RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 MEF2BQ02080 365 aaPredicted RBP10.65□□□□□ -0.7
PNKP-221ENST00000627317 BTN1A1Q13410 526 aa10.65□□□□□ -0.7
PNKP-221ENST00000627317 LYPD6BQ8NI32 183 aa10.65□□□□□ -0.7
PNKP-221ENST00000627317 LINC00479Q96M42 142 aa10.65□□□□□ -0.7
PNKP-221ENST00000627317 TREM1Q9NP99 234 aa10.65□□□□□ -0.7
PNKP-221ENST00000627317 X6R8D5 127 aa10.65□□□□□ -0.7
PNKP-221ENST00000627317 H7BYZ3 331 aa10.64□□□□□ -0.71
PNKP-221ENST00000627317 RBMY1A1P0DJD3 496 aaKnown RBP10.64□□□□□ -0.71
PNKP-221ENST00000627317 RBMY1CP0DJD4 496 aa10.64□□□□□ -0.71
PNKP-221ENST00000627317 RBMY1FQ15415 496 aaKnown RBP10.64□□□□□ -0.71
PNKP-221ENST00000627317 PRR9Q5T870 116 aa10.64□□□□□ -0.71
PNKP-221ENST00000627317 ZFAND6Q6FIF0 208 aa10.64□□□□□ -0.71
PNKP-221ENST00000627317 Q86TA4 180 aa10.64□□□□□ -0.71
PNKP-221ENST00000627317 PCNPQ8WW12 178 aaKnown RBP10.64□□□□□ -0.71
PNKP-221ENST00000627317 FMC1Q96HJ9 113 aa10.64□□□□□ -0.71
PNKP-221ENST00000627317 LINC01587Q99440 93 aa10.64□□□□□ -0.71
PNKP-221ENST00000627317 VAX2Q9UIW0 290 aa10.64□□□□□ -0.71
PNKP-221ENST00000627317 IGHV4-28A0A0C4DH34 117 aa10.63□□□□□ -0.71
PNKP-221ENST00000627317 LOC102723971A0A1B0GUV8 181 aa10.63□□□□□ -0.71
PNKP-221ENST00000627317 SMIM9A6NGZ8 99 aa10.63□□□□□ -0.71
PNKP-221ENST00000627317 PDE6DO43924 150 aa10.63□□□□□ -0.71
PNKP-221ENST00000627317 IGLV2-11P01706 119 aa10.63□□□□□ -0.71
PNKP-221ENST00000627317 RRN3P1Q2M238 152 aa10.63□□□□□ -0.71
PNKP-221ENST00000627317 Q8NAQ8 132 aa10.63□□□□□ -0.71
PNKP-221ENST00000627317 NEU1Q99519 415 aa10.63□□□□□ -0.71
PNKP-221ENST00000627317 A0A0J9YWU9 116 aa10.62□□□□□ -0.71
PNKP-221ENST00000627317 S100A9P06702 114 aaKnown RBP10.62□□□□□ -0.71
PNKP-221ENST00000627317 HTN1P15515 57 aa10.62□□□□□ -0.71
PNKP-221ENST00000627317 TAS2R60P59551 318 aa10.62□□□□□ -0.71
PNKP-221ENST00000627317 SAPCD1Q5SSQ6 148 aa10.62□□□□□ -0.71
PNKP-221ENST00000627317 C2CD4CQ8TF44 421 aa10.62□□□□□ -0.71
PNKP-221ENST00000627317 C11orf52Q96A22 123 aa10.62□□□□□ -0.71
PNKP-221ENST00000627317 TVP23CQ96ET8 276 aa10.62□□□□□ -0.71
PNKP-221ENST00000627317 C11orf68Q9H3H3 251 aaKnown RBP10.62□□□□□ -0.71
PNKP-221ENST00000627317 RBFOX3A6NFN3 312 aa10.61□□□□□ -0.71
PNKP-221ENST00000627317 ZNF705GA8MUZ8 300 aaPredicted RBP10.61□□□□□ -0.71
PNKP-221ENST00000627317 DEFB4AO15263 64 aa10.61□□□□□ -0.71
PNKP-221ENST00000627317 RAB14P61106 215 aa10.61□□□□□ -0.71
PNKP-221ENST00000627317 TMEM183BQ1AE95 376 aa10.61□□□□□ -0.71
PNKP-221ENST00000627317 SMUG1Q53HV7 270 aa10.61□□□□□ -0.71
PNKP-221ENST00000627317 TOR2AQ5JU69 321 aa10.61□□□□□ -0.71
PNKP-221ENST00000627317 ZNF767PQ75MW2 155 aa10.61□□□□□ -0.71
PNKP-221ENST00000627317 C8orf49Q96NF6 230 aa10.61□□□□□ -0.71
PNKP-221ENST00000627317 PYGO2Q9BRQ0 406 aa10.61□□□□□ -0.71
PNKP-221ENST00000627317 KLF12Q9Y4X4 402 aa10.61□□□□□ -0.71
PNKP-221ENST00000627317 TRBV6-1A0A0K0K1D8 114 aa10.6□□□□□ -0.71
PNKP-221ENST00000627317 TMEM189A5PLL7 270 aa10.6□□□□□ -0.71
PNKP-221ENST00000627317 ZNF506Q5JVG8 444 aa10.6□□□□□ -0.71
PNKP-221ENST00000627317 EIF5A2Q9GZV4 153 aaKnown RBP10.6□□□□□ -0.71
PNKP-221ENST00000627317 ZFP30Q9Y2G7 519 aa10.6□□□□□ -0.71
PNKP-221ENST00000627317 DNAH1Q9P2D7 4330 aa10.6□□□□□ -0.71
PNKP-221ENST00000627317 TRAV21A0A0B4J279 112 aa10.59□□□□□ -0.71
PNKP-221ENST00000627317 RGS13O14921 159 aa10.59□□□□□ -0.71
PNKP-221ENST00000627317 ZNF324O75467 553 aaPredicted RBP10.59□□□□□ -0.71
PNKP-221ENST00000627317 GCGP01275 180 aa10.59□□□□□ -0.71
PNKP-221ENST00000627317 RPL35P42766 123 aaKnown RBP10.59□□□□□ -0.71
PNKP-221ENST00000627317 EMP1P54849 157 aa10.59□□□□□ -0.71
PNKP-221ENST00000627317 Q6AWC8 147 aa10.59□□□□□ -0.71
PNKP-221ENST00000627317 FAM210AQ96ND0 272 aa10.59□□□□□ -0.71
PNKP-221ENST00000627317 MED9Q9NWA0 146 aa10.59□□□□□ -0.71
PNKP-221ENST00000627317 NAGKQ9UJ70 344 aa10.59□□□□□ -0.71
PNKP-221ENST00000627317 IGHV1OR15-1A0A075B7D0 117 aa10.58□□□□□ -0.72
PNKP-221ENST00000627317 LCE6AA0A183 80 aa10.58□□□□□ -0.72
PNKP-221ENST00000627317 LTAP01374 205 aa10.58□□□□□ -0.72
PNKP-221ENST00000627317 PRM2P04554 102 aa10.58□□□□□ -0.72
PNKP-221ENST00000627317 TMEM263Q8WUH6 116 aaKnown RBP10.58□□□□□ -0.72
PNKP-221ENST00000627317 C16orf74Q96GX8 76 aa10.58□□□□□ -0.72
PNKP-221ENST00000627317 DERL1Q9BUN8 251 aa10.58□□□□□ -0.72
PNKP-221ENST00000627317 PLECQ15149 4684 aaKnown RBP10.57□□□□□ -0.72
PNKP-221ENST00000627317 CBY3A6NI87 242 aa10.57□□□□□ -0.72
PNKP-221ENST00000627317 AZU1P20160 251 aa10.57□□□□□ -0.72
PNKP-221ENST00000627317 MUC21Q5SSG8 566 aa10.57□□□□□ -0.72
PNKP-221ENST00000627317 FAM159AQ6UWV7 190 aa10.57□□□□□ -0.72
PNKP-221ENST00000627317 Q6ZQT7 251 aa10.57□□□□□ -0.72
PNKP-221ENST00000627317 ZNF493Q6ZR52 646 aa10.57□□□□□ -0.72
PNKP-221ENST00000627317 BAGE2Q86Y30 109 aa10.57□□□□□ -0.72
PNKP-221ENST00000627317 EIF4E3Q8N5X7 224 aaKnown RBP10.57□□□□□ -0.72
PNKP-221ENST00000627317 IL17DQ8TAD2 202 aa10.57□□□□□ -0.72
PNKP-221ENST00000627317 LINC00467Q9BRT7 94 aa10.57□□□□□ -0.72
PNKP-221ENST00000627317 TMEM250H0YL14 139 aa10.56□□□□□ -0.72
PNKP-221ENST00000627317 PFN1P07737 140 aaKnown RBP10.56□□□□□ -0.72
PNKP-221ENST00000627317 ZNF80P51504 273 aaPredicted RBP10.56□□□□□ -0.72
PNKP-221ENST00000627317 CEBPGP53567 150 aa10.56□□□□□ -0.72
PNKP-221ENST00000627317 IFITM2Q01629 132 aa10.56□□□□□ -0.72
PNKP-221ENST00000627317 CENPWQ5EE01 88 aa10.56□□□□□ -0.72
PNKP-221ENST00000627317 TMEM183AQ8IXX5 376 aa10.56□□□□□ -0.72
PNKP-221ENST00000627317 NHLRC2Q8NBF2 726 aa10.56□□□□□ -0.72
PNKP-221ENST00000627317 ZC2HC1AQ96GY0 325 aa10.56□□□□□ -0.72
PNKP-221ENST00000627317 ALMS1Q8TCU4 4167 aa10.55□□□□□ -0.72
PNKP-221ENST00000627317 GNG4P50150 75 aa10.55□□□□□ -0.72
PNKP-221ENST00000627317 RNASE8Q8TDE3 154 aaKnown RBP10.55□□□□□ -0.72
PNKP-221ENST00000627317 TRGV11A0A075B6L2 103 aa10.54□□□□□ -0.72
PNKP-221ENST00000627317 TEX48A0A1B0GUV7 120 aa10.54□□□□□ -0.72
PNKP-221ENST00000627317 SNURFLB1AK76 121 aa10.54□□□□□ -0.72
PNKP-221ENST00000627317 ZNF674Q2M3X9 581 aa10.54□□□□□ -0.72
PNKP-221ENST00000627317 ANXA2RQ3ZCQ2 193 aa10.54□□□□□ -0.72
PNKP-221ENST00000627317 CLLU1Q5K131 121 aa10.54□□□□□ -0.72
PNKP-221ENST00000627317 FAM162BQ5T6X4 162 aa10.54□□□□□ -0.72
PNKP-221ENST00000627317 COX8CQ7Z4L0 72 aa10.54□□□□□ -0.72
PNKP-221ENST00000627317 C11orf45Q8TAV5 145 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms