RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 FAM210AQ96ND0 272 aa16.23■□□□□ 0.19
CHRNA7-231ENST00000637786 TREM1Q9NP99 234 aa16.23■□□□□ 0.19
CHRNA7-231ENST00000637786 TRAV34A0A0B4J273 112 aa16.22■□□□□ 0.19
CHRNA7-231ENST00000637786 SMIM9A6NGZ8 99 aa16.22■□□□□ 0.19
CHRNA7-231ENST00000637786 RBMY1A1P0DJD3 496 aaKnown RBP16.22■□□□□ 0.19
CHRNA7-231ENST00000637786 RBMY1CP0DJD4 496 aa16.22■□□□□ 0.19
CHRNA7-231ENST00000637786 RBMY1FQ15415 496 aaKnown RBP16.22■□□□□ 0.19
CHRNA7-231ENST00000637786 Q86TA4 180 aa16.22■□□□□ 0.19
CHRNA7-231ENST00000637786 TMEM208Q9BTX3 173 aa16.22■□□□□ 0.19
CHRNA7-231ENST00000637786 ZFP30Q9Y2G7 519 aa16.22■□□□□ 0.19
CHRNA7-231ENST00000637786 X6R8D5 127 aa16.22■□□□□ 0.19
CHRNA7-231ENST00000637786 STAB2Q8WWQ8 2551 aa16.21■□□□□ 0.19
CHRNA7-231ENST00000637786 H7BYZ3 331 aa16.21■□□□□ 0.19
CHRNA7-231ENST00000637786 J3KRW8 73 aa16.21■□□□□ 0.19
CHRNA7-231ENST00000637786 MIFP14174 115 aa16.21■□□□□ 0.19
CHRNA7-231ENST00000637786 RNASE4P34096 147 aaKnown RBP16.21■□□□□ 0.19
CHRNA7-231ENST00000637786 PRR9Q5T870 116 aa16.21■□□□□ 0.19
CHRNA7-231ENST00000637786 NIPSNAP3BQ9BS92 247 aa16.21■□□□□ 0.19
CHRNA7-231ENST00000637786 ZNF324O75467 553 aaPredicted RBP16.2■□□□□ 0.18
CHRNA7-231ENST00000637786 BTN1A1Q13410 526 aa16.2■□□□□ 0.18
CHRNA7-231ENST00000637786 Q6AWC8 147 aa16.2■□□□□ 0.18
CHRNA7-231ENST00000637786 IGHV3OR16-12A0A075B7B8 117 aa16.19■□□□□ 0.18
CHRNA7-231ENST00000637786 TRAV12-3A0A0B4J271 114 aa16.19■□□□□ 0.18
CHRNA7-231ENST00000637786 TMEM250H0YL14 139 aa16.19■□□□□ 0.18
CHRNA7-231ENST00000637786 LTAP01374 205 aa16.19■□□□□ 0.18
CHRNA7-231ENST00000637786 TOR2AQ5JU69 321 aa16.19■□□□□ 0.18
CHRNA7-231ENST00000637786 COX8CQ7Z4L0 72 aa16.19■□□□□ 0.18
CHRNA7-231ENST00000637786 LINC01587Q99440 93 aa16.19■□□□□ 0.18
CHRNA7-231ENST00000637786 EIF5A2Q9GZV4 153 aaKnown RBP16.19■□□□□ 0.18
CHRNA7-231ENST00000637786 TAS2R60P59551 318 aa16.18■□□□□ 0.18
CHRNA7-231ENST00000637786 SMUG1Q53HV7 270 aa16.18■□□□□ 0.18
CHRNA7-231ENST00000637786 CLLU1Q5K131 121 aa16.18■□□□□ 0.18
CHRNA7-231ENST00000637786 PYGO2Q9BRQ0 406 aa16.18■□□□□ 0.18
CHRNA7-231ENST00000637786 LINC00467Q9BRT7 94 aa16.18■□□□□ 0.18
CHRNA7-231ENST00000637786 RPL35P42766 123 aaKnown RBP16.17■□□□□ 0.18
CHRNA7-231ENST00000637786 Q8NAQ8 132 aa16.17■□□□□ 0.18
CHRNA7-231ENST00000637786 C8orf49Q96NF6 230 aa16.17■□□□□ 0.18
CHRNA7-231ENST00000637786 C11orf68Q9H3H3 251 aaKnown RBP16.17■□□□□ 0.18
CHRNA7-231ENST00000637786 MED9Q9NWA0 146 aa16.17■□□□□ 0.18
CHRNA7-231ENST00000637786 RRN3P1Q2M238 152 aa16.16■□□□□ 0.18
CHRNA7-231ENST00000637786 TRAV21A0A0B4J279 112 aa16.15■□□□□ 0.18
CHRNA7-231ENST00000637786 TMEM183AQ8IXX5 376 aa16.15■□□□□ 0.18
CHRNA7-231ENST00000637786 DERL1Q9BUN8 251 aa16.15■□□□□ 0.18
CHRNA7-231ENST00000637786 SMDT1Q9H4I9 107 aa16.15■□□□□ 0.18
CHRNA7-231ENST00000637786 IGHV4-28A0A0C4DH34 117 aa16.14■□□□□ 0.17
CHRNA7-231ENST00000637786 TMEM189A5PLL7 270 aa16.14■□□□□ 0.17
CHRNA7-231ENST00000637786 RGS13O14921 159 aa16.14■□□□□ 0.17
CHRNA7-231ENST00000637786 GCGP01275 180 aa16.14■□□□□ 0.17
CHRNA7-231ENST00000637786 ZNF705GA8MUZ8 300 aaPredicted RBP16.13■□□□□ 0.17
CHRNA7-231ENST00000637786 PFN1P07737 140 aaKnown RBP16.13■□□□□ 0.17
CHRNA7-231ENST00000637786 ZNF493Q6ZR52 646 aa16.13■□□□□ 0.17
CHRNA7-231ENST00000637786 BAGE2Q86Y30 109 aa16.13■□□□□ 0.17
CHRNA7-231ENST00000637786 SMIM12Q96EX1 92 aa16.13■□□□□ 0.17
CHRNA7-231ENST00000637786 MLST8Q9BVC4 326 aa16.13■□□□□ 0.17
CHRNA7-231ENST00000637786 ZNF80P51504 273 aaPredicted RBP16.12■□□□□ 0.17
CHRNA7-231ENST00000637786 PEA15Q15121 130 aa16.12■□□□□ 0.17
CHRNA7-231ENST00000637786 EDA2RQ9HAV5 297 aa16.12■□□□□ 0.17
CHRNA7-231ENST00000637786 IGHV1OR15-1A0A075B7D0 117 aa16.11■□□□□ 0.17
CHRNA7-231ENST00000637786 A0A0J9YWU9 116 aa16.11■□□□□ 0.17
CHRNA7-231ENST00000637786 SRP19P09132 144 aaKnown RBP16.11■□□□□ 0.17
CHRNA7-231ENST00000637786 TDRG1Q3Y452 100 aa16.11■□□□□ 0.17
CHRNA7-231ENST00000637786 ANXA2RQ3ZCQ2 193 aa16.11■□□□□ 0.17
CHRNA7-231ENST00000637786 CENPWQ5EE01 88 aa16.11■□□□□ 0.17
CHRNA7-231ENST00000637786 Q6ZQT7 251 aa16.11■□□□□ 0.17
CHRNA7-231ENST00000637786 EIF4E3Q8N5X7 224 aaKnown RBP16.11■□□□□ 0.17
CHRNA7-231ENST00000637786 TMEM263Q8WUH6 116 aaKnown RBP16.11■□□□□ 0.17
CHRNA7-231ENST00000637786 C16orf74Q96GX8 76 aa16.11■□□□□ 0.17
CHRNA7-231ENST00000637786 ZC2HC1AQ96GY0 325 aa16.11■□□□□ 0.17
CHRNA7-231ENST00000637786 FABP5P3A8MUU1 101 aa16.1■□□□□ 0.17
CHRNA7-231ENST00000637786 HTN1P15515 57 aa16.1■□□□□ 0.17
CHRNA7-231ENST00000637786 GNG4P50150 75 aa16.1■□□□□ 0.17
CHRNA7-231ENST00000637786 PARLQ9H300 379 aa16.1■□□□□ 0.17
CHRNA7-231ENST00000637786 C9JCJ5 164 aa16.09■□□□□ 0.17
CHRNA7-231ENST00000637786 AZU1P20160 251 aa16.09■□□□□ 0.17
CHRNA7-231ENST00000637786 FAM159AQ6UWV7 190 aa16.09■□□□□ 0.17
CHRNA7-231ENST00000637786 RNASE8Q8TDE3 154 aaKnown RBP16.09■□□□□ 0.17
CHRNA7-231ENST00000637786 TRBV20OR9-2A0A075B6H5 130 aa16.08■□□□□ 0.16
CHRNA7-231ENST00000637786 RAB19A4D1S5 217 aa16.08■□□□□ 0.16
CHRNA7-231ENST00000637786 PRM2P04554 102 aa16.08■□□□□ 0.16
CHRNA7-231ENST00000637786 ZNF674Q2M3X9 581 aa16.08■□□□□ 0.16
CHRNA7-231ENST00000637786 FAM162BQ5T6X4 162 aa16.08■□□□□ 0.16
CHRNA7-231ENST00000637786 NHLRC2Q8NBF2 726 aa16.08■□□□□ 0.16
CHRNA7-231ENST00000637786 KCNS1Q96KK3 526 aa16.08■□□□□ 0.16
CHRNA7-231ENST00000637786 CBY3A6NI87 242 aa16.07■□□□□ 0.16
CHRNA7-231ENST00000637786 DEFB4AO15263 64 aa16.07■□□□□ 0.16
CHRNA7-231ENST00000637786 IGLV2-8P01709 118 aa16.07■□□□□ 0.16
CHRNA7-231ENST00000637786 CRIP1P50238 77 aa16.07■□□□□ 0.16
CHRNA7-231ENST00000637786 MUC21Q5SSG8 566 aa16.07■□□□□ 0.16
CHRNA7-231ENST00000637786 PLAC8L1A1L4L8 177 aa16.06■□□□□ 0.16
CHRNA7-231ENST00000637786 SRSF3P84103 164 aaKnown RBP16.06■□□□□ 0.16
CHRNA7-231ENST00000637786 IBA57Q5T440 356 aaKnown RBP16.06■□□□□ 0.16
CHRNA7-231ENST00000637786 TRGV11A0A075B6L2 103 aa16.05■□□□□ 0.16
CHRNA7-231ENST00000637786 SDF2L1Q9HCN8 221 aa16.05■□□□□ 0.16
CHRNA7-231ENST00000637786 BIN3Q9NQY0 253 aa16.05■□□□□ 0.16
CHRNA7-231ENST00000637786 C11orf21Q9P2W6 132 aa16.05■□□□□ 0.16
CHRNA7-231ENST00000637786 NAGKQ9UJ70 344 aa16.05■□□□□ 0.16
CHRNA7-231ENST00000637786 TEX48A0A1B0GUV7 120 aa16.04■□□□□ 0.16
CHRNA7-231ENST00000637786 C9JQL5 133 aa16.04■□□□□ 0.16
CHRNA7-231ENST00000637786 SH2D1AO60880 128 aa16.04■□□□□ 0.16
CHRNA7-231ENST00000637786 CEBPGP53567 150 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 251.9 ms