RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 WFDC3Q8IUB2 231 aa7.12□□□□□ -1.27
PDLIM5-223ENST00000627587 Q8TAT8 98 aa7.12□□□□□ -1.27
PDLIM5-223ENST00000627587 ZC2HC1AQ96GY0 325 aa7.12□□□□□ -1.27
PDLIM5-223ENST00000627587 BTF3L4Q96K17 158 aa7.12□□□□□ -1.27
PDLIM5-223ENST00000627587 FAM210BQ96KR6 192 aa7.12□□□□□ -1.27
PDLIM5-223ENST00000627587 C8orf49Q96NF6 230 aa7.12□□□□□ -1.27
PDLIM5-223ENST00000627587 PRR25Q96S07 402 aa7.12□□□□□ -1.27
PDLIM5-223ENST00000627587 PYGO2Q9BRQ0 406 aa7.12□□□□□ -1.27
PDLIM5-223ENST00000627587 SORL1Q92673 2214 aa7.12□□□□□ -1.27
PDLIM5-223ENST00000627587 DNAH3Q8TD57 4116 aa7.11□□□□□ -1.27
PDLIM5-223ENST00000627587 RPS10P46783 165 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-223ENST00000627587 TFPI2P48307 235 aa7.11□□□□□ -1.27
PDLIM5-223ENST00000627587 SNRPD3P62318 126 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-223ENST00000627587 C9orf47Q6ZRZ4 202 aa7.11□□□□□ -1.27
PDLIM5-223ENST00000627587 COX8CQ7Z4L0 72 aa7.11□□□□□ -1.27
PDLIM5-223ENST00000627587 OR10J6PQ8NGY7 276 aa7.11□□□□□ -1.27
PDLIM5-223ENST00000627587 DYNLRB2Q8TF09 96 aa7.11□□□□□ -1.27
PDLIM5-223ENST00000627587 AGRNO00468 2067 aa7.11□□□□□ -1.27
PDLIM5-223ENST00000627587 TRAV9-1A0A075B6T8 112 aa7.11□□□□□ -1.27
PDLIM5-223ENST00000627587 CA1P00915 261 aaPredicted RBP7.11□□□□□ -1.27
PDLIM5-223ENST00000627587 CSN3P07498 182 aa7.11□□□□□ -1.27
PDLIM5-223ENST00000627587 IGLL1P15814 213 aa7.11□□□□□ -1.27
PDLIM5-223ENST00000627587 ZNF138P52744 262 aa7.11□□□□□ -1.27
PDLIM5-223ENST00000627587 RBPMS2Q6ZRY4 209 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-223ENST00000627587 OR4B1Q8NGF8 309 aa7.11□□□□□ -1.27
PDLIM5-223ENST00000627587 AGPAT4-IT1Q9H0P7 198 aa7.11□□□□□ -1.27
PDLIM5-223ENST00000627587 RPP21Q9H633 154 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-223ENST00000627587 NOTCH3Q9UM47 2321 aa7.1□□□□□ -1.27
PDLIM5-223ENST00000627587 NPIPB6E9PJ23 425 aa7.1□□□□□ -1.27
PDLIM5-223ENST00000627587 K7EQG2 157 aa7.1□□□□□ -1.27
PDLIM5-223ENST00000627587 ZNF705DP0CH99 300 aaPredicted RBP7.1□□□□□ -1.27
PDLIM5-223ENST00000627587 ZNF705BP0CI00 300 aaPredicted RBP7.1□□□□□ -1.27
PDLIM5-223ENST00000627587 RPL19P84098 196 aaKnown RBP7.1□□□□□ -1.27
PDLIM5-223ENST00000627587 CT83Q5H943 113 aa7.1□□□□□ -1.27
PDLIM5-223ENST00000627587 DEFB121Q5J5C9 76 aa7.1□□□□□ -1.27
PDLIM5-223ENST00000627587 ZNF575Q86XF7 245 aa7.1□□□□□ -1.27
PDLIM5-223ENST00000627587 PPP1R14DQ9NXH3 145 aa7.1□□□□□ -1.27
PDLIM5-223ENST00000627587 DNAH9Q9NYC9 4486 aa7.09□□□□□ -1.27
PDLIM5-223ENST00000627587 SMIM27A0A1W2PRY6 76 aa7.09□□□□□ -1.27
PDLIM5-223ENST00000627587 A8MWL6 223 aa7.09□□□□□ -1.27
PDLIM5-223ENST00000627587 C1orf196B1AJZ1 125 aa7.09□□□□□ -1.27
PDLIM5-223ENST00000627587 PF4P02776 101 aa7.09□□□□□ -1.27
PDLIM5-223ENST00000627587 ZNF688P0C7X2 276 aa7.09□□□□□ -1.27
PDLIM5-223ENST00000627587 ZNF80P51504 273 aaPredicted RBP7.09□□□□□ -1.27
PDLIM5-223ENST00000627587 HIST1H1AQ02539 215 aaPredicted RBP7.09□□□□□ -1.27
PDLIM5-223ENST00000627587 FAM162BQ5T6X4 162 aa7.09□□□□□ -1.27
PDLIM5-223ENST00000627587 OR8A1Q8NGG7 326 aa7.09□□□□□ -1.27
PDLIM5-223ENST00000627587 TSKUQ8WUA8 353 aa7.09□□□□□ -1.27
PDLIM5-223ENST00000627587 LINC00477Q96M19 166 aa7.09□□□□□ -1.27
PDLIM5-223ENST00000627587 WWC2-AS2Q96NR7 200 aa7.09□□□□□ -1.27
PDLIM5-223ENST00000627587 LENEPQ9Y5L5 61 aa7.09□□□□□ -1.27
PDLIM5-223ENST00000627587 F6UB75 175 aa7.09□□□□□ -1.28
PDLIM5-223ENST00000627587 K7EIL1 84 aa7.09□□□□□ -1.28
PDLIM5-223ENST00000627587 PHOX2AO14813 284 aa7.09□□□□□ -1.28
PDLIM5-223ENST00000627587 TYMSP04818 313 aa7.09□□□□□ -1.28
PDLIM5-223ENST00000627587 FRMD6-AS1P0C7T7 363 aa7.09□□□□□ -1.28
PDLIM5-223ENST00000627587 TCL1AP56279 114 aa7.09□□□□□ -1.28
PDLIM5-223ENST00000627587 PSMG4Q5JS54 123 aa7.09□□□□□ -1.28
PDLIM5-223ENST00000627587 OR2D3Q8NGH3 330 aa7.09□□□□□ -1.28
PDLIM5-223ENST00000627587 MCRIP2Q9BUT9 160 aaKnown RBP7.09□□□□□ -1.28
PDLIM5-223ENST00000627587 SRD5A3Q9H8P0 318 aa7.09□□□□□ -1.28
PDLIM5-223ENST00000627587 SIGLEC8Q9NYZ4 499 aa7.09□□□□□ -1.28
PDLIM5-223ENST00000627587 TRAV2A0A0B4J234 112 aa7.08□□□□□ -1.28
PDLIM5-223ENST00000627587 SH2D1AO60880 128 aa7.08□□□□□ -1.28
PDLIM5-223ENST00000627587 RAB5BP61020 215 aa7.08□□□□□ -1.28
PDLIM5-223ENST00000627587 EGFEM1PQ0D2K5 195 aa7.08□□□□□ -1.28
PDLIM5-223ENST00000627587 DEFB114Q30KQ6 69 aa7.08□□□□□ -1.28
PDLIM5-223ENST00000627587 TMEM61Q8N0U2 210 aa7.08□□□□□ -1.28
PDLIM5-223ENST00000627587 NAT8BQ9UHF3 227 aa7.08□□□□□ -1.28
PDLIM5-223ENST00000627587 KMT2CQ8NEZ4 4911 aaKnown RBP7.08□□□□□ -1.28
PDLIM5-223ENST00000627587 NBEAL2Q6ZNJ1 2754 aa7.07□□□□□ -1.28
PDLIM5-223ENST00000627587 FAM231BA6NCW3 169 aa7.07□□□□□ -1.28
PDLIM5-223ENST00000627587 FABP5P3A8MUU1 101 aa7.07□□□□□ -1.28
PDLIM5-223ENST00000627587 HIGD1CA8MV81 97 aa7.07□□□□□ -1.28
PDLIM5-223ENST00000627587 CD300EQ496F6 205 aaPredicted RBP7.07□□□□□ -1.28
PDLIM5-223ENST00000627587 GDF5OSQ5U4N7 250 aa7.07□□□□□ -1.28
PDLIM5-223ENST00000627587 NEU1Q99519 415 aa7.07□□□□□ -1.28
PDLIM5-223ENST00000627587 B9D2Q9BPU9 175 aa7.07□□□□□ -1.28
PDLIM5-223ENST00000627587 GFRA4Q9GZZ7 299 aa7.07□□□□□ -1.28
PDLIM5-223ENST00000627587 TRAV25A0A0B4J276 109 aa7.07□□□□□ -1.28
PDLIM5-223ENST00000627587 TRBV7-9A0A0J9YWB2 115 aa7.07□□□□□ -1.28
PDLIM5-223ENST00000627587 XKRY2A2RUG3 117 aa7.07□□□□□ -1.28
PDLIM5-223ENST00000627587 IZUMO1RA6ND01 250 aa7.07□□□□□ -1.28
PDLIM5-223ENST00000627587 NHLRC4P0CG21 123 aaPredicted RBP7.07□□□□□ -1.28
PDLIM5-223ENST00000627587 PRR9Q5T870 116 aa7.07□□□□□ -1.28
PDLIM5-223ENST00000627587 EBLN2Q6P2I7 272 aa7.07□□□□□ -1.28
PDLIM5-223ENST00000627587 Q6ZQT7 251 aa7.07□□□□□ -1.28
PDLIM5-223ENST00000627587 NUP35Q8NFH5 326 aa7.07□□□□□ -1.28
PDLIM5-223ENST00000627587 GTSF1Q8WW33 167 aa7.07□□□□□ -1.28
PDLIM5-223ENST00000627587 FAM19A4Q96LR4 140 aa7.07□□□□□ -1.28
PDLIM5-223ENST00000627587 SPAG8Q99932 426 aaPredicted RBP7.07□□□□□ -1.28
PDLIM5-223ENST00000627587 TMEM189A5PLL7 270 aa7.06□□□□□ -1.28
PDLIM5-223ENST00000627587 OR4C46A6NHA9 309 aa7.06□□□□□ -1.28
PDLIM5-223ENST00000627587 SPINK4O60575 86 aa7.06□□□□□ -1.28
PDLIM5-223ENST00000627587 TRGC2P03986 189 aa7.06□□□□□ -1.28
PDLIM5-223ENST00000627587 ZFP82Q8N141 532 aa7.06□□□□□ -1.28
PDLIM5-223ENST00000627587 A0A0J9YX75 114 aa7.05□□□□□ -1.28
PDLIM5-223ENST00000627587 SAP30O75446 220 aa7.05□□□□□ -1.28
PDLIM5-223ENST00000627587 GZMBP10144 247 aa7.05□□□□□ -1.28
PDLIM5-223ENST00000627587 KRTAP10-11P60412 298 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms