□□□□ -1.17
NECAP1-223	ENST00000640091		A8MWL6	223 aa		7.75	□□□□□ -1.17
NECAP1-223	ENST00000640091	DDT	P30046	118 aa		7.75	□□□□□ -1.17
NECAP1-223	ENST00000640091	FXYD7	P58549	80 aa		7.75	□□□□□ -1.17
NECAP1-223	ENST00000640091	ANKRD39	Q53RE8	183 aa		7.75	□□□□□ -1.17
NECAP1-223	ENST00000640091	PGLYRP4	Q96LB8	373 aa		7.75	□□□□□ -1.17
NECAP1-223	ENST00000640091	TPPP3	Q9BW30	176 aa		7.75	□□□□□ -1.17
NECAP1-223	ENST00000640091	IGKV3D-20	A0A0C4DH25	116 aa		7.75	□□□□□ -1.17
NECAP1-223	ENST00000640091	GRIFIN	A4D1Z8	144 aa		7.75	□□□□□ -1.17
NECAP1-223	ENST00000640091		H3BMM0	161 aa		7.75	□□□□□ -1.17
NECAP1-223	ENST00000640091	PKIA	P61925	76 aa		7.75	□□□□□ -1.17
NECAP1-223	ENST00000640091	SPINK13	Q1W4C9	94 aa		7.75	□□□□□ -1.17
NECAP1-223	ENST00000640091	MRPL54	Q6P161	138 aa	Known RBP	7.75	□□□□□ -1.17
NECAP1-223	ENST00000640091	C12orf54	Q6X4T0	127 aa		7.75	□□□□□ -1.17
NECAP1-223	ENST00000640091	NAT8B	Q9UHF3	227 aa		7.75	□□□□□ -1.17
NECAP1-223	ENST00000640091	MUC21	A0A0G2JKD1	596 aa		7.74	□□□□□ -1.17
NECAP1-223	ENST00000640091	MUC21	A0A140T8X8	626 aa		7.74	□□□□□ -1.17
NECAP1-223	ENST00000640091	OR11H12	B2RN74	326 aa		7.74	□□□□□ -1.17
NECAP1-223	ENST00000640091	CRISP2	P16562	243 aa		7.74	□□□□□ -1.17
NECAP1-223	ENST00000640091	CT83	Q5H943	113 aa		7.74	□□□□□ -1.17
NECAP1-223	ENST00000640091	MUC21	Q5SSG8	566 aa		7.74	□□□□□ -1.17
NECAP1-223	ENST00000640091	TMEM158	Q8WZ71	300 aa		7.74	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms