RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 LTAP01374 205 aa6.22□□□□□ -1.41
SGMS1-211ENST00000626236 AMBPP02760 352 aa6.22□□□□□ -1.41
SGMS1-211ENST00000626236 GPX1P07203 203 aa6.22□□□□□ -1.41
SGMS1-211ENST00000626236 GIG44P09565 113 aaPredicted RBP6.22□□□□□ -1.41
SGMS1-211ENST00000626236 CRISP2P16562 243 aa6.22□□□□□ -1.41
SGMS1-211ENST00000626236 RNASE4P34096 147 aaKnown RBP6.22□□□□□ -1.41
SGMS1-211ENST00000626236 BTN1A1Q13410 526 aa6.22□□□□□ -1.41
SGMS1-211ENST00000626236 DEFB135Q30KP9 77 aa6.22□□□□□ -1.41
SGMS1-211ENST00000626236 SAPCD1Q5SSQ6 148 aa6.22□□□□□ -1.41
SGMS1-211ENST00000626236 PRR9Q5T870 116 aa6.22□□□□□ -1.41
SGMS1-211ENST00000626236 CDPF1Q6NVV7 123 aa6.22□□□□□ -1.41
SGMS1-211ENST00000626236 COMMD7Q86VX2 200 aa6.22□□□□□ -1.41
SGMS1-211ENST00000626236 SBSPONQ8IVN8 264 aa6.22□□□□□ -1.41
SGMS1-211ENST00000626236 ZFAND2AQ8N6M9 145 aa6.22□□□□□ -1.41
SGMS1-211ENST00000626236 NHLRC2Q8NBF2 726 aa6.22□□□□□ -1.41
SGMS1-211ENST00000626236 TVP23CQ96ET8 276 aa6.22□□□□□ -1.41
SGMS1-211ENST00000626236 C8orf49Q96NF6 230 aa6.22□□□□□ -1.41
SGMS1-211ENST00000626236 PARLQ9H300 379 aa6.22□□□□□ -1.41
SGMS1-211ENST00000626236 SMDT1Q9H4I9 107 aa6.22□□□□□ -1.41
SGMS1-211ENST00000626236 TRAV12-3A0A0B4J271 114 aa6.21□□□□□ -1.42
SGMS1-211ENST00000626236 LINC00862A6NCI5 91 aa6.21□□□□□ -1.42
SGMS1-211ENST00000626236 KLLNB2CW77 178 aa6.21□□□□□ -1.42
SGMS1-211ENST00000626236 CRXO43186 299 aaPredicted RBP6.21□□□□□ -1.42
SGMS1-211ENST00000626236 NDUFS6O75380 124 aaKnown RBP6.21□□□□□ -1.42
SGMS1-211ENST00000626236 GNG4P50150 75 aa6.21□□□□□ -1.42
SGMS1-211ENST00000626236 TAS2R60P59551 318 aa6.21□□□□□ -1.42
SGMS1-211ENST00000626236 SMUG1Q53HV7 270 aa6.21□□□□□ -1.42
SGMS1-211ENST00000626236 CENPWQ5EE01 88 aa6.21□□□□□ -1.42
SGMS1-211ENST00000626236 GFI1BQ5VTD9 330 aa6.21□□□□□ -1.42
SGMS1-211ENST00000626236 BAGE2Q86Y30 109 aa6.21□□□□□ -1.42
SGMS1-211ENST00000626236 IGF2BP2-AS1Q96M15 143 aa6.21□□□□□ -1.42
SGMS1-211ENST00000626236 RCHY1Q96PM5 261 aa6.21□□□□□ -1.42
SGMS1-211ENST00000626236 ZFP30Q9Y2G7 519 aa6.21□□□□□ -1.42
SGMS1-211ENST00000626236 IGHV3OR16-12A0A075B7B8 117 aa6.2□□□□□ -1.42
SGMS1-211ENST00000626236 C7orf71A4D174 169 aa6.2□□□□□ -1.42
SGMS1-211ENST00000626236 PGPEP1LA6NFU8 196 aa6.2□□□□□ -1.42
SGMS1-211ENST00000626236 ZNF727A8MUV8 499 aa6.2□□□□□ -1.42
SGMS1-211ENST00000626236 GCGP01275 180 aa6.2□□□□□ -1.42
SGMS1-211ENST00000626236 SFTA3P0C7M3 94 aa6.2□□□□□ -1.42
SGMS1-211ENST00000626236 RBMY1A1P0DJD3 496 aaKnown RBP6.2□□□□□ -1.42
SGMS1-211ENST00000626236 RBMY1CP0DJD4 496 aa6.2□□□□□ -1.42
SGMS1-211ENST00000626236 RBMY1FQ15415 496 aaKnown RBP6.2□□□□□ -1.42
SGMS1-211ENST00000626236 UQCC3Q6UW78 93 aa6.2□□□□□ -1.42
SGMS1-211ENST00000626236 Q6ZWC4 215 aa6.2□□□□□ -1.42
SGMS1-211ENST00000626236 TMEM183AQ8IXX5 376 aa6.2□□□□□ -1.42
SGMS1-211ENST00000626236 CSNK1G2-AS1Q8NCQ2 148 aa6.2□□□□□ -1.42
SGMS1-211ENST00000626236 ZC2HC1AQ96GY0 325 aa6.2□□□□□ -1.42
SGMS1-211ENST00000626236 B9D2Q9BPU9 175 aa6.2□□□□□ -1.42
SGMS1-211ENST00000626236 SMIM7Q9BQ49 75 aa6.2□□□□□ -1.42
SGMS1-211ENST00000626236 NIPSNAP3BQ9BS92 247 aa6.2□□□□□ -1.42
SGMS1-211ENST00000626236 TMEM208Q9BTX3 173 aa6.2□□□□□ -1.42
SGMS1-211ENST00000626236 RETNQ9HD89 108 aa6.2□□□□□ -1.42
SGMS1-211ENST00000626236 GOLT1BQ9Y3E0 138 aa6.2□□□□□ -1.42
SGMS1-211ENST00000626236 TRBV20OR9-2A0A075B6H5 130 aa6.19□□□□□ -1.42
SGMS1-211ENST00000626236 C9JCJ5 164 aa6.19□□□□□ -1.42
SGMS1-211ENST00000626236 SPRY2O43597 315 aa6.19□□□□□ -1.42
SGMS1-211ENST00000626236 MGST1P10620 155 aaKnown RBP6.19□□□□□ -1.42
SGMS1-211ENST00000626236 ZNF80P51504 273 aaPredicted RBP6.19□□□□□ -1.42
SGMS1-211ENST00000626236 PRR27Q6MZM9 219 aa6.19□□□□□ -1.42
SGMS1-211ENST00000626236 Q6ZQT7 251 aa6.19□□□□□ -1.42
SGMS1-211ENST00000626236 C1orf158Q8N1D5 194 aa6.19□□□□□ -1.42
SGMS1-211ENST00000626236 RNF183Q96D59 192 aa6.19□□□□□ -1.42
SGMS1-211ENST00000626236 SPATA25Q9BR10 227 aa6.19□□□□□ -1.42
SGMS1-211ENST00000626236 FBN3Q75N90 2809 aa6.19□□□□□ -1.42
SGMS1-211ENST00000626236 PRKDCP78527 4128 aaKnown RBP6.18□□□□□ -1.42
SGMS1-211ENST00000626236 DNAH9Q9NYC9 4486 aa6.18□□□□□ -1.42
SGMS1-211ENST00000626236 TRAV21A0A0B4J279 112 aa6.18□□□□□ -1.42
SGMS1-211ENST00000626236 ZNF324O75467 553 aaPredicted RBP6.18□□□□□ -1.42
SGMS1-211ENST00000626236 IGLV2-8P01709 118 aa6.18□□□□□ -1.42
SGMS1-211ENST00000626236 PFN1P07737 140 aaKnown RBP6.18□□□□□ -1.42
SGMS1-211ENST00000626236 HTN1P15515 57 aa6.18□□□□□ -1.42
SGMS1-211ENST00000626236 FAM74A3Q4VXF1 159 aa6.18□□□□□ -1.42
SGMS1-211ENST00000626236 SOHLH1Q5JUK2 328 aa6.18□□□□□ -1.42
SGMS1-211ENST00000626236 Q6AWC8 147 aa6.18□□□□□ -1.42
SGMS1-211ENST00000626236 ZNF705AQ6ZN79 300 aaPredicted RBP6.18□□□□□ -1.42
SGMS1-211ENST00000626236 COX8CQ7Z4L0 72 aa6.18□□□□□ -1.42
SGMS1-211ENST00000626236 TMEM256Q8N2U0 113 aa6.18□□□□□ -1.42
SGMS1-211ENST00000626236 EIF4E3Q8N5X7 224 aaKnown RBP6.18□□□□□ -1.42
SGMS1-211ENST00000626236 OR11H2Q8NH07 326 aa6.18□□□□□ -1.42
SGMS1-211ENST00000626236 LINC01587Q99440 93 aa6.18□□□□□ -1.42
SGMS1-211ENST00000626236 C20orf144Q9BQM9 153 aa6.18□□□□□ -1.42
SGMS1-211ENST00000626236 TM2D3Q9BRN9 247 aa6.18□□□□□ -1.42
SGMS1-211ENST00000626236 OVOL2Q9BRP0 275 aa6.18□□□□□ -1.42
SGMS1-211ENST00000626236 MLST8Q9BVC4 326 aa6.18□□□□□ -1.42
SGMS1-211ENST00000626236 ZMAT4Q9H898 229 aa6.18□□□□□ -1.42
SGMS1-211ENST00000626236 NAGKQ9UJ70 344 aa6.18□□□□□ -1.42
SGMS1-211ENST00000626236 NBEAL2Q6ZNJ1 2754 aa6.18□□□□□ -1.42
SGMS1-211ENST00000626236 FABP5P3A8MUU1 101 aa6.17□□□□□ -1.42
SGMS1-211ENST00000626236 ZNF705GA8MUZ8 300 aaPredicted RBP6.17□□□□□ -1.42
SGMS1-211ENST00000626236 H7BYZ3 331 aa6.17□□□□□ -1.42
SGMS1-211ENST00000626236 K7EN84 100 aa6.17□□□□□ -1.42
SGMS1-211ENST00000626236 EIF4EBP3O60516 100 aaPredicted RBP6.17□□□□□ -1.42
SGMS1-211ENST00000626236 SH2D1AO60880 128 aa6.17□□□□□ -1.42
SGMS1-211ENST00000626236 PRM2P04554 102 aa6.17□□□□□ -1.42
SGMS1-211ENST00000626236 CRIP1P50238 77 aa6.17□□□□□ -1.42
SGMS1-211ENST00000626236 TMEM241Q24JQ0 296 aa6.17□□□□□ -1.42
SGMS1-211ENST00000626236 MUC21Q5SSG8 566 aa6.17□□□□□ -1.42
SGMS1-211ENST00000626236 FAM162BQ5T6X4 162 aa6.17□□□□□ -1.42
SGMS1-211ENST00000626236 FAM159AQ6UWV7 190 aa6.17□□□□□ -1.42
SGMS1-211ENST00000626236 OCC1Q8TAD7 63 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms