RNA–Protein interactions for RNA: ENST00000632758.1

LIMS4-203, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 1,580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-203ENST00000632758 OR5I1Q13606 314 aa10.82□□□□□ -0.68
LIMS4-203ENST00000632758 LINC00322Q6ZN03 302 aaPredicted RBP10.82□□□□□ -0.68
LIMS4-203ENST00000632758 LOC102724200A0A096LPH7 203 aaPredicted RBP10.82□□□□□ -0.68
LIMS4-203ENST00000632758 KLLNB2CW77 178 aa10.82□□□□□ -0.68
LIMS4-203ENST00000632758 MGST1P10620 155 aaKnown RBP10.82□□□□□ -0.68
LIMS4-203ENST00000632758 RNASE4P34096 147 aaKnown RBP10.82□□□□□ -0.68
LIMS4-203ENST00000632758 BTN1A1Q13410 526 aa10.82□□□□□ -0.68
LIMS4-203ENST00000632758 SEC11CQ9BY50 192 aa10.82□□□□□ -0.68
LIMS4-203ENST00000632758 SDF2L1Q9HCN8 221 aa10.82□□□□□ -0.68
LIMS4-203ENST00000632758 XCL2Q9UBD3 114 aa10.82□□□□□ -0.68
LIMS4-203ENST00000632758 NAT8Q9UHE5 227 aa10.82□□□□□ -0.68
LIMS4-203ENST00000632758 TRBV7-9A0A0J9YWB2 115 aa10.81□□□□□ -0.68
LIMS4-203ENST00000632758 GCGP01275 180 aa10.81□□□□□ -0.68
LIMS4-203ENST00000632758 RPL23P62829 140 aaKnown RBP10.81□□□□□ -0.68
LIMS4-203ENST00000632758 SMUG1Q53HV7 270 aa10.81□□□□□ -0.68
LIMS4-203ENST00000632758 GFI1BQ5VTD9 330 aa10.81□□□□□ -0.68
LIMS4-203ENST00000632758 PRR27Q6MZM9 219 aa10.81□□□□□ -0.68
LIMS4-203ENST00000632758 COX8CQ7Z4L0 72 aa10.81□□□□□ -0.68
LIMS4-203ENST00000632758 LINC01551Q86U37 167 aa10.81□□□□□ -0.68
LIMS4-203ENST00000632758 CSTL1Q9H114 145 aa10.81□□□□□ -0.68
LIMS4-203ENST00000632758 A8MZ25 164 aa10.8□□□□□ -0.68
LIMS4-203ENST00000632758 RBMY1A1P0DJD3 496 aaKnown RBP10.8□□□□□ -0.68
LIMS4-203ENST00000632758 RBMY1CP0DJD4 496 aa10.8□□□□□ -0.68
LIMS4-203ENST00000632758 TSPOP30536 169 aa10.8□□□□□ -0.68
LIMS4-203ENST00000632758 NUTF2P61970 127 aaKnown RBP10.8□□□□□ -0.68
LIMS4-203ENST00000632758 RBMY1FQ15415 496 aaKnown RBP10.8□□□□□ -0.68
LIMS4-203ENST00000632758 C10orf91Q5T1B1 145 aa10.8□□□□□ -0.68
LIMS4-203ENST00000632758 NIPSNAP3BQ9BS92 247 aa10.8□□□□□ -0.68
LIMS4-203ENST00000632758 TRAV12-3A0A0B4J271 114 aa10.79□□□□□ -0.68
LIMS4-203ENST00000632758 C7orf71A4D174 169 aa10.79□□□□□ -0.68
LIMS4-203ENST00000632758 MORN3Q6PF18 240 aaPredicted RBP10.79□□□□□ -0.68
LIMS4-203ENST00000632758 LY96Q9Y6Y9 160 aa10.79□□□□□ -0.68
LIMS4-203ENST00000632758 ZNF324O75467 553 aaPredicted RBP10.78□□□□□ -0.68
LIMS4-203ENST00000632758 CA1P00915 261 aaPredicted RBP10.78□□□□□ -0.68
LIMS4-203ENST00000632758 FRMD6-AS1P0C7T7 363 aa10.78□□□□□ -0.68
LIMS4-203ENST00000632758 ADIRFQ15847 76 aa10.78□□□□□ -0.68
LIMS4-203ENST00000632758 DEFB121Q5J5C9 76 aa10.78□□□□□ -0.68
LIMS4-203ENST00000632758 SMIM12Q96EX1 92 aa10.78□□□□□ -0.68
LIMS4-203ENST00000632758 CARHSP1Q9Y2V2 147 aaKnown RBP10.78□□□□□ -0.68
LIMS4-203ENST00000632758 KRBOX1C9JBD0 128 aa10.77□□□□□ -0.68
LIMS4-203ENST00000632758 SH2D1AO60880 128 aa10.77□□□□□ -0.68
LIMS4-203ENST00000632758 Q6AWC8 147 aa10.77□□□□□ -0.68
LIMS4-203ENST00000632758 C1orf158Q8N1D5 194 aa10.77□□□□□ -0.68
LIMS4-203ENST00000632758 CSNK1G2-AS1Q8NCQ2 148 aa10.77□□□□□ -0.68
LIMS4-203ENST00000632758 C11orf21Q9P2W6 132 aa10.77□□□□□ -0.68
LIMS4-203ENST00000632758 FABP5P3A8MUU1 101 aa10.77□□□□□ -0.69
LIMS4-203ENST00000632758 APOC3P02656 99 aa10.77□□□□□ -0.69
LIMS4-203ENST00000632758 PFN1P07737 140 aaKnown RBP10.77□□□□□ -0.69
LIMS4-203ENST00000632758 ISOC2Q96AB3 205 aa10.77□□□□□ -0.69
LIMS4-203ENST00000632758 RNASE7Q9H1E1 156 aaKnown RBP10.77□□□□□ -0.69
LIMS4-203ENST00000632758 KIR2DL5BA0A0G2JN68 375 aa10.76□□□□□ -0.69
LIMS4-203ENST00000632758 KIR2DL5BA0A0G2JPC4 375 aa10.76□□□□□ -0.69
LIMS4-203ENST00000632758 C19orf71A6NCJ1 209 aa10.76□□□□□ -0.69
LIMS4-203ENST00000632758 AMBPP02760 352 aa10.76□□□□□ -0.69
LIMS4-203ENST00000632758 PRM2P04554 102 aa10.76□□□□□ -0.69
LIMS4-203ENST00000632758 APOC4P55056 127 aa10.76□□□□□ -0.69
LIMS4-203ENST00000632758 FAM162BQ5T6X4 162 aa10.76□□□□□ -0.69
LIMS4-203ENST00000632758 KIR2DL5AQ8N109 375 aa10.76□□□□□ -0.69
LIMS4-203ENST00000632758 NUDT10Q8NFP7 164 aa10.76□□□□□ -0.69
LIMS4-203ENST00000632758 KIR2DL5BQ8NHK3 375 aa10.76□□□□□ -0.69
LIMS4-203ENST00000632758 NUDT11Q96G61 164 aa10.76□□□□□ -0.69
LIMS4-203ENST00000632758 TRAV21A0A0B4J279 112 aa10.75□□□□□ -0.69
LIMS4-203ENST00000632758 INSP01308 110 aa10.75□□□□□ -0.69
LIMS4-203ENST00000632758 MUC21Q5SSG8 566 aa10.75□□□□□ -0.69
LIMS4-203ENST00000632758 IGHV3OR16-12A0A075B7B8 117 aa10.74□□□□□ -0.69
LIMS4-203ENST00000632758 M0R036 132 aa10.74□□□□□ -0.69
LIMS4-203ENST00000632758 RPL19P84098 196 aaKnown RBP10.74□□□□□ -0.69
LIMS4-203ENST00000632758 C1QTNF4Q9BXJ3 329 aa10.74□□□□□ -0.69
LIMS4-203ENST00000632758 NAGKQ9UJ70 344 aa10.74□□□□□ -0.69
LIMS4-203ENST00000632758 IGKV3D-20A0A0C4DH25 116 aa10.73□□□□□ -0.69
LIMS4-203ENST00000632758 ATP6V1G1O75348 118 aa10.73□□□□□ -0.69
LIMS4-203ENST00000632758 ERVFC1-1P60608 527 aa10.73□□□□□ -0.69
LIMS4-203ENST00000632758 PNRC1Q12796 327 aaPredicted RBP10.73□□□□□ -0.69
LIMS4-203ENST00000632758 ANXA2RQ3ZCQ2 193 aa10.73□□□□□ -0.69
LIMS4-203ENST00000632758 ZNF575Q86XF7 245 aa10.73□□□□□ -0.69
LIMS4-203ENST00000632758 DAZAP1Q96EP5 407 aaKnown RBP10.73□□□□□ -0.69
LIMS4-203ENST00000632758 LINC01587Q99440 93 aa10.73□□□□□ -0.69
LIMS4-203ENST00000632758 BIN3Q9NQY0 253 aa10.73□□□□□ -0.69
LIMS4-203ENST00000632758 TMSB15BA0A087X1C1 80 aa10.73□□□□□ -0.69
LIMS4-203ENST00000632758 ORM1P02763 201 aa10.73□□□□□ -0.69
LIMS4-203ENST00000632758 HTN1P15515 57 aa10.73□□□□□ -0.69
LIMS4-203ENST00000632758 DEFB135Q30KP9 77 aa10.73□□□□□ -0.69
LIMS4-203ENST00000632758 IBA57Q5T440 356 aaKnown RBP10.73□□□□□ -0.69
LIMS4-203ENST00000632758 MRAPQ8TCY5 172 aa10.73□□□□□ -0.69
LIMS4-203ENST00000632758 SFRP2Q96HF1 295 aa10.73□□□□□ -0.69
LIMS4-203ENST00000632758 UBE2CO00762 179 aa10.72□□□□□ -0.69
LIMS4-203ENST00000632758 GNRH2O43555 120 aa10.72□□□□□ -0.69
LIMS4-203ENST00000632758 P01737 135 aa10.72□□□□□ -0.69
LIMS4-203ENST00000632758 DEFA6Q01524 100 aa10.72□□□□□ -0.69
LIMS4-203ENST00000632758 FAM231DQ6ZW35 169 aa10.72□□□□□ -0.69
LIMS4-203ENST00000632758 SBSPONQ8IVN8 264 aa10.72□□□□□ -0.69
LIMS4-203ENST00000632758 CLRN3Q8NCR9 226 aa10.72□□□□□ -0.69
LIMS4-203ENST00000632758 C20orf144Q9BQM9 153 aa10.72□□□□□ -0.69
LIMS4-203ENST00000632758 TMEM208Q9BTX3 173 aa10.72□□□□□ -0.69
LIMS4-203ENST00000632758 OSTCQ9NRP0 149 aa10.72□□□□□ -0.69
LIMS4-203ENST00000632758 TP53TG3Q9ULZ0 132 aa10.72□□□□□ -0.69
LIMS4-203ENST00000632758 IGHV1OR15-1A0A075B7D0 117 aa10.71□□□□□ -0.69
LIMS4-203ENST00000632758 H7BYZ3 331 aa10.71□□□□□ -0.69
LIMS4-203ENST00000632758 GATCO43716 136 aaKnown RBP10.71□□□□□ -0.69
LIMS4-203ENST00000632758 RNF212Q495C1 297 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms