RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 TP53TG3Q9ULZ0 132 aa15.44■□□□□ 0.06
SCN1B-206ENST00000638536 APLNQ9ULZ1 77 aa15.44■□□□□ 0.06
SCN1B-206ENST00000638536 TRBV7-9A0A0J9YWB2 115 aa15.43■□□□□ 0.06
SCN1B-206ENST00000638536 DAD1P61803 113 aa15.43■□□□□ 0.06
SCN1B-206ENST00000638536 ZNF493Q6ZR52 646 aa15.43■□□□□ 0.06
SCN1B-206ENST00000638536 EPDR1Q9UM22 224 aa15.43■□□□□ 0.06
SCN1B-206ENST00000638536 TEX48A0A1B0GUV7 120 aa15.43■□□□□ 0.06
SCN1B-206ENST00000638536 A0A1W2PRE2 83 aa15.43■□□□□ 0.06
SCN1B-206ENST00000638536 LYRM9A8MSI8 78 aa15.43■□□□□ 0.06
SCN1B-206ENST00000638536 CCDC28AQ8IWP9 274 aa15.43■□□□□ 0.06
SCN1B-206ENST00000638536 STOML3Q8TAV4 291 aa15.43■□□□□ 0.06
SCN1B-206ENST00000638536 FAM213BQ8TBF2 198 aa15.43■□□□□ 0.06
SCN1B-206ENST00000638536 TIMM8BQ9Y5J9 83 aaPredicted RBP15.43■□□□□ 0.06
SCN1B-206ENST00000638536 IGHV4-4A0A075B6R2 117 aa15.42■□□□□ 0.06
SCN1B-206ENST00000638536 FAM74A7A6NL05 159 aa15.42■□□□□ 0.06
SCN1B-206ENST00000638536 IGLV2-11P01706 119 aa15.42■□□□□ 0.06
SCN1B-206ENST00000638536 TPT1P13693 172 aaKnown RBP15.42■□□□□ 0.06
SCN1B-206ENST00000638536 HTN3P15516 51 aa15.42■□□□□ 0.06
SCN1B-206ENST00000638536 A0A1B0GV50 99 aa15.41■□□□□ 0.06
SCN1B-206ENST00000638536 C11orf72Q8NBR9 251 aa15.41■□□□□ 0.06
SCN1B-206ENST00000638536 LINC00479Q96M42 142 aa15.41■□□□□ 0.06
SCN1B-206ENST00000638536 LENEPQ9Y5L5 61 aa15.41■□□□□ 0.06
SCN1B-206ENST00000638536 F6UZH7 168 aa15.4■□□□□ 0.06
SCN1B-206ENST00000638536 LY6G6CO95867 125 aa15.4■□□□□ 0.06
SCN1B-206ENST00000638536 MUC21Q5SSG8 566 aa15.4■□□□□ 0.06
SCN1B-206ENST00000638536 LINC00467Q9BRT7 94 aa15.4■□□□□ 0.06
SCN1B-206ENST00000638536 GSN-AS1Q9NRJ2 163 aa15.4■□□□□ 0.06
SCN1B-206ENST00000638536 DNAH6Q9C0G6 4158 aa15.4■□□□□ 0.06
SCN1B-206ENST00000638536 CBY3A6NI87 242 aa15.39■□□□□ 0.05
SCN1B-206ENST00000638536 UMAD1C9J7I0 102 aa15.39■□□□□ 0.05
SCN1B-206ENST00000638536 Q6AWC8 147 aa15.39■□□□□ 0.05
SCN1B-206ENST00000638536 EIF4E3Q8N5X7 224 aaKnown RBP15.39■□□□□ 0.05
SCN1B-206ENST00000638536 SFT2D1Q8WV19 159 aa15.39■□□□□ 0.05
SCN1B-206ENST00000638536 MBD3L1Q8WWY6 194 aa15.39■□□□□ 0.05
SCN1B-206ENST00000638536 IGHV1OR15-1A0A075B7D0 117 aa15.39■□□□□ 0.05
SCN1B-206ENST00000638536 RGS13O14921 159 aa15.39■□□□□ 0.05
SCN1B-206ENST00000638536 EIF5AP63241 154 aaKnown RBP15.39■□□□□ 0.05
SCN1B-206ENST00000638536 C9orf62Q8N4C0 152 aa15.39■□□□□ 0.05
SCN1B-206ENST00000638536 C8orf49Q96NF6 230 aa15.39■□□□□ 0.05
SCN1B-206ENST00000638536 TREM1Q9NP99 234 aa15.39■□□□□ 0.05
SCN1B-206ENST00000638536 TRAV34A0A0B4J273 112 aa15.38■□□□□ 0.05
SCN1B-206ENST00000638536 ANXA2RQ3ZCQ2 193 aa15.38■□□□□ 0.05
SCN1B-206ENST00000638536 PSG8Q9UQ74 426 aa15.38■□□□□ 0.05
SCN1B-206ENST00000638536 KLF12Q9Y4X4 402 aa15.38■□□□□ 0.05
SCN1B-206ENST00000638536 CYB561D1Q8N8Q1 229 aa15.37■□□□□ 0.05
SCN1B-206ENST00000638536 ATG101Q9BSB4 218 aa15.37■□□□□ 0.05
SCN1B-206ENST00000638536 MUC4Q99102 2169 aa15.37■□□□□ 0.05
SCN1B-206ENST00000638536 SERTM2A0A1B0GWG4 89 aa15.36■□□□□ 0.05
SCN1B-206ENST00000638536 SNURFLB1AK76 121 aa15.36■□□□□ 0.05
SCN1B-206ENST00000638536 ZNF80P51504 273 aaPredicted RBP15.36■□□□□ 0.05
SCN1B-206ENST00000638536 Q6ZTI0 123 aa15.36■□□□□ 0.05
SCN1B-206ENST00000638536 PRNTQ86SH4 94 aa15.36■□□□□ 0.05
SCN1B-206ENST00000638536 LINC00612Q8N6U2 182 aa15.36■□□□□ 0.05
SCN1B-206ENST00000638536 GAGE12BA1L429 117 aa15.35■□□□□ 0.05
SCN1B-206ENST00000638536 GAGE7O76087 117 aa15.35■□□□□ 0.05
SCN1B-206ENST00000638536 IFNA7P01567 189 aa15.35■□□□□ 0.05
SCN1B-206ENST00000638536 GAGE12FP0CL80 117 aa15.35■□□□□ 0.05
SCN1B-206ENST00000638536 GAGE12GP0CL81 117 aa15.35■□□□□ 0.05
SCN1B-206ENST00000638536 GAGE12IP0CL82 117 aa15.35■□□□□ 0.05
SCN1B-206ENST00000638536 ATP5G3P48201 142 aa15.35■□□□□ 0.05
SCN1B-206ENST00000638536 FLI1Q01543 452 aaPredicted RBP15.35■□□□□ 0.05
SCN1B-206ENST00000638536 DAZ2Q13117 558 aaKnown RBP15.35■□□□□ 0.05
SCN1B-206ENST00000638536 DPPA3Q6W0C5 159 aa15.35■□□□□ 0.05
SCN1B-206ENST00000638536 TMEM75Q8N9X5 138 aa15.35■□□□□ 0.05
SCN1B-206ENST00000638536 MDFICQ9P1T7 246 aa15.35■□□□□ 0.05
SCN1B-206ENST00000638536 PEX7O00628 323 aa15.34■□□□□ 0.05
SCN1B-206ENST00000638536 PAGE4O60829 102 aa15.34■□□□□ 0.05
SCN1B-206ENST00000638536 H2AFB1P0C5Y9 115 aa15.34■□□□□ 0.05
SCN1B-206ENST00000638536 TCTAP57738 103 aa15.34■□□□□ 0.05
SCN1B-206ENST00000638536 ZNF680Q8NEM1 530 aa15.34■□□□□ 0.05
SCN1B-206ENST00000638536 K7EQM0 130 aa15.33■□□□□ 0.04
SCN1B-206ENST00000638536 NKX2-5P52952 324 aaPredicted RBP15.33■□□□□ 0.04
SCN1B-206ENST00000638536 TCL1AP56279 114 aa15.33■□□□□ 0.04
SCN1B-206ENST00000638536 CCL20P78556 96 aa15.33■□□□□ 0.04
SCN1B-206ENST00000638536 ZFP69Q49AA0 526 aa15.33■□□□□ 0.04
SCN1B-206ENST00000638536 CST9LP1Q5W188 147 aa15.33■□□□□ 0.04
SCN1B-206ENST00000638536 LGALS9CQ6DKI2 356 aa15.33■□□□□ 0.04
SCN1B-206ENST00000638536 TMEM88Q6PEY1 159 aa15.33■□□□□ 0.04
SCN1B-206ENST00000638536 SLC51BQ86UW2 128 aa15.33■□□□□ 0.04
SCN1B-206ENST00000638536 C11orf21Q9P2W6 132 aa15.33■□□□□ 0.04
SCN1B-206ENST00000638536 NAGKQ9UJ70 344 aa15.33■□□□□ 0.04
SCN1B-206ENST00000638536 NACAE9PAV3 2078 aa15.33■□□□□ 0.04
SCN1B-206ENST00000638536 NDUFAF3Q9BU61 184 aa15.32■□□□□ 0.04
SCN1B-206ENST00000638536 F5H768 121 aa15.32■□□□□ 0.04
SCN1B-206ENST00000638536 GNRH2O43555 120 aa15.32■□□□□ 0.04
SCN1B-206ENST00000638536 ATP5G1P05496 136 aa15.32■□□□□ 0.04
SCN1B-206ENST00000638536 IBA57Q5T440 356 aaKnown RBP15.32■□□□□ 0.04
SCN1B-206ENST00000638536 NKX6-2Q9C056 277 aaPredicted RBP15.32■□□□□ 0.04
SCN1B-206ENST00000638536 FRAS1Q86XX4 4008 aa15.31■□□□□ 0.04
SCN1B-206ENST00000638536 SULT1A2P50226 295 aa15.31■□□□□ 0.04
SCN1B-206ENST00000638536 TMEM183BQ1AE95 376 aa15.31■□□□□ 0.04
SCN1B-206ENST00000638536 TMEM183AQ8IXX5 376 aa15.31■□□□□ 0.04
SCN1B-206ENST00000638536 NDFIP1Q9BT67 221 aa15.31■□□□□ 0.04
SCN1B-206ENST00000638536 ARL2-SNX15V9GYD0 113 aa15.31■□□□□ 0.04
SCN1B-206ENST00000638536 TRGV1A0A0A0MS02 117 aa15.3■□□□□ 0.04
SCN1B-206ENST00000638536 TRAV21A0A0B4J279 112 aa15.3■□□□□ 0.04
SCN1B-206ENST00000638536 SPINK4O60575 86 aa15.3■□□□□ 0.04
SCN1B-206ENST00000638536 GCGP01275 180 aa15.3■□□□□ 0.04
SCN1B-206ENST00000638536 FAM159AQ6UWV7 190 aa15.3■□□□□ 0.04
SCN1B-206ENST00000638536 HIST1H2BAQ96A08 127 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms