RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 SPATA25Q9BR10 227 aa7.92□□□□□ -1.14
COL4A6-210ENST00000621266 G3V4G9 280 aa7.92□□□□□ -1.14
COL4A6-210ENST00000621266 MPLKIPQ8TAP9 179 aa7.92□□□□□ -1.14
COL4A6-210ENST00000621266 RTTNQ86VV8 2226 aa7.92□□□□□ -1.14
COL4A6-210ENST00000621266 SIGLEC9Q9Y336 463 aa7.92□□□□□ -1.14
COL4A6-210ENST00000621266 IGKV1-16P04430 117 aa7.92□□□□□ -1.14
COL4A6-210ENST00000621266 SPINK13Q1W4C9 94 aa7.92□□□□□ -1.14
COL4A6-210ENST00000621266 C14orf132Q9NPU4 83 aa7.92□□□□□ -1.14
COL4A6-210ENST00000621266 U3KQE9 123 aa7.92□□□□□ -1.14
COL4A6-210ENST00000621266 CFHR4Q92496 578 aa7.92□□□□□ -1.14
COL4A6-210ENST00000621266 RNF183Q96D59 192 aa7.92□□□□□ -1.14
COL4A6-210ENST00000621266 CLPSL2Q6UWE3 100 aa7.91□□□□□ -1.14
COL4A6-210ENST00000621266 ZNF493Q6ZR52 646 aa7.91□□□□□ -1.14
COL4A6-210ENST00000621266 IGHV1OR15-1A0A075B7D0 117 aa7.91□□□□□ -1.14
COL4A6-210ENST00000621266 Q6P435 159 aa7.91□□□□□ -1.14
COL4A6-210ENST00000621266 ZNRD1Q9P1U0 126 aa7.91□□□□□ -1.14
COL4A6-210ENST00000621266 NLRC5Q86WI3 1866 aa7.91□□□□□ -1.14
COL4A6-210ENST00000621266 ZNRF2Q8NHG8 242 aa7.91□□□□□ -1.14
COL4A6-210ENST00000621266 K7EN84 100 aa7.91□□□□□ -1.14
COL4A6-210ENST00000621266 FOXI1Q12951 378 aa7.9□□□□□ -1.14
COL4A6-210ENST00000621266 C5orf64Q2M2E5 130 aa7.9□□□□□ -1.14
COL4A6-210ENST00000621266 LINC01356Q8N9X3 169 aa7.9□□□□□ -1.14
COL4A6-210ENST00000621266 TANC1Q9C0D5 1861 aa7.9□□□□□ -1.14
COL4A6-210ENST00000621266 ZNF672Q499Z4 452 aaPredicted RBP7.9□□□□□ -1.14
COL4A6-210ENST00000621266 PAX9P55771 341 aa7.9□□□□□ -1.14
COL4A6-210ENST00000621266 MUSTN1Q8IVN3 82 aa7.9□□□□□ -1.14
COL4A6-210ENST00000621266 SRRM5B3KS81 715 aa7.9□□□□□ -1.15
COL4A6-210ENST00000621266 BUB1B-PAK6H3BSN5 160 aa7.9□□□□□ -1.15
COL4A6-210ENST00000621266 PDE6HQ13956 83 aa7.9□□□□□ -1.15
COL4A6-210ENST00000621266 ZNF747Q9BV97 191 aa7.9□□□□□ -1.15
COL4A6-210ENST00000621266 SMIM2Q9BVW6 85 aa7.9□□□□□ -1.15
COL4A6-210ENST00000621266 LRRK1Q38SD2 2015 aa7.9□□□□□ -1.15
COL4A6-210ENST00000621266 CLPSP04118 112 aa7.9□□□□□ -1.15
COL4A6-210ENST00000621266 PLA2G5P39877 138 aa7.9□□□□□ -1.15
COL4A6-210ENST00000621266 INTS1Q8N201 2190 aaKnown RBP7.89□□□□□ -1.15
COL4A6-210ENST00000621266 NUPR1O60356 82 aa7.89□□□□□ -1.15
COL4A6-210ENST00000621266 DEFB131AP59861 70 aa7.89□□□□□ -1.15
COL4A6-210ENST00000621266 HEATR1Q9H583 2144 aaKnown RBP7.89□□□□□ -1.15
COL4A6-210ENST00000621266 KIAA1671Q9BY89 1806 aa7.89□□□□□ -1.15
COL4A6-210ENST00000621266 PIP4P2Q8N4L2 257 aa7.89□□□□□ -1.15
COL4A6-210ENST00000621266 MDS2Q8NDY4 140 aa7.89□□□□□ -1.15
COL4A6-210ENST00000621266 TRBV19A0A075B6N1 114 aa7.89□□□□□ -1.15
COL4A6-210ENST00000621266 C8orf31Q8N9H6 132 aa7.89□□□□□ -1.15
COL4A6-210ENST00000621266 XCL2Q9UBD3 114 aa7.89□□□□□ -1.15
COL4A6-210ENST00000621266 ICOSQ9Y6W8 199 aa7.89□□□□□ -1.15
COL4A6-210ENST00000621266 V9GYY9 64 aa7.89□□□□□ -1.15
COL4A6-210ENST00000621266 RLFQ13129 1914 aa7.89□□□□□ -1.15
COL4A6-210ENST00000621266 SIP14410 1827 aa7.89□□□□□ -1.15
COL4A6-210ENST00000621266 LINC00173Q6ZV60 143 aa7.89□□□□□ -1.15
COL4A6-210ENST00000621266 GPR179Q6PRD1 2367 aa7.89□□□□□ -1.15
COL4A6-210ENST00000621266 TAX1BP3O14907 124 aa7.88□□□□□ -1.15
COL4A6-210ENST00000621266 FAM231DQ6ZW35 169 aa7.88□□□□□ -1.15
COL4A6-210ENST00000621266 TEN1Q86WV5 123 aa7.88□□□□□ -1.15
COL4A6-210ENST00000621266 GAFA1Q96PS6 74 aa7.88□□□□□ -1.15
COL4A6-210ENST00000621266 KIF26BQ2KJY2 2108 aa7.88□□□□□ -1.15
COL4A6-210ENST00000621266 CRYGBP07316 175 aa7.88□□□□□ -1.15
COL4A6-210ENST00000621266 OVOL3O00110 214 aa7.88□□□□□ -1.15
COL4A6-210ENST00000621266 VWA8A3KMH1 1905 aa7.88□□□□□ -1.15
COL4A6-210ENST00000621266 CACNA1GO43497 2377 aa7.88□□□□□ -1.15
COL4A6-210ENST00000621266 A0A096LPF7 62 aa7.88□□□□□ -1.15
COL4A6-210ENST00000621266 HERVK_113P63121 156 aa7.88□□□□□ -1.15
COL4A6-210ENST00000621266 Q9H8V8 135 aa7.88□□□□□ -1.15
COL4A6-210ENST00000621266 TRBV6-6A0A0A6YYG2 114 aa7.88□□□□□ -1.15
COL4A6-210ENST00000621266 FXYD2P54710 66 aa7.88□□□□□ -1.15
COL4A6-210ENST00000621266 SRSF2Q01130 221 aaKnown RBP7.88□□□□□ -1.15
COL4A6-210ENST00000621266 TEX36Q5VZQ5 186 aa7.87□□□□□ -1.15
COL4A6-210ENST00000621266 RUSC1-AS1Q66K80 236 aa7.87□□□□□ -1.15
COL4A6-210ENST00000621266 FAM223BA6NKX1 122 aa7.87□□□□□ -1.15
COL4A6-210ENST00000621266 WISP1O95388 367 aa7.87□□□□□ -1.15
COL4A6-210ENST00000621266 CMC4P56277 68 aaPredicted RBP7.87□□□□□ -1.15
COL4A6-210ENST00000621266 FAM223AQ8IWN6 122 aa7.87□□□□□ -1.15
COL4A6-210ENST00000621266 PRR25Q96S07 402 aa7.87□□□□□ -1.15
COL4A6-210ENST00000621266 BPESC1Q9GZL8 116 aa7.87□□□□□ -1.15
COL4A6-210ENST00000621266 TMEM178BH3BS89 294 aa7.87□□□□□ -1.15
COL4A6-210ENST00000621266 H3BUX3 64 aa7.87□□□□□ -1.15
COL4A6-210ENST00000621266 ANKRD39Q53RE8 183 aa7.87□□□□□ -1.15
COL4A6-210ENST00000621266 PLA2G2CQ5R387 149 aa7.87□□□□□ -1.15
COL4A6-210ENST00000621266 FAM120AOSQ5T036 256 aa7.87□□□□□ -1.15
COL4A6-210ENST00000621266 B4DSR2 109 aa7.87□□□□□ -1.15
COL4A6-210ENST00000621266 DYNAPQ8N1N2 210 aa7.87□□□□□ -1.15
COL4A6-210ENST00000621266 IGKV1D-17A0A075B6S4 117 aa7.86□□□□□ -1.15
COL4A6-210ENST00000621266 COL8A2P25067 703 aa7.86□□□□□ -1.15
COL4A6-210ENST00000621266 COX7B2Q8TF08 81 aa7.86□□□□□ -1.15
COL4A6-210ENST00000621266 MP68P56378 58 aa7.86□□□□□ -1.15
COL4A6-210ENST00000621266 IGKV1-6A0A0C4DH72 117 aa7.86□□□□□ -1.15
COL4A6-210ENST00000621266 IGKV1-39P01597 117 aa7.86□□□□□ -1.15
COL4A6-210ENST00000621266 IGKV1D-39P04432 117 aa7.86□□□□□ -1.15
COL4A6-210ENST00000621266 Q6ZS92 163 aa7.86□□□□□ -1.15
COL4A6-210ENST00000621266 KLHL30-AS1Q8NEE0 82 aa7.86□□□□□ -1.15
COL4A6-210ENST00000621266 RNF5Q99942 180 aa7.86□□□□□ -1.15
COL4A6-210ENST00000621266 FANCMQ8IYD8 2048 aa7.86□□□□□ -1.15
COL4A6-210ENST00000621266 IGFBPL1Q8WX77 278 aa7.86□□□□□ -1.15
COL4A6-210ENST00000621266 DAZ1Q9NQZ3 744 aaKnown RBP7.86□□□□□ -1.15
COL4A6-210ENST00000621266 F5H768 121 aa7.86□□□□□ -1.15
COL4A6-210ENST00000621266 LINC01620Q4KN68 170 aa7.86□□□□□ -1.15
COL4A6-210ENST00000621266 GATA4P43694 442 aa7.85□□□□□ -1.15
COL4A6-210ENST00000621266 LYPD2Q6UXB3 125 aa7.85□□□□□ -1.15
COL4A6-210ENST00000621266 PTH2Q96A98 100 aa7.85□□□□□ -1.15
COL4A6-210ENST00000621266 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.85□□□□□ -1.15
COL4A6-210ENST00000621266 IGKV2-29A2NJV5 120 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms