RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 HLA-DRB4P13762 266 aa7.09□□□□□ -1.27
PAX6-259ENST00000639916 ZC2HC1BQ5TFG8 222 aa7.09□□□□□ -1.27
PAX6-259ENST00000639916 LYPD2Q6UXB3 125 aa7.09□□□□□ -1.27
PAX6-259ENST00000639916 FAM19A5Q7Z5A7 132 aaPredicted RBP7.09□□□□□ -1.27
PAX6-259ENST00000639916 ARL17AQ8IVW1 177 aa7.09□□□□□ -1.27
PAX6-259ENST00000639916 ZNRD1Q9P1U0 126 aa7.09□□□□□ -1.27
PAX6-259ENST00000639916 SIGLEC9Q9Y336 463 aa7.09□□□□□ -1.27
PAX6-259ENST00000639916 HLA-DRB4X5D2U9 266 aa7.09□□□□□ -1.27
PAX6-259ENST00000639916 ANKHD1Q8IWZ3 2542 aaKnown RBP7.08□□□□□ -1.28
PAX6-259ENST00000639916 ABCA4P78363 2273 aa7.08□□□□□ -1.28
PAX6-259ENST00000639916 D6R8Y8 96 aa7.08□□□□□ -1.28
PAX6-259ENST00000639916 NDUFB3O43676 98 aa7.08□□□□□ -1.28
PAX6-259ENST00000639916 IGKCP01834 107 aa7.08□□□□□ -1.28
PAX6-259ENST00000639916 CCL3L1P16619 93 aa7.08□□□□□ -1.28
PAX6-259ENST00000639916 TMEM200BQ69YZ2 307 aa7.08□□□□□ -1.28
PAX6-259ENST00000639916 SLC25A48Q6ZT89 311 aaKnown RBP7.08□□□□□ -1.28
PAX6-259ENST00000639916 C21orf62Q9NYP8 219 aa7.08□□□□□ -1.28
PAX6-259ENST00000639916 EPDR1Q9UM22 224 aa7.08□□□□□ -1.28
PAX6-259ENST00000639916 TRAV8-2A0A0B4J237 113 aa7.08□□□□□ -1.28
PAX6-259ENST00000639916 A0A1W2PPI3 338 aa7.08□□□□□ -1.28
PAX6-259ENST00000639916 MYCNOSP40205 109 aa7.08□□□□□ -1.28
PAX6-259ENST00000639916 UBE2D3P61077 147 aa7.08□□□□□ -1.28
PAX6-259ENST00000639916 UBE2D2P62837 147 aa7.08□□□□□ -1.28
PAX6-259ENST00000639916 CDSNQ15517 529 aa7.08□□□□□ -1.28
PAX6-259ENST00000639916 MRPL23Q16540 153 aaKnown RBP7.08□□□□□ -1.28
PAX6-259ENST00000639916 TMEM30BQ3MIR4 351 aa7.08□□□□□ -1.28
PAX6-259ENST00000639916 FBXL19-AS1Q494R0 122 aa7.08□□□□□ -1.28
PAX6-259ENST00000639916 GATD1Q8NB37 220 aa7.08□□□□□ -1.28
PAX6-259ENST00000639916 ZNF714Q96N38 554 aa7.08□□□□□ -1.28
PAX6-259ENST00000639916 PAXXQ9BUH6 204 aa7.08□□□□□ -1.28
PAX6-259ENST00000639916 TPPP3Q9BW30 176 aa7.08□□□□□ -1.28
PAX6-259ENST00000639916 H3BVH4 76 aa7.07□□□□□ -1.28
PAX6-259ENST00000639916 ATP5IP56385 69 aaPredicted RBP7.07□□□□□ -1.28
PAX6-259ENST00000639916 LINC01549A6NIU2 74 aa7.07□□□□□ -1.28
PAX6-259ENST00000639916 ADORA2A-AS1P86434 159 aa7.07□□□□□ -1.28
PAX6-259ENST00000639916 RIGQ13278 110 aa7.07□□□□□ -1.28
PAX6-259ENST00000639916 CTSZQ9UBR2 303 aa7.07□□□□□ -1.28
PAX6-259ENST00000639916 MYMXA0A1B0GTQ4 84 aa7.06□□□□□ -1.28
PAX6-259ENST00000639916 TCL1BO95988 128 aa7.06□□□□□ -1.28
PAX6-259ENST00000639916 IGKV1-16P04430 117 aa7.06□□□□□ -1.28
PAX6-259ENST00000639916 OR1L4Q8NGR5 311 aa7.06□□□□□ -1.28
PAX6-259ENST00000639916 FXYD5Q96DB9 178 aa7.06□□□□□ -1.28
PAX6-259ENST00000639916 CHCHD5Q9BSY4 110 aa7.06□□□□□ -1.28
PAX6-259ENST00000639916 C15orf61A6NNL5 157 aa7.06□□□□□ -1.28
PAX6-259ENST00000639916 LYNX1G3V0Z9 82 aa7.06□□□□□ -1.28
PAX6-259ENST00000639916 LYNX1P0DP58 116 aa7.06□□□□□ -1.28
PAX6-259ENST00000639916 ODF3Q96PU9 254 aa7.06□□□□□ -1.28
PAX6-259ENST00000639916 ENY2Q9NPA8 101 aa7.06□□□□□ -1.28
PAX6-259ENST00000639916 TRAV8-1A0A0A6YYK1 113 aa7.05□□□□□ -1.28
PAX6-259ENST00000639916 C9JAW5 83 aa7.05□□□□□ -1.28
PAX6-259ENST00000639916 LY6DQ14210 128 aa7.05□□□□□ -1.28
PAX6-259ENST00000639916 Q71RC1 249 aaPredicted RBP7.05□□□□□ -1.28
PAX6-259ENST00000639916 C15orf53Q8NAA6 179 aa7.05□□□□□ -1.28
PAX6-259ENST00000639916 ONECUT1Q9UBC0 465 aa7.05□□□□□ -1.28
PAX6-259ENST00000639916 KAAG1Q9UBP8 84 aa7.05□□□□□ -1.28
PAX6-259ENST00000639916 HIGD1AQ9Y241 93 aa7.05□□□□□ -1.28
PAX6-259ENST00000639916 U3KQK5 164 aa7.05□□□□□ -1.28
PAX6-259ENST00000639916 TMEM213A2RRL7 107 aa7.05□□□□□ -1.28
PAX6-259ENST00000639916 PGPA6NDG6 321 aa7.05□□□□□ -1.28
PAX6-259ENST00000639916 DPM2O94777 84 aa7.05□□□□□ -1.28
PAX6-259ENST00000639916 PRSS1P07477 247 aa7.05□□□□□ -1.28
PAX6-259ENST00000639916 LOXP28300 417 aaPredicted RBP7.05□□□□□ -1.28
PAX6-259ENST00000639916 HSPE1P61604 102 aaKnown RBP7.05□□□□□ -1.28
PAX6-259ENST00000639916 MLANAQ16655 118 aa7.05□□□□□ -1.28
PAX6-259ENST00000639916 ZNF672Q499Z4 452 aaPredicted RBP7.05□□□□□ -1.28
PAX6-259ENST00000639916 ZNF493Q6ZR52 646 aa7.05□□□□□ -1.28
PAX6-259ENST00000639916 LRRC75A-AS1Q8N1F1 130 aa7.05□□□□□ -1.28
PAX6-259ENST00000639916 FMC1Q96HJ9 113 aa7.05□□□□□ -1.28
PAX6-259ENST00000639916 TMEM14BQ9NUH8 114 aa7.05□□□□□ -1.28
PAX6-259ENST00000639916 TNCP24821 2201 aa7.04□□□□□ -1.28
PAX6-259ENST00000639916 J3KT08 172 aa7.04□□□□□ -1.28
PAX6-259ENST00000639916 NPFFO15130 113 aa7.04□□□□□ -1.28
PAX6-259ENST00000639916 POU2AF1Q16633 256 aa7.04□□□□□ -1.28
PAX6-259ENST00000639916 ZNF833PQ6ZTB9 187 aa7.04□□□□□ -1.28
PAX6-259ENST00000639916 ORMDL3Q8N138 153 aa7.04□□□□□ -1.28
PAX6-259ENST00000639916 BAALCQ8WXS3 180 aa7.04□□□□□ -1.28
PAX6-259ENST00000639916 TMEM101Q96IK0 257 aa7.04□□□□□ -1.28
PAX6-259ENST00000639916 TRGV9Q99603 122 aa7.04□□□□□ -1.28
PAX6-259ENST00000639916 MRPL20Q9BYC9 149 aaKnown RBP7.04□□□□□ -1.28
PAX6-259ENST00000639916 FOXA2Q9Y261 457 aaPredicted RBP7.04□□□□□ -1.28
PAX6-259ENST00000639916 LRBAP50851 2863 aa7.04□□□□□ -1.28
PAX6-259ENST00000639916 OOSP1A8MZH6 123 aa7.04□□□□□ -1.28
PAX6-259ENST00000639916 LINC01619G3V211 115 aa7.04□□□□□ -1.28
PAX6-259ENST00000639916 SCGB1C2P0DMR2 95 aa7.04□□□□□ -1.28
PAX6-259ENST00000639916 MFAP4P55083 255 aa7.04□□□□□ -1.28
PAX6-259ENST00000639916 PDPNQ86YL7 162 aa7.04□□□□□ -1.28
PAX6-259ENST00000639916 FOXC2Q99958 501 aa7.04□□□□□ -1.28
PAX6-259ENST00000639916 TMEM160Q9NX00 188 aa7.04□□□□□ -1.28
PAX6-259ENST00000639916 SPTBN1Q01082 2364 aaKnown RBP7.04□□□□□ -1.28
PAX6-259ENST00000639916 TRAV40A0A0B4J280 105 aa7.03□□□□□ -1.28
PAX6-259ENST00000639916 DUSP14O95147 198 aaKnown RBP7.03□□□□□ -1.28
PAX6-259ENST00000639916 TWIST1Q15672 202 aa7.03□□□□□ -1.28
PAX6-259ENST00000639916 LYRM7Q5U5X0 104 aa7.03□□□□□ -1.28
PAX6-259ENST00000639916 AMN1Q8IY45 258 aa7.03□□□□□ -1.28
PAX6-259ENST00000639916 SRSF12Q8WXF0 261 aaKnown RBP7.03□□□□□ -1.28
PAX6-259ENST00000639916 PRNDQ9UKY0 176 aa7.03□□□□□ -1.28
PAX6-259ENST00000639916 MALRD1Q5VYJ5 2156 aa7.03□□□□□ -1.28
PAX6-259ENST00000639916 UPK2O00526 184 aa7.03□□□□□ -1.28
PAX6-259ENST00000639916 COX7A2P2O60397 106 aa7.03□□□□□ -1.28
PAX6-259ENST00000639916 NPYP01303 97 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms