RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 ZNF138P52744 262 aa12.9□□□□□ -0.34
SMN1-211ENST00000625245 Q8TAT8 98 aa12.9□□□□□ -0.34
SMN1-211ENST00000625245 LY96Q9Y6Y9 160 aa12.9□□□□□ -0.34
SMN1-211ENST00000625245 H2AFB2P0C5Z0 115 aa12.89□□□□□ -0.35
SMN1-211ENST00000625245 MUC21Q5SSG8 566 aa12.89□□□□□ -0.35
SMN1-211ENST00000625245 THAP6Q8TBB0 222 aa12.89□□□□□ -0.35
SMN1-211ENST00000625245 FAM167A-AS1Q96KT0 104 aa12.89□□□□□ -0.35
SMN1-211ENST00000625245 MRPL32Q9BYC8 188 aaKnown RBP12.89□□□□□ -0.35
SMN1-211ENST00000625245 OR51M1Q9H341 326 aa12.89□□□□□ -0.35
SMN1-211ENST00000625245 OR10J4P0C629 311 aa12.88□□□□□ -0.35
SMN1-211ENST00000625245 SFTA3P0C7M3 94 aa12.88□□□□□ -0.35
SMN1-211ENST00000625245 SRIP30626 198 aa12.88□□□□□ -0.35
SMN1-211ENST00000625245 KRTAP10-1P60331 282 aa12.88□□□□□ -0.35
SMN1-211ENST00000625245 IL15RAQ13261 267 aa12.88□□□□□ -0.35
SMN1-211ENST00000625245 FRZBQ92765 325 aa12.88□□□□□ -0.35
SMN1-211ENST00000625245 PAXXQ9BUH6 204 aa12.88□□□□□ -0.35
SMN1-211ENST00000625245 MSRB1Q9NZV6 116 aa12.88□□□□□ -0.35
SMN1-211ENST00000625245 K7EQD1 137 aa12.87□□□□□ -0.35
SMN1-211ENST00000625245 EVI2AP22794 236 aa12.87□□□□□ -0.35
SMN1-211ENST00000625245 NHLH2Q02577 135 aa12.87□□□□□ -0.35
SMN1-211ENST00000625245 Q5VSD8 79 aa12.87□□□□□ -0.35
SMN1-211ENST00000625245 WFDC10BQ8IUB3 73 aa12.87□□□□□ -0.35
SMN1-211ENST00000625245 PCNPQ8WW12 178 aaKnown RBP12.87□□□□□ -0.35
SMN1-211ENST00000625245 ZNF479Q96JC4 524 aa12.87□□□□□ -0.35
SMN1-211ENST00000625245 MDFICQ9P1T7 246 aa12.87□□□□□ -0.35
SMN1-211ENST00000625245 HERC1Q15751 4861 aa12.87□□□□□ -0.35
SMN1-211ENST00000625245 GYPEP15421 78 aa12.86□□□□□ -0.35
SMN1-211ENST00000625245 CSN1S1P47710 185 aa12.86□□□□□ -0.35
SMN1-211ENST00000625245 OR5C1Q8NGR4 320 aa12.86□□□□□ -0.35
SMN1-211ENST00000625245 FXYD5Q96DB9 178 aa12.86□□□□□ -0.35
SMN1-211ENST00000625245 PHYHIPLQ96FC7 376 aa12.86□□□□□ -0.35
SMN1-211ENST00000625245 RANP62826 216 aaKnown RBP12.85□□□□□ -0.35
SMN1-211ENST00000625245 DMBT1Q9UGM3 2413 aaPredicted RBP12.85□□□□□ -0.35
SMN1-211ENST00000625245 TRBV7-9A0A0J9YWB2 115 aa12.84□□□□□ -0.35
SMN1-211ENST00000625245 OR7C2O60412 319 aa12.84□□□□□ -0.35
SMN1-211ENST00000625245 SMR3BP02814 79 aaPredicted RBP12.84□□□□□ -0.35
SMN1-211ENST00000625245 ZNF266Q14584 549 aa12.84□□□□□ -0.35
SMN1-211ENST00000625245 TMEM183BQ1AE95 376 aa12.84□□□□□ -0.35
SMN1-211ENST00000625245 IQCF2Q8IXL9 164 aa12.84□□□□□ -0.35
SMN1-211ENST00000625245 TMEM183AQ8IXX5 376 aa12.84□□□□□ -0.35
SMN1-211ENST00000625245 SLC25A31Q9H0C2 315 aa12.84□□□□□ -0.35
SMN1-211ENST00000625245 FAM240BA0A1B0GVZ2 78 aa12.83□□□□□ -0.36
SMN1-211ENST00000625245 ORM1P02763 201 aa12.83□□□□□ -0.36
SMN1-211ENST00000625245 GCSHP23434 173 aa12.83□□□□□ -0.36
SMN1-211ENST00000625245 FAM159AQ6UWV7 190 aa12.83□□□□□ -0.36
SMN1-211ENST00000625245 OR10G4Q8NGN3 311 aa12.83□□□□□ -0.36
SMN1-211ENST00000625245 SPXQ9BT56 116 aa12.83□□□□□ -0.36
SMN1-211ENST00000625245 FAT1Q14517 4588 aa12.82□□□□□ -0.36
SMN1-211ENST00000625245 K7EP13 123 aa12.82□□□□□ -0.36
SMN1-211ENST00000625245 CRYGDP07320 174 aa12.82□□□□□ -0.36
SMN1-211ENST00000625245 RASL10AQ92737 203 aa12.82□□□□□ -0.36
SMN1-211ENST00000625245 TXNDC17Q9BRA2 123 aa12.82□□□□□ -0.36
SMN1-211ENST00000625245 KCNIP2Q9NS61 270 aa12.82□□□□□ -0.36
SMN1-211ENST00000625245 NAGKQ9UJ70 344 aa12.82□□□□□ -0.36
SMN1-211ENST00000625245 TRGV11A0A075B6L2 103 aa12.81□□□□□ -0.36
SMN1-211ENST00000625245 RBAKDNA6NC62 111 aa12.81□□□□□ -0.36
SMN1-211ENST00000625245 SIX6O95475 246 aa12.81□□□□□ -0.36
SMN1-211ENST00000625245 WDR61Q9GZS3 305 aaKnown RBP12.81□□□□□ -0.36
SMN1-211ENST00000625245 C9JCJ5 164 aa12.8□□□□□ -0.36
SMN1-211ENST00000625245 HAMPP81172 84 aa12.8□□□□□ -0.36
SMN1-211ENST00000625245 LRRC37A5PQ49AS3 106 aa12.8□□□□□ -0.36
SMN1-211ENST00000625245 Q6AWC8 147 aa12.8□□□□□ -0.36
SMN1-211ENST00000625245 OR4C5Q8NGB2 326 aa12.8□□□□□ -0.36
SMN1-211ENST00000625245 HYLS1Q96M11 299 aa12.8□□□□□ -0.36
SMN1-211ENST00000625245 OR5AC2Q9NZP5 309 aa12.8□□□□□ -0.36
SMN1-211ENST00000625245 FLG2Q5D862 2391 aaPredicted RBP12.79□□□□□ -0.36
SMN1-211ENST00000625245 TRAV4A0A0B4J268 109 aa12.79□□□□□ -0.36
SMN1-211ENST00000625245 LOC100131303A0A0U1RQF7 123 aa12.79□□□□□ -0.36
SMN1-211ENST00000625245 C17orf112F2Z3M2 114 aa12.79□□□□□ -0.36
SMN1-211ENST00000625245 PSCAO43653 123 aa12.79□□□□□ -0.36
SMN1-211ENST00000625245 UBE2L3P68036 154 aaKnown RBP12.79□□□□□ -0.36
SMN1-211ENST00000625245 C10orf126Q8N4M7 172 aa12.79□□□□□ -0.36
SMN1-211ENST00000625245 DIRC3C9JPN6 131 aa12.78□□□□□ -0.36
SMN1-211ENST00000625245 GNRH2O43555 120 aa12.78□□□□□ -0.36
SMN1-211ENST00000625245 MZT2BQ6NZ67 158 aa12.78□□□□□ -0.36
SMN1-211ENST00000625245 NHLRC2Q8NBF2 726 aa12.78□□□□□ -0.36
SMN1-211ENST00000625245 CCDC32Q9BV29 185 aa12.78□□□□□ -0.36
SMN1-211ENST00000625245 RPH3ALQ9UNE2 315 aa12.78□□□□□ -0.36
SMN1-211ENST00000625245 VPS13BQ7Z7G8 4022 aa12.78□□□□□ -0.36
SMN1-211ENST00000625245 IGLV5-52A0A0A0MRZ9 124 aa12.77□□□□□ -0.37
SMN1-211ENST00000625245 IGHV3-16A0A0C4DH30 117 aa12.77□□□□□ -0.37
SMN1-211ENST00000625245 FFAR4Q5NUL3 377 aa12.77□□□□□ -0.37
SMN1-211ENST00000625245 LENEPQ9Y5L5 61 aa12.77□□□□□ -0.37
SMN1-211ENST00000625245 H0YIZ8 118 aa12.76□□□□□ -0.37
SMN1-211ENST00000625245 FAM229AH3BQW9 127 aa12.76□□□□□ -0.37
SMN1-211ENST00000625245 M0R2P5 195 aa12.76□□□□□ -0.37
SMN1-211ENST00000625245 EIF3GO75821 320 aaKnown RBP eCLIP12.76□□□□□ -0.37
SMN1-211ENST00000625245 PPT1P50897 306 aa12.76□□□□□ -0.37
SMN1-211ENST00000625245 IGHV3-38A0A0C4DH36 116 aa12.75□□□□□ -0.37
SMN1-211ENST00000625245 KHDC3LQ587J8 217 aa12.75□□□□□ -0.37
SMN1-211ENST00000625245 SH2D6Q7Z4S9 175 aa12.75□□□□□ -0.37
SMN1-211ENST00000625245 CMTM2Q8TAZ6 248 aa12.75□□□□□ -0.37
SMN1-211ENST00000625245 NMES1Q9C002 83 aa12.75□□□□□ -0.37
SMN1-211ENST00000625245 PGPA6NDG6 321 aa12.74□□□□□ -0.37
SMN1-211ENST00000625245 TAS2R45P59539 299 aa12.74□□□□□ -0.37
SMN1-211ENST00000625245 TDRG1Q3Y452 100 aa12.74□□□□□ -0.37
SMN1-211ENST00000625245 ATP5SQ99766 215 aa12.74□□□□□ -0.37
SMN1-211ENST00000625245 TRAV21A0A0B4J279 112 aa12.73□□□□□ -0.37
SMN1-211ENST00000625245 SCGB1C1Q8TD33 95 aa12.73□□□□□ -0.37
SMN1-211ENST00000625245 TMED6Q8WW62 240 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms