RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 CDKN1BP46527 198 aa12.74□□□□□ -0.37
SCAMP4-213ENST00000621748 KIR3DS1Q14943 382 aa12.74□□□□□ -0.37
SCAMP4-213ENST00000621748 LINC00477Q96M19 166 aa12.74□□□□□ -0.37
SCAMP4-213ENST00000621748 LINC01587Q99440 93 aa12.74□□□□□ -0.37
SCAMP4-213ENST00000621748 EPDR1Q9UM22 224 aa12.74□□□□□ -0.37
SCAMP4-213ENST00000621748 PLAC8L1A1L4L8 177 aa12.73□□□□□ -0.37
SCAMP4-213ENST00000621748 DIRC3C9JPN6 131 aa12.73□□□□□ -0.37
SCAMP4-213ENST00000621748 HTN3P15516 51 aa12.73□□□□□ -0.37
SCAMP4-213ENST00000621748 TSPOP30536 169 aa12.73□□□□□ -0.37
SCAMP4-213ENST00000621748 DAD1P61803 113 aa12.73□□□□□ -0.37
SCAMP4-213ENST00000621748 CCL20P78556 96 aa12.73□□□□□ -0.37
SCAMP4-213ENST00000621748 HIST1H2BAQ96A08 127 aa12.73□□□□□ -0.37
SCAMP4-213ENST00000621748 EIF5A2Q9GZV4 153 aaKnown RBP12.73□□□□□ -0.37
SCAMP4-213ENST00000621748 VAX2Q9UIW0 290 aa12.73□□□□□ -0.37
SCAMP4-213ENST00000621748 RBAKDNA6NC62 111 aa12.72□□□□□ -0.37
SCAMP4-213ENST00000621748 FBLL1A6NHQ2 334 aaKnown RBP12.72□□□□□ -0.37
SCAMP4-213ENST00000621748 GOLT1AQ6ZVE7 132 aa12.72□□□□□ -0.37
SCAMP4-213ENST00000621748 TMEM256Q8N2U0 113 aa12.72□□□□□ -0.37
SCAMP4-213ENST00000621748 CYB561D1Q8N8Q1 229 aa12.72□□□□□ -0.37
SCAMP4-213ENST00000621748 ATG101Q9BSB4 218 aa12.72□□□□□ -0.37
SCAMP4-213ENST00000621748 NDFIP1Q9BT67 221 aa12.72□□□□□ -0.37
SCAMP4-213ENST00000621748 GGTLC3B5MD39 225 aa12.71□□□□□ -0.37
SCAMP4-213ENST00000621748 PDE6DO43924 150 aa12.71□□□□□ -0.37
SCAMP4-213ENST00000621748 HTN1P15515 57 aa12.71□□□□□ -0.37
SCAMP4-213ENST00000621748 LEPP41159 167 aa12.71□□□□□ -0.37
SCAMP4-213ENST00000621748 TAS2R60P59551 318 aa12.71□□□□□ -0.37
SCAMP4-213ENST00000621748 UBE2G1P62253 170 aa12.71□□□□□ -0.37
SCAMP4-213ENST00000621748 FAM210BQ96KR6 192 aa12.71□□□□□ -0.37
SCAMP4-213ENST00000621748 IGKV2-40A0A087WW87 121 aaPredicted RBP12.7□□□□□ -0.38
SCAMP4-213ENST00000621748 RBFOX3A6NFN3 312 aa12.7□□□□□ -0.38
SCAMP4-213ENST00000621748 LYRM9A8MSI8 78 aa12.7□□□□□ -0.38
SCAMP4-213ENST00000621748 NPIPB6E9PJ23 425 aa12.7□□□□□ -0.38
SCAMP4-213ENST00000621748 PEX7O00628 323 aa12.7□□□□□ -0.38
SCAMP4-213ENST00000621748 IGKV2D-40P01614 121 aaPredicted RBP12.7□□□□□ -0.38
SCAMP4-213ENST00000621748 TCRAP04437 139 aa12.7□□□□□ -0.38
SCAMP4-213ENST00000621748 S100A9P06702 114 aaKnown RBP12.7□□□□□ -0.38
SCAMP4-213ENST00000621748 P0DMU3 169 aa12.7□□□□□ -0.38
SCAMP4-213ENST00000621748 FAM231AP0DMU4 169 aa12.7□□□□□ -0.38
SCAMP4-213ENST00000621748 FAM231CP0DMU5 169 aa12.7□□□□□ -0.38
SCAMP4-213ENST00000621748 CT45A10P0DMU9 189 aa12.7□□□□□ -0.38
SCAMP4-213ENST00000621748 BCL2P10415 239 aa12.7□□□□□ -0.38
SCAMP4-213ENST00000621748 ZNF138P52744 262 aa12.7□□□□□ -0.38
SCAMP4-213ENST00000621748 GNG5P63218 68 aa12.7□□□□□ -0.38
SCAMP4-213ENST00000621748 MEF2BQ02080 365 aaPredicted RBP12.7□□□□□ -0.38
SCAMP4-213ENST00000621748 DNAH17Q9UFH2 4485 aa12.7□□□□□ -0.38
SCAMP4-213ENST00000621748 DEFB130BP0DP73 79 aa12.69□□□□□ -0.38
SCAMP4-213ENST00000621748 DEFB130AP0DP74 79 aa12.69□□□□□ -0.38
SCAMP4-213ENST00000621748 AKR1C3P42330 323 aa12.69□□□□□ -0.38
SCAMP4-213ENST00000621748 ATP5G3P48201 142 aa12.69□□□□□ -0.38
SCAMP4-213ENST00000621748 ERCC8Q13216 396 aa12.69□□□□□ -0.38
SCAMP4-213ENST00000621748 GFI1BQ5VTD9 330 aa12.69□□□□□ -0.38
SCAMP4-213ENST00000621748 C9orf47Q6ZRZ4 202 aa12.69□□□□□ -0.38
SCAMP4-213ENST00000621748 POM121L12Q8N7R1 296 aa12.69□□□□□ -0.38
SCAMP4-213ENST00000621748 PCNPQ8WW12 178 aaKnown RBP12.69□□□□□ -0.38
SCAMP4-213ENST00000621748 FAT2Q9NYQ8 4349 aa12.69□□□□□ -0.38
SCAMP4-213ENST00000621748 TMEM88Q6PEY1 159 aa12.68□□□□□ -0.38
SCAMP4-213ENST00000621748 LYPD6BQ8NI32 183 aa12.68□□□□□ -0.38
SCAMP4-213ENST00000621748 H7BYZ3 331 aa12.67□□□□□ -0.38
SCAMP4-213ENST00000621748 J3KRW8 73 aa12.67□□□□□ -0.38
SCAMP4-213ENST00000621748 NMBP08949 121 aa12.67□□□□□ -0.38
SCAMP4-213ENST00000621748 PEA15Q15121 130 aa12.67□□□□□ -0.38
SCAMP4-213ENST00000621748 RNASE8Q8TDE3 154 aaKnown RBP12.67□□□□□ -0.38
SCAMP4-213ENST00000621748 C16orf74Q96GX8 76 aa12.67□□□□□ -0.38
SCAMP4-213ENST00000621748 FMC1Q96HJ9 113 aa12.67□□□□□ -0.38
SCAMP4-213ENST00000621748 ODF3Q96PU9 254 aa12.67□□□□□ -0.38
SCAMP4-213ENST00000621748 VGLL1Q99990 258 aa12.67□□□□□ -0.38
SCAMP4-213ENST00000621748 C20orf144Q9BQM9 153 aa12.67□□□□□ -0.38
SCAMP4-213ENST00000621748 AGPAT4-IT1Q9H0P7 198 aa12.67□□□□□ -0.38
SCAMP4-213ENST00000621748 GPX1P07203 203 aa12.66□□□□□ -0.38
SCAMP4-213ENST00000621748 FLI1Q01543 452 aaPredicted RBP12.66□□□□□ -0.38
SCAMP4-213ENST00000621748 TOR2AQ5JU69 321 aa12.66□□□□□ -0.38
SCAMP4-213ENST00000621748 CLLU1Q5K131 121 aa12.66□□□□□ -0.38
SCAMP4-213ENST00000621748 SAPCD1Q5SSQ6 148 aa12.66□□□□□ -0.38
SCAMP4-213ENST00000621748 PRNTQ86SH4 94 aa12.66□□□□□ -0.38
SCAMP4-213ENST00000621748 TMEM75Q8N9X5 138 aa12.66□□□□□ -0.38
SCAMP4-213ENST00000621748 MED9Q9NWA0 146 aa12.66□□□□□ -0.38
SCAMP4-213ENST00000621748 TIMM8BQ9Y5J9 83 aaPredicted RBP12.66□□□□□ -0.38
SCAMP4-213ENST00000621748 LENEPQ9Y5L5 61 aa12.66□□□□□ -0.38
SCAMP4-213ENST00000621748 HECTD4Q9Y4D8 3996 aa12.66□□□□□ -0.38
SCAMP4-213ENST00000621748 ZNF493Q6ZR52 646 aa12.65□□□□□ -0.38
SCAMP4-213ENST00000621748 CCDC28AQ8IWP9 274 aa12.65□□□□□ -0.38
SCAMP4-213ENST00000621748 TMEM263Q8WUH6 116 aaKnown RBP12.65□□□□□ -0.38
SCAMP4-213ENST00000621748 FAM210AQ96ND0 272 aa12.65□□□□□ -0.38
SCAMP4-213ENST00000621748 NOP10Q9NPE3 64 aaKnown RBP12.65□□□□□ -0.38
SCAMP4-213ENST00000621748 ZNF492Q9P255 531 aa12.65□□□□□ -0.38
SCAMP4-213ENST00000621748 PSG8Q9UQ74 426 aa12.65□□□□□ -0.38
SCAMP4-213ENST00000621748 TRAV12-3A0A0B4J271 114 aa12.64□□□□□ -0.39
SCAMP4-213ENST00000621748 TRBV7-9A0A0J9YWB2 115 aa12.64□□□□□ -0.39
SCAMP4-213ENST00000621748 SCO2A0A1W2PP80 73 aa12.64□□□□□ -0.39
SCAMP4-213ENST00000621748 CEBPGP53567 150 aa12.64□□□□□ -0.39
SCAMP4-213ENST00000621748 IFITM2Q01629 132 aa12.64□□□□□ -0.39
SCAMP4-213ENST00000621748 ZNF506Q5JVG8 444 aa12.64□□□□□ -0.39
SCAMP4-213ENST00000621748 TREM1Q9NP99 234 aa12.64□□□□□ -0.39
SCAMP4-213ENST00000621748 NACAE9PAV3 2078 aa12.64□□□□□ -0.39
SCAMP4-213ENST00000621748 CBY3A6NI87 242 aa12.63□□□□□ -0.39
SCAMP4-213ENST00000621748 Q8TAT8 98 aa12.63□□□□□ -0.39
SCAMP4-213ENST00000621748 FAM19A4Q96LR4 140 aa12.63□□□□□ -0.39
SCAMP4-213ENST00000621748 SGK494Q96LW2 274 aa12.63□□□□□ -0.39
SCAMP4-213ENST00000621748 ZFP30Q9Y2G7 519 aa12.63□□□□□ -0.39
SCAMP4-213ENST00000621748 TRAV8-1A0A0A6YYK1 113 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms