RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	CFHR3	Q02985	330 aa		11.3	□□□□□ -0.6
NEDD4L-238	ENST00000635997	UTF1	Q5T230	341 aa		11.3	□□□□□ -0.6
NEDD4L-238	ENST00000635997	AMN1	Q8IY45	258 aa		11.3	□□□□□ -0.6
NEDD4L-238	ENST00000635997	NUPR1	O60356	82 aa		11.29	□□□□□ -0.6
NEDD4L-238	ENST00000635997	KLK9	Q9UKQ9	250 aa		11.29	□□□□□ -0.6
NEDD4L-238	ENST00000635997	DSCAML1	Q8TD84	2053 aa		11.29	□□□□□ -0.6
NEDD4L-238	ENST00000635997		F6UB75	175 aa		11.29	□□□□□ -0.6
NEDD4L-238	ENST00000635997	SFTA2	Q6UW10	78 aa		11.29	□□□□□ -0.6
NEDD4L-238	ENST00000635997	VCX2	Q9H322	139 aa		11.29	□□□□□ -0.6
NEDD4L-238	ENST00000635997	SPCS1	Q9Y6A9	102 aa		11.29	□□□□□ -0.6
NEDD4L-238	ENST00000635997	KIR2DL5B	A0A0G2JN68	375 aa		11.29	□□□□□ -0.6
NEDD4L-238	ENST00000635997	KIR2DL5B	A0A0G2JPC4	375 aa		11.29	□□□□□ -0.6
NEDD4L-238	ENST00000635997	KIR2DL5A	Q8N109	375 aa		11.29	□□□□□ -0.6
NEDD4L-238	ENST00000635997	USP24	Q9UPU5	2620 aa		11.29	□□□□□ -0.6
NEDD4L-238	ENST00000635997	ATP5L	O75964	103 aa		11.29	□□□□□ -0.6
NEDD4L-238	ENST00000635997	IGLC2	P0DOY2	106 aa		11.29	□□□□□ -0.6
NEDD4L-238	ENST00000635997	IGLC3	P0DOY3	106 aa		11.29	□□□□□ -0.6
NEDD4L-238	ENST00000635997	YPEL3	P61236	119 aa	Predicted RBP	11.29	□□□□□ -0.6
NEDD4L-238	ENST00000635997	CACNG7	P62955	275 aa		11.28	□□□□□ -0.6
NEDD4L-238	ENST00000635997	ZNF295-AS1	Q8N0V1	137 aa		11.28	□□□□□ -0.6
NEDD4L-238	ENST00000635997	MGAM2	Q2M2H8	2515 aa		11.28	□□□□□ -0.6
NEDD4L-238	ENST00000635997	DNAJC9-AS1	A6NH13	148 aa		11.28	□□□□□ -0.6
NEDD4L-238	ENST00000635997	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.28	□□□□□ -0.6
NEDD4L-238	ENST00000635997	SRSF8	Q9BRL6	282 aa	Known RBP	11.28	□□□□□ -0.6
NEDD4L-238	ENST00000635997	TRGV11	A0A075B6L2	103 aa		11.28	□□□□□ -0.6
NEDD4L-238	ENST00000635997	LINC01619	G3V211	115 aa		11.28	□□□□□ -0.6
NEDD4L-238	ENST00000635997		F2Z2F3	143 aa		11.27	□□□□□ -0.6
NEDD4L-238	ENST00000635997	C8orf49	Q96NF6	230 aa		11.27	□□□□□ -0.6
NEDD4L-238	ENST00000635997		A0A1B0GW15	77 aa		11.27	□□□□□ -0.6
NEDD4L-238	ENST00000635997	TMEM238	C9JI98	176 aa		11.27	□□□□□ -0.6
NEDD4L-238	ENST00000635997	BCL6B	Q8N143	479 aa	Predicted RBP	11.27	□□□□□ -0.6
NEDD4L-238	ENST00000635997	TRBV19	A0A075B6N1	114 aa		11.27	□□□□□ -0.61
NEDD4L-238	ENST00000635997	SPRY2	O43597	315 aa		11.27	□□□□□ -0.61
NEDD4L-238	ENST00000635997	C8orf86	Q6ZUL3	223 aa		11.27	□□□□□ -0.61
NEDD4L-238	ENST00000635997		A0A087X0K7	114 aa		11.27	□□□□□ -0.61
NEDD4L-238	ENST00000635997		Q86TA4	180 aa		11.27	□□□□□ -0.61
NEDD4L-238	ENST00000635997	TMEM75	Q8N9X5	138 aa		11.27	□□□□□ -0.61
NEDD4L-238	ENST00000635997	ATR	Q13535	2644 aa		11.26	□□□□□ -0.61
NEDD4L-238	ENST00000635997	IGHV3-16	A0A0C4DH30	117 aa		11.26	□□□□□ -0.61
NEDD4L-238	ENST00000635997	hDV102S1	A0JD36	115 aa		11.26	□□□□□ -0.61
NEDD4L-238	ENST00000635997	IFI27	P40305	119 aa	Predicted RBP	11.26	□□□□□ -0.61
NEDD4L-238	ENST00000635997	ZNF114	Q8NC26	417 aa		11.26	□□□□□ -0.61
NEDD4L-238	ENST00000635997	CIRBP	Q14011	172 aa	Known RBP	11.26	□□□□□ -0.61
NEDD4L-238	ENST00000635997	ZNF491	Q8N8L2	437 aa		11.26	□□□□□ -0.61
NEDD4L-238	ENST00000635997		A0A087WX48	190 aa		11.26	□□□□□ -0.61
NEDD4L-238	ENST00000635997	IGHV7-81	A0A0B4J1V7	117 aa		11.26	□□□□□ -0.61
NEDD4L-238	ENST00000635997	TMEM213	A2RRL7	107 aa		11.26	□□□□□ -0.61
NEDD4L-238	ENST00000635997		Q8N7P7	452 aa		11.26	□□□□□ -0.61
NEDD4L-238	ENST00000635997	OR11H6	Q8NGC7	330 aa		11.26	□□□□□ -0.61
NEDD4L-238	ENST00000635997	SIGMAR1	Q99720	223 aa		11.26	□□□□□ -0.61
NEDD4L-238	ENST00000635997	CRLF1	O75462	422 aa		11.25	□□□□□ -0.61
NEDD4L-238	ENST00000635997	APOM	O95445	188 aa		11.25	□□□□□ -0.61
NEDD4L-238	ENST00000635997	ELANE	P08246	267 aa		11.25	□□□□□ -0.61
NEDD4L-238	ENST00000635997	POU2AF1	Q16633	256 aa		11.25	□□□□□ -0.61
NEDD4L-238	ENST00000635997	GNB1L	Q9BYB4	327 aa		11.25	□□□□□ -0.61
NEDD4L-238	ENST00000635997	CYSLTR1	Q9Y271	337 aa		11.25	□□□□□ -0.61
NEDD4L-238	ENST00000635997		E7EUB6	86 aa		11.25	□□□□□ -0.61
NEDD4L-238	ENST00000635997	FNDC10	F2Z333	226 aa		11.25	□□□□□ -0.61
NEDD4L-238	ENST00000635997	HBD	P02042	147 aa		11.25	□□□□□ -0.61
NEDD4L-238	ENST00000635997		Q6ZSR3	168 aa		11.25	□□□□□ -0.61
NEDD4L-238	ENST00000635997	OR2K2	Q8NGT1	345 aa		11.25	□□□□□ -0.61
NEDD4L-238	ENST00000635997	TRAV9-1	A0A075B6T8	112 aa		11.25	□□□□□ -0.61
NEDD4L-238	ENST00000635997	CCL24	O00175	119 aa		11.25	□□□□□ -0.61
NEDD4L-238	ENST00000635997	CD300E	Q496F6	205 aa	Predicted RBP	11.25	□□□□□ -0.61
NEDD4L-238	ENST00000635997	LYRM7	Q5U5X0	104 aa		11.25	□□□□□ -0.61
NEDD4L-238	ENST00000635997	LYPD1	Q8N2G4	141 aa		11.25	□□□□□ -0.61
NEDD4L-238	ENST00000635997	SRSF1	Q07955	248 aa	Known RBP eCLIP	11.24	□□□□□ -0.61
NEDD4L-238	ENST00000635997	LSM4	Q9Y4Z0	139 aa	Known RBP	11.24	□□□□□ -0.61
NEDD4L-238	ENST00000635997	PPBP	P02775	128 aa		11.24	□□□□□ -0.61
NEDD4L-238	ENST00000635997	TEX43	Q6ZNM6	134 aa		11.24	□□□□□ -0.61
NEDD4L-238	ENST00000635997	SLC25A2	Q9BXI2	301 aa		11.24	□□□□□ -0.61
NEDD4L-238	ENST00000635997	CFAP46	Q8IYW2	2715 aa		11.24	□□□□□ -0.61
NEDD4L-238	ENST00000635997	LMO4	P61968	165 aa		11.24	□□□□□ -0.61
NEDD4L-238	ENST00000635997	COA6	Q5JTJ3	125 aa	Known RBP	11.24	□□□□□ -0.61
NEDD4L-238	ENST00000635997	CD28	P10747	220 aa		11.23	□□□□□ -0.61
NEDD4L-238	ENST00000635997	IFI27L1	Q96BM0	104 aa		11.23	□□□□□ -0.61
NEDD4L-238	ENST00000635997	NXT2	Q9NPJ8	142 aa	Known RBP	11.23	□□□□□ -0.61
NEDD4L-238	ENST00000635997	ANKRD39	Q53RE8	183 aa		11.23	□□□□□ -0.61
NEDD4L-238	ENST00000635997	VGLL1	Q99990	258 aa		11.23	□□□□□ -0.61
NEDD4L-238	ENST00000635997	C9orf66	Q5T8R8	295 aa		11.23	□□□□□ -0.61
NEDD4L-238	ENST00000635997	C5orf30	Q96GV9	206 aa		11.23	□□□□□ -0.61
NEDD4L-238	ENST00000635997	C1orf159	Q96HA4	380 aa		11.23	□□□□□ -0.61
NEDD4L-238	ENST00000635997	NCKAP5	O14513	1909 aa		11.23	□□□□□ -0.61
NEDD4L-238	ENST00000635997	PDE6H	Q13956	83 aa		11.23	□□□□□ -0.61
NEDD4L-238	ENST00000635997	OR9G4	Q8NGQ1	327 aa		11.23	□□□□□ -0.61
NEDD4L-238	ENST00000635997	TEP1	Q99973	2627 aa	Known RBP	11.23	□□□□□ -0.61
NEDD4L-238	ENST00000635997	TMEM238L	A0A1B0GVL6	79 aa		11.22	□□□□□ -0.61
NEDD4L-238	ENST00000635997		A6NJY4	79 aa		11.22	□□□□□ -0.61
NEDD4L-238	ENST00000635997	IGLV1-47	P01700	117 aa		11.22	□□□□□ -0.61
NEDD4L-238	ENST00000635997	MBD6	Q96DN6	1003 aa		11.22	□□□□□ -0.61
NEDD4L-238	ENST00000635997	MRPS16	Q9Y3D3	137 aa	Known RBP	11.22	□□□□□ -0.61
NEDD4L-238	ENST00000635997	PROP1	O75360	226 aa		11.22	□□□□□ -0.61
NEDD4L-238	ENST00000635997	INS	P01308	110 aa		11.22	□□□□□ -0.61
NEDD4L-238	ENST00000635997	GUSBP1	Q15486	140 aa		11.22	□□□□□ -0.61
NEDD4L-238	ENST00000635997	ANKRD17	O75179	2603 aa	Known RBP	11.22	□□□□□ -0.61
NEDD4L-238	ENST00000635997	HOXD3	P31249	432 aa	Predicted RBP	11.22	□□□□□ -0.61
NEDD4L-238	ENST00000635997	C11orf68	Q9H3H3	251 aa	Known RBP	11.22	□□□□□ -0.61
NEDD4L-238	ENST00000635997	UNC80	Q8N2C7	3258 aa		11.22	□□□□□ -0.61
NEDD4L-238	ENST00000635997	NDUFA4	O00483	81 aa		11.21	□□□□□ -0.61
NEDD4L-238	ENST00000635997	IGKV1-17	P01599	117 aa		11.21	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms