RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 A8MWL6 223 aa8.75□□□□□ -1.01
LINC00963-220ENST00000625171 KLLNB2CW77 178 aa8.75□□□□□ -1.01
LINC00963-220ENST00000625171 GATCO43716 136 aaKnown RBP8.75□□□□□ -1.01
LINC00963-220ENST00000625171 ZNF688P0C7X2 276 aa8.75□□□□□ -1.01
LINC00963-220ENST00000625171 S100PP25815 95 aa8.75□□□□□ -1.01
LINC00963-220ENST00000625171 HIST1H1AQ02539 215 aaPredicted RBP8.75□□□□□ -1.01
LINC00963-220ENST00000625171 ERCC8Q13216 396 aa8.75□□□□□ -1.01
LINC00963-220ENST00000625171 PSMG4Q5JS54 123 aa8.75□□□□□ -1.01
LINC00963-220ENST00000625171 FAM162BQ5T6X4 162 aa8.75□□□□□ -1.01
LINC00963-220ENST00000625171 TMEM88Q6PEY1 159 aa8.75□□□□□ -1.01
LINC00963-220ENST00000625171 KCNIP4Q6PIL6 250 aa8.75□□□□□ -1.01
LINC00963-220ENST00000625171 WFDC3Q8IUB2 231 aa8.75□□□□□ -1.01
LINC00963-220ENST00000625171 CBLN2Q8IUK8 224 aa8.75□□□□□ -1.01
LINC00963-220ENST00000625171 ZFAND2AQ8N6M9 145 aa8.75□□□□□ -1.01
LINC00963-220ENST00000625171 TSKUQ8WUA8 353 aa8.75□□□□□ -1.01
LINC00963-220ENST00000625171 RNASE7Q9H1E1 156 aaKnown RBP8.75□□□□□ -1.01
LINC00963-220ENST00000625171 NOTCH1P46531 2555 aa8.74□□□□□ -1.01
LINC00963-220ENST00000625171 P01737 135 aa8.74□□□□□ -1.01
LINC00963-220ENST00000625171 CXCL1P09341 107 aa8.74□□□□□ -1.01
LINC00963-220ENST00000625171 HLA-DRB4P13762 266 aa8.74□□□□□ -1.01
LINC00963-220ENST00000625171 Q6AWC8 147 aa8.74□□□□□ -1.01
LINC00963-220ENST00000625171 NHLRC2Q8NBF2 726 aa8.74□□□□□ -1.01
LINC00963-220ENST00000625171 GPR61Q9BZJ8 451 aa8.74□□□□□ -1.01
LINC00963-220ENST00000625171 RPP21Q9H633 154 aaKnown RBP8.74□□□□□ -1.01
LINC00963-220ENST00000625171 HLA-DRB4X5D2U9 266 aa8.74□□□□□ -1.01
LINC00963-220ENST00000625171 VWFP04275 2813 aa8.74□□□□□ -1.01
LINC00963-220ENST00000625171 PRKDCP78527 4128 aaKnown RBP8.73□□□□□ -1.01
LINC00963-220ENST00000625171 IZUMO1RA6ND01 250 aa8.73□□□□□ -1.01
LINC00963-220ENST00000625171 ZNF705GA8MUZ8 300 aaPredicted RBP8.73□□□□□ -1.01
LINC00963-220ENST00000625171 H3BMM0 161 aa8.73□□□□□ -1.01
LINC00963-220ENST00000625171 TYMSP04818 313 aa8.73□□□□□ -1.01
LINC00963-220ENST00000625171 TSPOP30536 169 aa8.73□□□□□ -1.01
LINC00963-220ENST00000625171 TFPI2P48307 235 aa8.73□□□□□ -1.01
LINC00963-220ENST00000625171 RPS20P60866 119 aaKnown RBP8.73□□□□□ -1.01
LINC00963-220ENST00000625171 LINC01559Q495D7 138 aa8.73□□□□□ -1.01
LINC00963-220ENST00000625171 AMTNQ6UX39 209 aa8.73□□□□□ -1.01
LINC00963-220ENST00000625171 C8orf49Q96NF6 230 aa8.73□□□□□ -1.01
LINC00963-220ENST00000625171 MAP6D1Q9H9H5 199 aa8.73□□□□□ -1.01
LINC00963-220ENST00000625171 WNK1Q9H4A3 2382 aa8.72□□□□□ -1.01
LINC00963-220ENST00000625171 XKRY2A2RUG3 117 aa8.72□□□□□ -1.01
LINC00963-220ENST00000625171 LEPP41159 167 aa8.72□□□□□ -1.01
LINC00963-220ENST00000625171 ZNF80P51504 273 aaPredicted RBP8.72□□□□□ -1.01
LINC00963-220ENST00000625171 DEFB131AP59861 70 aa8.72□□□□□ -1.01
LINC00963-220ENST00000625171 RPL19P84098 196 aaKnown RBP8.72□□□□□ -1.01
LINC00963-220ENST00000625171 ODF3L2Q3SX64 289 aa8.72□□□□□ -1.01
LINC00963-220ENST00000625171 COX19Q49B96 90 aa8.72□□□□□ -1.01
LINC00963-220ENST00000625171 RASL11AQ6T310 242 aa8.72□□□□□ -1.01
LINC00963-220ENST00000625171 Q8TAT8 98 aa8.72□□□□□ -1.01
LINC00963-220ENST00000625171 C19orf73Q9NVV2 129 aa8.72□□□□□ -1.01
LINC00963-220ENST00000625171 TRAV21A0A0B4J279 112 aa8.71□□□□□ -1.02
LINC00963-220ENST00000625171 F6UB75 175 aa8.71□□□□□ -1.02
LINC00963-220ENST00000625171 SH2D1AO60880 128 aa8.71□□□□□ -1.02
LINC00963-220ENST00000625171 DNLZQ5SXM8 178 aa8.71□□□□□ -1.02
LINC00963-220ENST00000625171 GDF5OSQ5U4N7 250 aa8.71□□□□□ -1.02
LINC00963-220ENST00000625171 PRR27Q6MZM9 219 aa8.71□□□□□ -1.02
LINC00963-220ENST00000625171 ZNF575Q86XF7 245 aa8.71□□□□□ -1.02
LINC00963-220ENST00000625171 NAT8BQ9UHF3 227 aa8.71□□□□□ -1.02
LINC00963-220ENST00000625171 OR11H12B2RN74 326 aa8.7□□□□□ -1.02
LINC00963-220ENST00000625171 AMBPP02760 352 aa8.7□□□□□ -1.02
LINC00963-220ENST00000625171 GPX1P07203 203 aa8.7□□□□□ -1.02
LINC00963-220ENST00000625171 ZNF705DP0CH99 300 aaPredicted RBP8.7□□□□□ -1.02
LINC00963-220ENST00000625171 ZNF705BP0CI00 300 aaPredicted RBP8.7□□□□□ -1.02
LINC00963-220ENST00000625171 CDKN1BP46527 198 aa8.7□□□□□ -1.02
LINC00963-220ENST00000625171 TDRG1Q3Y452 100 aa8.7□□□□□ -1.02
LINC00963-220ENST00000625171 WDR73Q6P4I2 378 aa8.7□□□□□ -1.02
LINC00963-220ENST00000625171 ATP5L2Q7Z4Y8 100 aa8.7□□□□□ -1.02
LINC00963-220ENST00000625171 OR2D3Q8NGH3 330 aa8.7□□□□□ -1.02
LINC00963-220ENST00000625171 C20orf144Q9BQM9 153 aa8.7□□□□□ -1.02
LINC00963-220ENST00000625171 A0A1W2PPQ1 181 aa8.69□□□□□ -1.02
LINC00963-220ENST00000625171 TMEM189A5PLL7 270 aa8.69□□□□□ -1.02
LINC00963-220ENST00000625171 ZNF324O75467 553 aaPredicted RBP8.69□□□□□ -1.02
LINC00963-220ENST00000625171 CD33P20138 364 aa8.69□□□□□ -1.02
LINC00963-220ENST00000625171 RAB5AP20339 215 aa8.69□□□□□ -1.02
LINC00963-220ENST00000625171 FAM210BQ96KR6 192 aa8.69□□□□□ -1.02
LINC00963-220ENST00000625171 SRD5A3Q9H8P0 318 aa8.69□□□□□ -1.02
LINC00963-220ENST00000625171 SELENOKQ9Y6D0 94 aa8.69□□□□□ -1.02
LINC00963-220ENST00000625171 SORL1Q92673 2214 aa8.69□□□□□ -1.02
LINC00963-220ENST00000625171 IGKV3D-20A0A0C4DH25 116 aa8.68□□□□□ -1.02
LINC00963-220ENST00000625171 A0A1B0GW15 77 aa8.68□□□□□ -1.02
LINC00963-220ENST00000625171 IGLC6P0CF74 106 aa8.68□□□□□ -1.02
LINC00963-220ENST00000625171 FAM3BP58499 235 aaPredicted RBP8.68□□□□□ -1.02
LINC00963-220ENST00000625171 DEFB1P60022 68 aa8.68□□□□□ -1.02
LINC00963-220ENST00000625171 TRPT1Q86TN4 253 aaKnown RBP8.68□□□□□ -1.02
LINC00963-220ENST00000625171 NUP35Q8NFH5 326 aa8.68□□□□□ -1.02
LINC00963-220ENST00000625171 GTSF1Q8WW33 167 aa8.68□□□□□ -1.02
LINC00963-220ENST00000625171 NEU1Q99519 415 aa8.68□□□□□ -1.02
LINC00963-220ENST00000625171 LINC00467Q9BRT7 94 aa8.68□□□□□ -1.02
LINC00963-220ENST00000625171 SSBP4Q9BWG4 385 aaPredicted RBP8.68□□□□□ -1.02
LINC00963-220ENST00000625171 CNFNQ9BYD5 112 aa8.68□□□□□ -1.02
LINC00963-220ENST00000625171 ZMAT5Q9UDW3 170 aaKnown RBP8.68□□□□□ -1.02
LINC00963-220ENST00000625171 TP53TG3Q9ULZ0 132 aa8.68□□□□□ -1.02
LINC00963-220ENST00000625171 URGCP-MRPS24S4R325 110 aa8.68□□□□□ -1.02
LINC00963-220ENST00000625171 TGIF2-C20orf24A0A0A6YYL0 155 aa8.67□□□□□ -1.02
LINC00963-220ENST00000625171 C7orf71A4D174 169 aa8.67□□□□□ -1.02
LINC00963-220ENST00000625171 HIGD1CA8MV81 97 aa8.67□□□□□ -1.02
LINC00963-220ENST00000625171 F2Z2F3 143 aa8.67□□□□□ -1.02
LINC00963-220ENST00000625171 MED14OSP0DP75 135 aa8.67□□□□□ -1.02
LINC00963-220ENST00000625171 NUTF2P61970 127 aaKnown RBP8.67□□□□□ -1.02
LINC00963-220ENST00000625171 ACTL10Q5JWF8 245 aa8.67□□□□□ -1.02
LINC00963-220ENST00000625171 PRR9Q5T870 116 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms