RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 AGPAT4-IT1Q9H0P7 198 aa8.41□□□□□ -1.06
SNIP1-204ENST00000638725 ZFAND3Q9H8U3 227 aa8.41□□□□□ -1.06
SNIP1-204ENST00000638725 WNK2Q9Y3S1 2297 aa8.41□□□□□ -1.06
SNIP1-204ENST00000638725 RPL24P83731 157 aaKnown RBP8.4□□□□□ -1.06
SNIP1-204ENST00000638725 ECSCRQ19T08 205 aa8.4□□□□□ -1.06
SNIP1-204ENST00000638725 CEND1Q8N111 149 aa8.4□□□□□ -1.06
SNIP1-204ENST00000638725 MAPKAPK5-AS1Q8N8E1 139 aa8.4□□□□□ -1.06
SNIP1-204ENST00000638725 TIMD4Q96H15 378 aa8.4□□□□□ -1.06
SNIP1-204ENST00000638725 VKORC1Q9BQB6 163 aa8.4□□□□□ -1.06
SNIP1-204ENST00000638725 UFC1Q9Y3C8 167 aa8.4□□□□□ -1.06
SNIP1-204ENST00000638725 IGHV3-49A0A0A0MS15 119 aa8.4□□□□□ -1.06
SNIP1-204ENST00000638725 CLEC3BP05452 202 aa8.4□□□□□ -1.06
SNIP1-204ENST00000638725 PSMG4Q5JS54 123 aa8.4□□□□□ -1.06
SNIP1-204ENST00000638725 CCDC144NLQ6NUI1 221 aa8.4□□□□□ -1.06
SNIP1-204ENST00000638725 Q8N9W7 124 aa8.4□□□□□ -1.06
SNIP1-204ENST00000638725 ZNF502Q8TBZ5 544 aa8.4□□□□□ -1.06
SNIP1-204ENST00000638725 SMPXQ9UHP9 88 aa8.4□□□□□ -1.06
SNIP1-204ENST00000638725 IGHV7-4-1A0A0J9YVY3 117 aa8.39□□□□□ -1.07
SNIP1-204ENST00000638725 TEX48A0A1B0GUV7 120 aa8.39□□□□□ -1.07
SNIP1-204ENST00000638725 NRACQ8N912 160 aa8.39□□□□□ -1.07
SNIP1-204ENST00000638725 EFNA4P52798 201 aa8.39□□□□□ -1.07
SNIP1-204ENST00000638725 TM2D2Q9BX73 214 aa8.39□□□□□ -1.07
SNIP1-204ENST00000638725 CLPSL1A2RUU4 121 aa8.39□□□□□ -1.07
SNIP1-204ENST00000638725 RBAKDNA6NC62 111 aa8.39□□□□□ -1.07
SNIP1-204ENST00000638725 ZNF207O43670 478 aaKnown RBP8.39□□□□□ -1.07
SNIP1-204ENST00000638725 EBI3Q14213 229 aa8.39□□□□□ -1.07
SNIP1-204ENST00000638725 LAGE3Q14657 143 aa8.39□□□□□ -1.07
SNIP1-204ENST00000638725 MYOZ3Q8TDC0 251 aa8.39□□□□□ -1.07
SNIP1-204ENST00000638725 SLC50A1Q9BRV3 221 aa8.39□□□□□ -1.07
SNIP1-204ENST00000638725 MSRB2Q9Y3D2 182 aa8.39□□□□□ -1.07
SNIP1-204ENST00000638725 RIF1Q5UIP0 2472 aaKnown RBP8.38□□□□□ -1.07
SNIP1-204ENST00000638725 TRAV8-2A0A0B4J237 113 aa8.38□□□□□ -1.07
SNIP1-204ENST00000638725 CLEC19AQ6UXS0 136 aa8.38□□□□□ -1.07
SNIP1-204ENST00000638725 FAM110DQ8TAY7 271 aaPredicted RBP8.38□□□□□ -1.07
SNIP1-204ENST00000638725 SPOCK3Q9BQ16 436 aa8.38□□□□□ -1.07
SNIP1-204ENST00000638725 RELNP78509 3460 aa8.38□□□□□ -1.07
SNIP1-204ENST00000638725 ATP6V0E1O15342 81 aa8.38□□□□□ -1.07
SNIP1-204ENST00000638725 TMEM78Q5T7P6 136 aa8.38□□□□□ -1.07
SNIP1-204ENST00000638725 CCDC140Q96MF4 163 aa8.38□□□□□ -1.07
SNIP1-204ENST00000638725 ANKHD1Q8IWZ3 2542 aaKnown RBP8.37□□□□□ -1.07
SNIP1-204ENST00000638725 GOSR1O95249 250 aa8.37□□□□□ -1.07
SNIP1-204ENST00000638725 CDSNQ15517 529 aa8.37□□□□□ -1.07
SNIP1-204ENST00000638725 SPANXN1Q5VSR9 72 aa8.37□□□□□ -1.07
SNIP1-204ENST00000638725 SPTBN2O15020 2390 aa8.37□□□□□ -1.07
SNIP1-204ENST00000638725 A0A087WX48 190 aa8.37□□□□□ -1.07
SNIP1-204ENST00000638725 IGLL5B9A064 214 aa8.37□□□□□ -1.07
SNIP1-204ENST00000638725 HLA-DRB4P13762 266 aa8.37□□□□□ -1.07
SNIP1-204ENST00000638725 ZFP36P26651 326 aaKnown RBP8.37□□□□□ -1.07
SNIP1-204ENST00000638725 RAB9AP51151 201 aa8.37□□□□□ -1.07
SNIP1-204ENST00000638725 HLA-DRB4X5D2U9 266 aa8.37□□□□□ -1.07
SNIP1-204ENST00000638725 OOSP1A8MZH6 123 aa8.36□□□□□ -1.07
SNIP1-204ENST00000638725 E9PLD3 99 aa8.36□□□□□ -1.07
SNIP1-204ENST00000638725 G3V318 75 aa8.36□□□□□ -1.07
SNIP1-204ENST00000638725 H3BVH4 76 aa8.36□□□□□ -1.07
SNIP1-204ENST00000638725 MED13LQ71F56 2210 aa8.36□□□□□ -1.07
SNIP1-204ENST00000638725 ZNF292O60281 2723 aa8.36□□□□□ -1.07
SNIP1-204ENST00000638725 PRSS47A8MTI9 375 aa8.36□□□□□ -1.07
SNIP1-204ENST00000638725 SPRY2O43597 315 aa8.36□□□□□ -1.07
SNIP1-204ENST00000638725 MINOS1Q5TGZ0 78 aa8.36□□□□□ -1.07
SNIP1-204ENST00000638725 C8orf86Q6ZUL3 223 aa8.36□□□□□ -1.07
SNIP1-204ENST00000638725 ZNF479Q96JC4 524 aa8.36□□□□□ -1.07
SNIP1-204ENST00000638725 MINOS1-NBL1R4GNA1 71 aa8.36□□□□□ -1.07
SNIP1-204ENST00000638725 AGRNO00468 2067 aa8.36□□□□□ -1.07
SNIP1-204ENST00000638725 LINC01548A6NM66 108 aa8.35□□□□□ -1.07
SNIP1-204ENST00000638725 J3KRW8 73 aa8.35□□□□□ -1.07
SNIP1-204ENST00000638725 SRSF1Q07955 248 aaKnown RBP eCLIP8.35□□□□□ -1.07
SNIP1-204ENST00000638725 WFDC2Q14508 124 aa8.35□□□□□ -1.07
SNIP1-204ENST00000638725 C12orf74Q32Q52 190 aa8.35□□□□□ -1.07
SNIP1-204ENST00000638725 PRR9Q5T870 116 aa8.35□□□□□ -1.07
SNIP1-204ENST00000638725 KLK15Q9H2R5 256 aa8.35□□□□□ -1.07
SNIP1-204ENST00000638725 CACNA1BQ00975 2339 aa8.35□□□□□ -1.07
SNIP1-204ENST00000638725 SVEP1Q4LDE5 3571 aa8.35□□□□□ -1.07
SNIP1-204ENST00000638725 HIST1H4GQ99525 98 aa8.35□□□□□ -1.07
SNIP1-204ENST00000638725 FOXI2Q6ZQN5 318 aa8.34□□□□□ -1.07
SNIP1-204ENST00000638725 H3BMG7 143 aa8.34□□□□□ -1.07
SNIP1-204ENST00000638725 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.34□□□□□ -1.07
SNIP1-204ENST00000638725 IGF1P05019 195 aa8.34□□□□□ -1.07
SNIP1-204ENST00000638725 FBXL19-AS1Q494R0 122 aa8.34□□□□□ -1.07
SNIP1-204ENST00000638725 C11orf71Q6IPW1 123 aa8.34□□□□□ -1.07
SNIP1-204ENST00000638725 AMTNQ6UX39 209 aa8.34□□□□□ -1.07
SNIP1-204ENST00000638725 C9orf47Q6ZRZ4 202 aa8.34□□□□□ -1.07
SNIP1-204ENST00000638725 C1orf122Q6ZSJ8 110 aa8.34□□□□□ -1.07
SNIP1-204ENST00000638725 MTURNQ8N3F0 131 aa8.34□□□□□ -1.07
SNIP1-204ENST00000638725 METTL26Q96S19 204 aa8.34□□□□□ -1.07
SNIP1-204ENST00000638725 SMIM2Q9BVW6 85 aa8.34□□□□□ -1.07
SNIP1-204ENST00000638725 SIRPDQ9H106 197 aa8.34□□□□□ -1.07
SNIP1-204ENST00000638725 IGHV4-4A0A075B6R2 117 aa8.33□□□□□ -1.08
SNIP1-204ENST00000638725 CCL21O00585 134 aa8.33□□□□□ -1.08
SNIP1-204ENST00000638725 PLNP26678 52 aa8.33□□□□□ -1.08
SNIP1-204ENST00000638725 TAL2Q16559 108 aa8.33□□□□□ -1.08
SNIP1-204ENST00000638725 CHTOPQ9Y3Y2 248 aaKnown RBP8.33□□□□□ -1.08
SNIP1-204ENST00000638725 F8VRH5 84 aa8.33□□□□□ -1.08
SNIP1-204ENST00000638725 CIDEAO60543 219 aa8.33□□□□□ -1.08
SNIP1-204ENST00000638725 SPANXB1Q9NS25 103 aaPredicted RBP8.33□□□□□ -1.08
SNIP1-204ENST00000638725 ZFHX2Q9C0A1 2572 aaPredicted RBP8.33□□□□□ -1.08
SNIP1-204ENST00000638725 TRBV7-3A0A075B6L6 115 aa8.33□□□□□ -1.08
SNIP1-204ENST00000638725 H7C1H1 209 aa8.33□□□□□ -1.08
SNIP1-204ENST00000638725 SAMD13Q5VXD3 122 aa8.33□□□□□ -1.08
SNIP1-204ENST00000638725 SH2D6Q7Z4S9 175 aa8.33□□□□□ -1.08
SNIP1-204ENST00000638725 MRPL53Q96EL3 112 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms