RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 C3orf79P0CE67 100 aa8.96□□□□□ -0.98
CLIP1-219ENST00000620786 LRRK1Q38SD2 2015 aa8.96□□□□□ -0.98
CLIP1-219ENST00000620786 CYYR1Q96J86 154 aa8.96□□□□□ -0.98
CLIP1-219ENST00000620786 UBE2CO00762 179 aa8.96□□□□□ -0.98
CLIP1-219ENST00000620786 MRPL51Q4U2R6 128 aaKnown RBP8.96□□□□□ -0.98
CLIP1-219ENST00000620786 BLCAPP62952 87 aa8.95□□□□□ -0.98
CLIP1-219ENST00000620786 CT83Q5H943 113 aa8.95□□□□□ -0.98
CLIP1-219ENST00000620786 A0A087X0K7 114 aa8.95□□□□□ -0.98
CLIP1-219ENST00000620786 GAGE2EQ4V326 116 aa8.95□□□□□ -0.98
CLIP1-219ENST00000620786 PRORYQ9H606 182 aa8.95□□□□□ -0.98
CLIP1-219ENST00000620786 GAGE2DQ9UEU5 116 aa8.95□□□□□ -0.98
CLIP1-219ENST00000620786 FAM231BA6NCW3 169 aa8.95□□□□□ -0.98
CLIP1-219ENST00000620786 COLCA2A8K830 154 aa8.95□□□□□ -0.98
CLIP1-219ENST00000620786 HLA-DMBP28068 263 aa8.95□□□□□ -0.98
CLIP1-219ENST00000620786 ZNF491Q8N8L2 437 aa8.95□□□□□ -0.98
CLIP1-219ENST00000620786 ZC2HC1AQ96GY0 325 aa8.95□□□□□ -0.98
CLIP1-219ENST00000620786 ANAPC1Q9H1A4 1944 aa8.95□□□□□ -0.98
CLIP1-219ENST00000620786 CACNA1GO43497 2377 aa8.95□□□□□ -0.98
CLIP1-219ENST00000620786 NDUFAF3Q9BU61 184 aa8.95□□□□□ -0.98
CLIP1-219ENST00000620786 NPBQ8NG41 125 aa8.95□□□□□ -0.98
CLIP1-219ENST00000620786 CNOT1A5YKK6 2376 aaKnown RBP8.94□□□□□ -0.98
CLIP1-219ENST00000620786 TP53BP1Q12888 1972 aaPredicted RBP8.94□□□□□ -0.98
CLIP1-219ENST00000620786 CCL18P55774 89 aa8.94□□□□□ -0.98
CLIP1-219ENST00000620786 C16orf74Q96GX8 76 aa8.94□□□□□ -0.98
CLIP1-219ENST00000620786 ICOSQ9Y6W8 199 aa8.94□□□□□ -0.98
CLIP1-219ENST00000620786 F8W735 103 aaPredicted RBP8.94□□□□□ -0.98
CLIP1-219ENST00000620786 FXYD5Q96DB9 178 aa8.94□□□□□ -0.98
CLIP1-219ENST00000620786 DOCK8Q8NF50 2099 aa8.94□□□□□ -0.98
CLIP1-219ENST00000620786 A0A1W2PNU3 283 aaPredicted RBP8.94□□□□□ -0.98
CLIP1-219ENST00000620786 GNRH2O43555 120 aa8.94□□□□□ -0.98
CLIP1-219ENST00000620786 SPART-AS1P0CW21 52 aa8.94□□□□□ -0.98
CLIP1-219ENST00000620786 IGLC7A0M8Q6 106 aa8.93□□□□□ -0.98
CLIP1-219ENST00000620786 IGLV3-1P01715 115 aa8.93□□□□□ -0.98
CLIP1-219ENST00000620786 XCL1P47992 114 aa8.93□□□□□ -0.98
CLIP1-219ENST00000620786 SRSF2Q01130 221 aaKnown RBP8.93□□□□□ -0.98
CLIP1-219ENST00000620786 RNASE13Q5GAN3 156 aaKnown RBP8.93□□□□□ -0.98
CLIP1-219ENST00000620786 AJUBAQ96IF1 538 aa8.93□□□□□ -0.98
CLIP1-219ENST00000620786 C17orf77Q96MU5 243 aa8.93□□□□□ -0.98
CLIP1-219ENST00000620786 PYGO2Q9BRQ0 406 aa8.93□□□□□ -0.98
CLIP1-219ENST00000620786 PRSS57Q6UWY2 283 aa8.93□□□□□ -0.98
CLIP1-219ENST00000620786 IGHV4OR15-8A0A075B7B6 117 aa8.93□□□□□ -0.98
CLIP1-219ENST00000620786 A0A087WW49 117 aa8.93□□□□□ -0.98
CLIP1-219ENST00000620786 IGHV7-81A0A0B4J1V7 117 aa8.93□□□□□ -0.98
CLIP1-219ENST00000620786 GAGE2AQ6NT46 116 aa8.93□□□□□ -0.98
CLIP1-219ENST00000620786 DYNAPQ8N1N2 210 aa8.93□□□□□ -0.98
CLIP1-219ENST00000620786 ZNF48Q96MX3 618 aaPredicted RBP8.93□□□□□ -0.98
CLIP1-219ENST00000620786 TRAV25A0A0B4J276 109 aa8.93□□□□□ -0.98
CLIP1-219ENST00000620786 SPINK8P0C7L1 97 aa8.92□□□□□ -0.98
CLIP1-219ENST00000620786 HERVK_113P63121 156 aa8.92□□□□□ -0.98
CLIP1-219ENST00000620786 WIPF2Q8TF74 440 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-219ENST00000620786 EDA2RQ9HAV5 297 aa8.92□□□□□ -0.98
CLIP1-219ENST00000620786 SCRT2Q9NQ03 307 aa8.92□□□□□ -0.98
CLIP1-219ENST00000620786 H3BMM0 161 aa8.92□□□□□ -0.98
CLIP1-219ENST00000620786 RPL18AQ02543 176 aaKnown RBP8.92□□□□□ -0.98
CLIP1-219ENST00000620786 TAL2Q16559 108 aa8.92□□□□□ -0.98
CLIP1-219ENST00000620786 STPG4Q8N801 248 aa8.92□□□□□ -0.98
CLIP1-219ENST00000620786 UBE2WQ96B02 151 aa8.92□□□□□ -0.98
CLIP1-219ENST00000620786 C1orf43Q9BWL3 253 aa8.92□□□□□ -0.98
CLIP1-219ENST00000620786 PKIGQ9Y2B9 76 aa8.92□□□□□ -0.98
CLIP1-219ENST00000620786 ACACAQ13085 2346 aa8.92□□□□□ -0.98
CLIP1-219ENST00000620786 RBMY1FQ15415 496 aaKnown RBP8.92□□□□□ -0.98
CLIP1-219ENST00000620786 C5orf56Q8N8D9 126 aa8.92□□□□□ -0.98
CLIP1-219ENST00000620786 ATP5G1P05496 136 aa8.92□□□□□ -0.98
CLIP1-219ENST00000620786 SUMO4Q6EEV6 95 aa8.92□□□□□ -0.98
CLIP1-219ENST00000620786 SPTBN2O15020 2390 aa8.91□□□□□ -0.98
CLIP1-219ENST00000620786 ZNF726P1Q15940 193 aa8.91□□□□□ -0.98
CLIP1-219ENST00000620786 POU2AF1Q16633 256 aa8.91□□□□□ -0.98
CLIP1-219ENST00000620786 RITA1Q96K30 269 aa8.91□□□□□ -0.98
CLIP1-219ENST00000620786 CLPSL1A2RUU4 121 aa8.91□□□□□ -0.98
CLIP1-219ENST00000620786 IGHV3-30P01768 117 aa8.91□□□□□ -0.98
CLIP1-219ENST00000620786 IGHV3-33P01772 117 aa8.91□□□□□ -0.98
CLIP1-219ENST00000620786 IGHV3-30-3P0DP02 117 aa8.91□□□□□ -0.98
CLIP1-219ENST00000620786 IGHV3-30-5P0DP03 117 aa8.91□□□□□ -0.98
CLIP1-219ENST00000620786 GYPEP15421 78 aa8.91□□□□□ -0.98
CLIP1-219ENST00000620786 MYCNOSP40205 109 aa8.91□□□□□ -0.98
CLIP1-219ENST00000620786 NCOR1O75376 2440 aa8.91□□□□□ -0.98
CLIP1-219ENST00000620786 ZFP36P26651 326 aaKnown RBP8.91□□□□□ -0.98
CLIP1-219ENST00000620786 CFHR4Q92496 578 aa8.91□□□□□ -0.98
CLIP1-219ENST00000620786 ASPHD1Q5U4P2 390 aa8.9□□□□□ -0.98
CLIP1-219ENST00000620786 KLK5Q9Y337 293 aaPredicted RBP8.9□□□□□ -0.98
CLIP1-219ENST00000620786 C4orf3Q8WVX3 66 aa8.9□□□□□ -0.98
CLIP1-219ENST00000620786 MRPL23Q16540 153 aaKnown RBP8.9□□□□□ -0.98
CLIP1-219ENST00000620786 KIF26AQ9ULI4 1882 aaPredicted RBP8.9□□□□□ -0.98
CLIP1-219ENST00000620786 SEM1Q6ZVN7 128 aa8.9□□□□□ -0.98
CLIP1-219ENST00000620786 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.9□□□□□ -0.99
CLIP1-219ENST00000620786 IGKV2-29A2NJV5 120 aaPredicted RBP8.9□□□□□ -0.99
CLIP1-219ENST00000620786 KIR3DS1Q14943 382 aa8.9□□□□□ -0.99
CLIP1-219ENST00000620786 RSPO3Q9BXY4 272 aaPredicted RBP8.9□□□□□ -0.99
CLIP1-219ENST00000620786 NDUFA12Q9UI09 145 aa8.9□□□□□ -0.99
CLIP1-219ENST00000620786 CACNA1DQ01668 2161 aa8.9□□□□□ -0.99
CLIP1-219ENST00000620786 SMIM27A0A1W2PRY6 76 aa8.89□□□□□ -0.99
CLIP1-219ENST00000620786 RBAKDNA6NC62 111 aa8.89□□□□□ -0.99
CLIP1-219ENST00000620786 SMIM2Q9BVW6 85 aa8.89□□□□□ -0.99
CLIP1-219ENST00000620786 ANAPC13Q9BS18 74 aa8.89□□□□□ -0.99
CLIP1-219ENST00000620786 AGPAT4-IT1Q9H0P7 198 aa8.89□□□□□ -0.99
CLIP1-219ENST00000620786 K7EQD1 137 aa8.89□□□□□ -0.99
CLIP1-219ENST00000620786 C18orf32Q8TCD1 76 aa8.89□□□□□ -0.99
CLIP1-219ENST00000620786 ESM1Q9NQ30 184 aa8.89□□□□□ -0.99
CLIP1-219ENST00000620786 SMAD5-AS1Q9Y6J3 95 aa8.89□□□□□ -0.99
CLIP1-219ENST00000620786 GVINP1Q7Z2Y8 2422 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms