RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 ZNF266Q14584 549 aa7.54□□□□□ -1.2
SSBP4-215ENST00000625926 PQLC2Q6ZP29 291 aa7.54□□□□□ -1.2
SSBP4-215ENST00000625926 Q6ZQT7 251 aa7.54□□□□□ -1.2
SSBP4-215ENST00000625926 OR10G4Q8NGN3 311 aa7.54□□□□□ -1.2
SSBP4-215ENST00000625926 OR10G9Q8NGN4 311 aa7.54□□□□□ -1.2
SSBP4-215ENST00000625926 OR10G7Q8NGN6 311 aa7.54□□□□□ -1.2
SSBP4-215ENST00000625926 CMTM2Q8TAZ6 248 aa7.54□□□□□ -1.2
SSBP4-215ENST00000625926 HYLS1Q96M11 299 aa7.54□□□□□ -1.2
SSBP4-215ENST00000625926 ARPC5LQ9BPX5 153 aa7.54□□□□□ -1.2
SSBP4-215ENST00000625926 OTORQ9NRC9 128 aa7.54□□□□□ -1.2
SSBP4-215ENST00000625926 TP53TG3Q9ULZ0 132 aa7.54□□□□□ -1.2
SSBP4-215ENST00000625926 LENEPQ9Y5L5 61 aa7.54□□□□□ -1.2
SSBP4-215ENST00000625926 RAB2AP61019 212 aa7.53□□□□□ -1.2
SSBP4-215ENST00000625926 ARL6IP6Q8N6S5 226 aa7.53□□□□□ -1.2
SSBP4-215ENST00000625926 TMED6Q8WW62 240 aa7.53□□□□□ -1.2
SSBP4-215ENST00000625926 Q9H8V8 135 aa7.53□□□□□ -1.2
SSBP4-215ENST00000625926 ESRGQ1W209 222 aa7.52□□□□□ -1.21
SSBP4-215ENST00000625926 MUC21Q5SSG8 566 aa7.52□□□□□ -1.21
SSBP4-215ENST00000625926 Q6AWC8 147 aa7.52□□□□□ -1.21
SSBP4-215ENST00000625926 C6orf223Q8N319 242 aa7.52□□□□□ -1.21
SSBP4-215ENST00000625926 HSD17B11Q8NBQ5 300 aa7.52□□□□□ -1.21
SSBP4-215ENST00000625926 VSIG2Q96IQ7 327 aa7.52□□□□□ -1.21
SSBP4-215ENST00000625926 ST6GAL2Q96JF0 529 aa7.52□□□□□ -1.21
SSBP4-215ENST00000625926 AQP10Q96PS8 301 aa7.52□□□□□ -1.21
SSBP4-215ENST00000625926 MUC4Q99102 2169 aa7.52□□□□□ -1.21
SSBP4-215ENST00000625926 HMGB3O15347 200 aaKnown RBP7.51□□□□□ -1.21
SSBP4-215ENST00000625926 ZNF415Q09FC8 603 aa7.51□□□□□ -1.21
SSBP4-215ENST00000625926 SLAQ13239 276 aa7.51□□□□□ -1.21
SSBP4-215ENST00000625926 FAM159AQ6UWV7 190 aa7.51□□□□□ -1.21
SSBP4-215ENST00000625926 OR2G3Q8NGZ4 309 aa7.51□□□□□ -1.21
SSBP4-215ENST00000625926 ASB13Q8WXK3 278 aa7.51□□□□□ -1.21
SSBP4-215ENST00000625926 PSMG3Q9BT73 122 aaPredicted RBP7.51□□□□□ -1.21
SSBP4-215ENST00000625926 UPK3BQ9BT76 320 aa7.51□□□□□ -1.21
SSBP4-215ENST00000625926 MRPL16Q9NX20 251 aaKnown RBP7.51□□□□□ -1.21
SSBP4-215ENST00000625926 RPH3ALQ9UNE2 315 aa7.51□□□□□ -1.21
SSBP4-215ENST00000625926 TRGV11A0A075B6L2 103 aa7.5□□□□□ -1.21
SSBP4-215ENST00000625926 A0A096LPF7 62 aa7.5□□□□□ -1.21
SSBP4-215ENST00000625926 PAX4O43316 350 aa7.5□□□□□ -1.21
SSBP4-215ENST00000625926 IGHV3-53P01767 116 aa7.5□□□□□ -1.21
SSBP4-215ENST00000625926 MBP02144 154 aa7.5□□□□□ -1.21
SSBP4-215ENST00000625926 GIPP09681 153 aaPredicted RBP7.5□□□□□ -1.21
SSBP4-215ENST00000625926 STAG3L2P0CL84 134 aa7.5□□□□□ -1.21
SSBP4-215ENST00000625926 STAG3L3P0CL85 134 aa7.5□□□□□ -1.21
SSBP4-215ENST00000625926 ATP6V0CP27449 155 aa7.5□□□□□ -1.21
SSBP4-215ENST00000625926 CDC34P49427 236 aaPredicted RBP7.5□□□□□ -1.21
SSBP4-215ENST00000625926 SERF2P84101 59 aa7.5□□□□□ -1.21
SSBP4-215ENST00000625926 Q5BKY6 102 aa7.5□□□□□ -1.21
SSBP4-215ENST00000625926 GOLT1AQ6ZVE7 132 aa7.5□□□□□ -1.21
SSBP4-215ENST00000625926 INO80EQ8NBZ0 244 aaPredicted RBP7.5□□□□□ -1.21
SSBP4-215ENST00000625926 RAB24Q969Q5 203 aa7.5□□□□□ -1.21
SSBP4-215ENST00000625926 SPXQ9BT56 116 aa7.5□□□□□ -1.21
SSBP4-215ENST00000625926 MDFICQ9P1T7 246 aa7.5□□□□□ -1.21
SSBP4-215ENST00000625926 HHLA3Q9XRX5 114 aa7.5□□□□□ -1.21
SSBP4-215ENST00000625926 MRPS16Q9Y3D3 137 aaKnown RBP7.5□□□□□ -1.21
SSBP4-215ENST00000625926 ARL14EPLP0DKL9 152 aa7.49□□□□□ -1.21
SSBP4-215ENST00000625926 MED14OSP0DP75 135 aa7.49□□□□□ -1.21
SSBP4-215ENST00000625926 TMEM183BQ1AE95 376 aa7.49□□□□□ -1.21
SSBP4-215ENST00000625926 TDRG1Q3Y452 100 aa7.49□□□□□ -1.21
SSBP4-215ENST00000625926 TTC32Q5I0X7 151 aa7.49□□□□□ -1.21
SSBP4-215ENST00000625926 TMEM183AQ8IXX5 376 aa7.49□□□□□ -1.21
SSBP4-215ENST00000625926 TREM1Q9NP99 234 aa7.49□□□□□ -1.21
SSBP4-215ENST00000625926 PRO0255Q9UI72 69 aa7.49□□□□□ -1.21
SSBP4-215ENST00000625926 TNFSF18Q9UNG2 199 aa7.49□□□□□ -1.21
SSBP4-215ENST00000625926 ICOSQ9Y6W8 199 aa7.49□□□□□ -1.21
SSBP4-215ENST00000625926 TRAV8-1A0A0A6YYK1 113 aa7.48□□□□□ -1.21
SSBP4-215ENST00000625926 TRAV21A0A0B4J279 112 aa7.48□□□□□ -1.21
SSBP4-215ENST00000625926 SERTM2A0A1B0GWG4 89 aa7.48□□□□□ -1.21
SSBP4-215ENST00000625926 A0A1W2PPQ1 181 aa7.48□□□□□ -1.21
SSBP4-215ENST00000625926 CRYBA4P53673 196 aa7.48□□□□□ -1.21
SSBP4-215ENST00000625926 GNG5P63218 68 aa7.48□□□□□ -1.21
SSBP4-215ENST00000625926 TNP2Q05952 138 aa7.48□□□□□ -1.21
SSBP4-215ENST00000625926 FHL2Q14192 279 aa7.48□□□□□ -1.21
SSBP4-215ENST00000625926 SUN5Q8TC36 379 aa7.48□□□□□ -1.21
SSBP4-215ENST00000625926 RASL10AQ92737 203 aa7.48□□□□□ -1.21
SSBP4-215ENST00000625926 C8orf49Q96NF6 230 aa7.48□□□□□ -1.21
SSBP4-215ENST00000625926 ACTR3CQ9C0K3 210 aaPredicted RBP7.48□□□□□ -1.21
SSBP4-215ENST00000625926 NAGKQ9UJ70 344 aa7.48□□□□□ -1.21
SSBP4-215ENST00000625926 DNAH6Q9C0G6 4158 aa7.48□□□□□ -1.21
SSBP4-215ENST00000625926 FXYD6-FXYD2A0A087WZ82 144 aa7.47□□□□□ -1.21
SSBP4-215ENST00000625926 BORCS7-ASMTA0A0B4J1R7 106 aa7.47□□□□□ -1.21
SSBP4-215ENST00000625926 TRGV4A0A0C4DH28 118 aa7.47□□□□□ -1.21
SSBP4-215ENST00000625926 K7EQM0 130 aa7.47□□□□□ -1.21
SSBP4-215ENST00000625926 GNRH2O43555 120 aa7.47□□□□□ -1.21
SSBP4-215ENST00000625926 CXorf1O96002 111 aa7.47□□□□□ -1.21
SSBP4-215ENST00000625926 TCRAP04437 139 aa7.47□□□□□ -1.21
SSBP4-215ENST00000625926 GCHFRP30047 84 aa7.47□□□□□ -1.21
SSBP4-215ENST00000625926 MRPL23Q16540 153 aaKnown RBP7.47□□□□□ -1.21
SSBP4-215ENST00000625926 IQCF2Q8IXL9 164 aa7.47□□□□□ -1.21
SSBP4-215ENST00000625926 C5orf17Q8NAS9 161 aa7.47□□□□□ -1.21
SSBP4-215ENST00000625926 TVP23CQ96ET8 276 aa7.47□□□□□ -1.21
SSBP4-215ENST00000625926 NDFIP1Q9BT67 221 aa7.47□□□□□ -1.21
SSBP4-215ENST00000625926 SH3BGRL3Q9H299 93 aa7.47□□□□□ -1.21
SSBP4-215ENST00000625926 TMEM167BQ9NRX6 74 aa7.47□□□□□ -1.21
SSBP4-215ENST00000625926 IGHV3-16A0A0C4DH30 117 aa7.46□□□□□ -1.22
SSBP4-215ENST00000625926 RNF222A6NCQ9 220 aa7.46□□□□□ -1.22
SSBP4-215ENST00000625926 F6UZH7 168 aa7.46□□□□□ -1.22
SSBP4-215ENST00000625926 BTF3P20290 206 aaKnown RBP7.46□□□□□ -1.22
SSBP4-215ENST00000625926 SUMO1P63165 101 aaKnown RBP7.46□□□□□ -1.22
SSBP4-215ENST00000625926 RGS21Q2M5E4 152 aa7.46□□□□□ -1.22
SSBP4-215ENST00000625926 RPL7L1Q6DKI1 246 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms