RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 ROS1P08922 2347 aa11.42□□□□□ -0.58
CACNA1A-220ENST00000635988 MYMXA0A1B0GTQ4 84 aa11.42□□□□□ -0.58
CACNA1A-220ENST00000635988 ODF3BA8MYP8 253 aa11.42□□□□□ -0.58
CACNA1A-220ENST00000635988 PRAC2D3DTV9 90 aa11.42□□□□□ -0.58
CACNA1A-220ENST00000635988 M0R1W7 72 aa11.42□□□□□ -0.58
CACNA1A-220ENST00000635988 TRGV3P03979 118 aa11.42□□□□□ -0.58
CACNA1A-220ENST00000635988 NDPQ00604 133 aa11.42□□□□□ -0.58
CACNA1A-220ENST00000635988 SCGB2A2Q13296 93 aa11.42□□□□□ -0.58
CACNA1A-220ENST00000635988 Q5PR19 223 aa11.42□□□□□ -0.58
CACNA1A-220ENST00000635988 PRO0461Q9UI25 63 aa11.42□□□□□ -0.58
CACNA1A-220ENST00000635988 LOC400499M0QZD8 3231 aa11.41□□□□□ -0.58
CACNA1A-220ENST00000635988 BUB3O43684 328 aa11.41□□□□□ -0.58
CACNA1A-220ENST00000635988 TMEM78Q5T7P6 136 aa11.41□□□□□ -0.58
CACNA1A-220ENST00000635988 SH2D6Q7Z4S9 175 aa11.41□□□□□ -0.58
CACNA1A-220ENST00000635988 MRPL53Q96EL3 112 aaKnown RBP11.41□□□□□ -0.58
CACNA1A-220ENST00000635988 OOSP1A8MZH6 123 aa11.41□□□□□ -0.58
CACNA1A-220ENST00000635988 SLC25A16P16260 332 aa11.41□□□□□ -0.58
CACNA1A-220ENST00000635988 ORMDL2Q53FV1 153 aa11.41□□□□□ -0.58
CACNA1A-220ENST00000635988 UFC1Q9Y3C8 167 aa11.41□□□□□ -0.58
CACNA1A-220ENST00000635988 IGHV7-4-1A0A0J9YVY3 117 aa11.4□□□□□ -0.58
CACNA1A-220ENST00000635988 K7EMI3 77 aa11.4□□□□□ -0.58
CACNA1A-220ENST00000635988 PRTN3P24158 256 aa11.4□□□□□ -0.58
CACNA1A-220ENST00000635988 SPANXN1Q5VSR9 72 aa11.4□□□□□ -0.58
CACNA1A-220ENST00000635988 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.4□□□□□ -0.58
CACNA1A-220ENST00000635988 AGPAT4-IT1Q9H0P7 198 aa11.4□□□□□ -0.58
CACNA1A-220ENST00000635988 HOXA3O43365 443 aaPredicted RBP11.4□□□□□ -0.59
CACNA1A-220ENST00000635988 SMIM2Q9BVW6 85 aa11.4□□□□□ -0.59
CACNA1A-220ENST00000635988 C11orf21Q9P2W6 132 aa11.4□□□□□ -0.59
CACNA1A-220ENST00000635988 PKDREJQ9NTG1 2253 aa11.4□□□□□ -0.59
CACNA1A-220ENST00000635988 CUL9Q8IWT3 2517 aa11.39□□□□□ -0.59
CACNA1A-220ENST00000635988 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.39□□□□□ -0.59
CACNA1A-220ENST00000635988 AMTNQ6UX39 209 aa11.39□□□□□ -0.59
CACNA1A-220ENST00000635988 Q8N6K4 173 aa11.39□□□□□ -0.59
CACNA1A-220ENST00000635988 ATP6V0E2Q8NHE4 81 aa11.39□□□□□ -0.59
CACNA1A-220ENST00000635988 EFNA4P52798 201 aa11.39□□□□□ -0.59
CACNA1A-220ENST00000635988 TCTEX1D4Q5JR98 221 aa11.39□□□□□ -0.59
CACNA1A-220ENST00000635988 RNF182Q8N6D2 247 aa11.39□□□□□ -0.59
CACNA1A-220ENST00000635988 EBI3Q14213 229 aa11.38□□□□□ -0.59
CACNA1A-220ENST00000635988 SCGB3A1Q96QR1 104 aa11.38□□□□□ -0.59
CACNA1A-220ENST00000635988 ZFAND3Q9H8U3 227 aa11.38□□□□□ -0.59
CACNA1A-220ENST00000635988 SPENQ96T58 3664 aaKnown RBP11.38□□□□□ -0.59
CACNA1A-220ENST00000635988 TRAV26-2A0A0B4J265 109 aa11.38□□□□□ -0.59
CACNA1A-220ENST00000635988 KLRD1Q13241 179 aa11.38□□□□□ -0.59
CACNA1A-220ENST00000635988 C9orf47Q6ZRZ4 202 aa11.37□□□□□ -0.59
CACNA1A-220ENST00000635988 TOMM6Q96B49 74 aa11.37□□□□□ -0.59
CACNA1A-220ENST00000635988 TIMD4Q96H15 378 aa11.37□□□□□ -0.59
CACNA1A-220ENST00000635988 RAXQ9Y2V3 346 aa11.37□□□□□ -0.59
CACNA1A-220ENST00000635988 RP1L1Q8IWN7 2480 aaPredicted RBP11.37□□□□□ -0.59
CACNA1A-220ENST00000635988 APOMO95445 188 aa11.37□□□□□ -0.59
CACNA1A-220ENST00000635988 FAM110DQ8TAY7 271 aaPredicted RBP11.37□□□□□ -0.59
CACNA1A-220ENST00000635988 WFDC12Q8WWY7 111 aa11.37□□□□□ -0.59
CACNA1A-220ENST00000635988 C20orf78Q9BR46 151 aa11.37□□□□□ -0.59
CACNA1A-220ENST00000635988 TNRC18O15417 2968 aaPredicted RBP11.37□□□□□ -0.59
CACNA1A-220ENST00000635988 IGHV3OR16-8A0A075B7F1 116 aa11.36□□□□□ -0.59
CACNA1A-220ENST00000635988 IGHV7-81A0A0B4J1V7 117 aa11.36□□□□□ -0.59
CACNA1A-220ENST00000635988 KLK9Q2XQG4 91 aa11.36□□□□□ -0.59
CACNA1A-220ENST00000635988 NEXN-AS1Q8NBZ9 246 aa11.36□□□□□ -0.59
CACNA1A-220ENST00000635988 DLX4Q92988 240 aaPredicted RBP11.36□□□□□ -0.59
CACNA1A-220ENST00000635988 KLK9Q9UKQ9 250 aa11.36□□□□□ -0.59
CACNA1A-220ENST00000635988 IGHV3-35A0A0C4DH35 117 aa11.36□□□□□ -0.59
CACNA1A-220ENST00000635988 C15orf32Q32M92 178 aa11.36□□□□□ -0.59
CACNA1A-220ENST00000635988 MINOS1Q5TGZ0 78 aa11.36□□□□□ -0.59
CACNA1A-220ENST00000635988 MORN3Q6PF18 240 aaPredicted RBP11.36□□□□□ -0.59
CACNA1A-220ENST00000635988 C1QTNF4Q9BXJ3 329 aa11.36□□□□□ -0.59
CACNA1A-220ENST00000635988 CYSLTR1Q9Y271 337 aa11.36□□□□□ -0.59
CACNA1A-220ENST00000635988 MINOS1-NBL1R4GNA1 71 aa11.36□□□□□ -0.59
CACNA1A-220ENST00000635988 LGALS1P09382 135 aaKnown RBP11.35□□□□□ -0.59
CACNA1A-220ENST00000635988 LYRM7Q5U5X0 104 aa11.35□□□□□ -0.59
CACNA1A-220ENST00000635988 VMO1Q7Z5L0 202 aa11.35□□□□□ -0.59
CACNA1A-220ENST00000635988 MRPL16Q9NX20 251 aaKnown RBP11.35□□□□□ -0.59
CACNA1A-220ENST00000635988 LENEPQ9Y5L5 61 aa11.35□□□□□ -0.59
CACNA1A-220ENST00000635988 CLEC3BP05452 202 aa11.35□□□□□ -0.59
CACNA1A-220ENST00000635988 CKS1BP61024 79 aa11.35□□□□□ -0.59
CACNA1A-220ENST00000635988 SUMO2P61956 95 aaKnown RBP11.35□□□□□ -0.59
CACNA1A-220ENST00000635988 PGPEP1Q9NXJ5 209 aa11.35□□□□□ -0.59
CACNA1A-220ENST00000635988 FOXI1Q12951 378 aa11.34□□□□□ -0.59
CACNA1A-220ENST00000635988 MTURNQ8N3F0 131 aa11.34□□□□□ -0.59
CACNA1A-220ENST00000635988 TRAV8-2A0A0B4J237 113 aa11.34□□□□□ -0.59
CACNA1A-220ENST00000635988 CFAP126Q5VTH2 177 aa11.34□□□□□ -0.59
CACNA1A-220ENST00000635988 METTL26Q96S19 204 aa11.34□□□□□ -0.59
CACNA1A-220ENST00000635988 MUC3AQ02505 3323 aa11.34□□□□□ -0.59
CACNA1A-220ENST00000635988 CLPSL1A2RUU4 121 aa11.33□□□□□ -0.6
CACNA1A-220ENST00000635988 C8orf86Q6ZUL3 223 aa11.33□□□□□ -0.6
CACNA1A-220ENST00000635988 AGRNO00468 2067 aa11.33□□□□□ -0.6
CACNA1A-220ENST00000635988 CENPVL3A0A0U1RRI6 287 aa11.33□□□□□ -0.6
CACNA1A-220ENST00000635988 H3BVH4 76 aa11.33□□□□□ -0.6
CACNA1A-220ENST00000635988 LCNL1Q6ZST4 164 aa11.33□□□□□ -0.6
CACNA1A-220ENST00000635988 PRADC1Q9BSG0 188 aa11.33□□□□□ -0.6
CACNA1A-220ENST00000635988 PPP1R17O96001 155 aa11.32□□□□□ -0.6
CACNA1A-220ENST00000635988 INSL3P51460 131 aa11.32□□□□□ -0.6
CACNA1A-220ENST00000635988 Q8N9W7 124 aa11.32□□□□□ -0.6
CACNA1A-220ENST00000635988 VCX2Q9H322 139 aa11.32□□□□□ -0.6
CACNA1A-220ENST00000635988 ZFHX4Q86UP3 3567 aa11.32□□□□□ -0.6
CACNA1A-220ENST00000635988 ZNF815PA8K554 130 aa11.32□□□□□ -0.6
CACNA1A-220ENST00000635988 M0R381 172 aa11.32□□□□□ -0.6
CACNA1A-220ENST00000635988 UBE2D1P51668 147 aa11.32□□□□□ -0.6
CACNA1A-220ENST00000635988 SCGB1D4Q6XE38 83 aa11.32□□□□□ -0.6
CACNA1A-220ENST00000635988 DPH3P1Q9H4G8 78 aa11.32□□□□□ -0.6
CACNA1A-220ENST00000635988 MSRB2Q9Y3D2 182 aa11.32□□□□□ -0.6
CACNA1A-220ENST00000635988 IGHV3-66A0A0C4DH42 116 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms