RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 FBLL1A6NHQ2 334 aaKnown RBP11.82□□□□□ -0.52
CD40-207ENST00000620709 SOCS3O14543 225 aa11.82□□□□□ -0.52
CD40-207ENST00000620709 LY6G6CO95867 125 aa11.82□□□□□ -0.52
CD40-207ENST00000620709 LTAP01374 205 aa11.82□□□□□ -0.52
CD40-207ENST00000620709 IGLV2-8P01709 118 aa11.82□□□□□ -0.52
CD40-207ENST00000620709 CMC4P56277 68 aaPredicted RBP11.82□□□□□ -0.52
CD40-207ENST00000620709 FLI1Q01543 452 aaPredicted RBP11.82□□□□□ -0.52
CD40-207ENST00000620709 PSG3Q16557 428 aa11.82□□□□□ -0.52
CD40-207ENST00000620709 RNF182Q8N6D2 247 aa11.82□□□□□ -0.52
CD40-207ENST00000620709 SGK494Q96LW2 274 aa11.82□□□□□ -0.52
CD40-207ENST00000620709 TRAV8-1A0A0A6YYK1 113 aa11.81□□□□□ -0.52
CD40-207ENST00000620709 K7EN84 100 aa11.81□□□□□ -0.52
CD40-207ENST00000620709 IGLV2-11P01706 119 aa11.81□□□□□ -0.52
CD40-207ENST00000620709 ANAPC16Q96DE5 110 aa11.81□□□□□ -0.52
CD40-207ENST00000620709 CSTL1Q9H114 145 aa11.81□□□□□ -0.52
CD40-207ENST00000620709 TMEM242Q9NWH2 141 aa11.81□□□□□ -0.52
CD40-207ENST00000620709 IGKV2-40A0A087WW87 121 aaPredicted RBP11.81□□□□□ -0.52
CD40-207ENST00000620709 PPP1R2P9O14990 202 aa11.81□□□□□ -0.52
CD40-207ENST00000620709 GCGP01275 180 aa11.81□□□□□ -0.52
CD40-207ENST00000620709 IGKV2D-40P01614 121 aaPredicted RBP11.81□□□□□ -0.52
CD40-207ENST00000620709 MGST1P10620 155 aaKnown RBP11.81□□□□□ -0.52
CD40-207ENST00000620709 PRNTQ86SH4 94 aa11.81□□□□□ -0.52
CD40-207ENST00000620709 SFRP2Q96HF1 295 aa11.81□□□□□ -0.52
CD40-207ENST00000620709 PSG8Q9UQ74 426 aa11.81□□□□□ -0.52
CD40-207ENST00000620709 RBAKDNA6NC62 111 aa11.8□□□□□ -0.52
CD40-207ENST00000620709 NUPR2A6NF83 97 aa11.8□□□□□ -0.52
CD40-207ENST00000620709 ZNF705FA8MVS1 300 aaPredicted RBP11.8□□□□□ -0.52
CD40-207ENST00000620709 H7BYZ3 331 aa11.8□□□□□ -0.52
CD40-207ENST00000620709 ID1P41134 155 aa11.8□□□□□ -0.52
CD40-207ENST00000620709 NHLRC2Q8NBF2 726 aa11.8□□□□□ -0.52
CD40-207ENST00000620709 MS4A6AQ9H2W1 248 aa11.8□□□□□ -0.52
CD40-207ENST00000620709 BIN3Q9NQY0 253 aa11.8□□□□□ -0.52
CD40-207ENST00000620709 ZFP30Q9Y2G7 519 aa11.8□□□□□ -0.52
CD40-207ENST00000620709 OR5I1Q13606 314 aa11.79□□□□□ -0.52
CD40-207ENST00000620709 CEMP1Q6PRD7 247 aaPredicted RBP11.79□□□□□ -0.52
CD40-207ENST00000620709 TMEM183AQ8IXX5 376 aa11.79□□□□□ -0.52
CD40-207ENST00000620709 ZNF738Q8NE65 137 aa11.79□□□□□ -0.52
CD40-207ENST00000620709 DCANP1Q8TF63 244 aa11.79□□□□□ -0.52
CD40-207ENST00000620709 LINC00476Q8WZB0 136 aa11.79□□□□□ -0.52
CD40-207ENST00000620709 MLST8Q9BVC4 326 aa11.79□□□□□ -0.52
CD40-207ENST00000620709 DEFB131AP59861 70 aa11.78□□□□□ -0.52
CD40-207ENST00000620709 ERVFC1-1P60608 527 aa11.78□□□□□ -0.52
CD40-207ENST00000620709 C15orf54Q8N8G6 183 aa11.78□□□□□ -0.52
CD40-207ENST00000620709 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.78□□□□□ -0.52
CD40-207ENST00000620709 OR10G8Q8NGN5 311 aa11.78□□□□□ -0.52
CD40-207ENST00000620709 C20orf173Q96LM9 149 aa11.78□□□□□ -0.52
CD40-207ENST00000620709 KLK5Q9Y337 293 aaPredicted RBP11.78□□□□□ -0.52
CD40-207ENST00000620709 PRAC2D3DTV9 90 aa11.77□□□□□ -0.52
CD40-207ENST00000620709 CA1P00915 261 aaPredicted RBP11.77□□□□□ -0.52
CD40-207ENST00000620709 PRB4P10163 310 aaPredicted RBP11.77□□□□□ -0.52
CD40-207ENST00000620709 FAM24BQ8N5W8 94 aa11.77□□□□□ -0.52
CD40-207ENST00000620709 OSTCQ9NRP0 149 aa11.77□□□□□ -0.52
CD40-207ENST00000620709 K7EQG2 157 aa11.76□□□□□ -0.53
CD40-207ENST00000620709 IBA57Q5T440 356 aaKnown RBP11.76□□□□□ -0.53
CD40-207ENST00000620709 OR11H2Q8NH07 326 aa11.76□□□□□ -0.53
CD40-207ENST00000620709 VGLL1Q99990 258 aa11.76□□□□□ -0.53
CD40-207ENST00000620709 TRAV2A0A0B4J234 112 aa11.76□□□□□ -0.53
CD40-207ENST00000620709 SNRPD3P62318 126 aaKnown RBP11.76□□□□□ -0.53
CD40-207ENST00000620709 SAPCD1Q5SSQ6 148 aa11.76□□□□□ -0.53
CD40-207ENST00000620709 TMEM78Q5T7P6 136 aa11.76□□□□□ -0.53
CD40-207ENST00000620709 PRR27Q6MZM9 219 aa11.76□□□□□ -0.53
CD40-207ENST00000620709 FAM231DQ6ZW35 169 aa11.76□□□□□ -0.53
CD40-207ENST00000620709 NDFIP1Q9BT67 221 aa11.76□□□□□ -0.53
CD40-207ENST00000620709 ZNF492Q9P255 531 aa11.76□□□□□ -0.53
CD40-207ENST00000620709 DEFB4AO15263 64 aa11.75□□□□□ -0.53
CD40-207ENST00000620709 C9orf47Q6ZRZ4 202 aa11.75□□□□□ -0.53
CD40-207ENST00000620709 STHQ8IWL8 128 aa11.75□□□□□ -0.53
CD40-207ENST00000620709 PHLDA1Q8WV24 401 aaPredicted RBP11.75□□□□□ -0.53
CD40-207ENST00000620709 RNASE7Q9H1E1 156 aaKnown RBP11.75□□□□□ -0.53
CD40-207ENST00000620709 CT45A10P0DMU9 189 aa11.74□□□□□ -0.53
CD40-207ENST00000620709 S100PP25815 95 aa11.74□□□□□ -0.53
CD40-207ENST00000620709 ERCC8Q13216 396 aa11.74□□□□□ -0.53
CD40-207ENST00000620709 OR10J6PQ8NGY7 276 aa11.74□□□□□ -0.53
CD40-207ENST00000620709 Q8TAT8 98 aa11.74□□□□□ -0.53
CD40-207ENST00000620709 URGCP-MRPS24S4R325 110 aa11.74□□□□□ -0.53
CD40-207ENST00000620709 ZNF138P52744 262 aa11.73□□□□□ -0.53
CD40-207ENST00000620709 NANOS2P60321 138 aaKnown RBP11.73□□□□□ -0.53
CD40-207ENST00000620709 KCNIP4Q6PIL6 250 aa11.73□□□□□ -0.53
CD40-207ENST00000620709 COX8CQ7Z4L0 72 aa11.73□□□□□ -0.53
CD40-207ENST00000620709 C11orf45Q8TAV5 145 aa11.73□□□□□ -0.53
CD40-207ENST00000620709 DAZAP1Q96EP5 407 aaKnown RBP11.73□□□□□ -0.53
CD40-207ENST00000620709 ZC2HC1AQ96GY0 325 aa11.73□□□□□ -0.53
CD40-207ENST00000620709 IMMP2LQ96T52 175 aa11.73□□□□□ -0.53
CD40-207ENST00000620709 AGPAT4-IT1Q9H0P7 198 aa11.73□□□□□ -0.53
CD40-207ENST00000620709 PPP1R14DQ9NXH3 145 aa11.73□□□□□ -0.53
CD40-207ENST00000620709 V9GYV3 84 aa11.73□□□□□ -0.53
CD40-207ENST00000620709 ZNF705GA8MUZ8 300 aaPredicted RBP11.72□□□□□ -0.53
CD40-207ENST00000620709 GATCO43716 136 aaKnown RBP11.72□□□□□ -0.53
CD40-207ENST00000620709 ZNF688P0C7X2 276 aa11.72□□□□□ -0.53
CD40-207ENST00000620709 ELOBQ15370 118 aa11.72□□□□□ -0.53
CD40-207ENST00000620709 C8orf49Q96NF6 230 aa11.72□□□□□ -0.53
CD40-207ENST00000620709 YPEL4Q96NS1 127 aa11.72□□□□□ -0.53
CD40-207ENST00000620709 C19orf71A6NCJ1 209 aa11.71□□□□□ -0.53
CD40-207ENST00000620709 KNCNA6PVL3 124 aa11.71□□□□□ -0.53
CD40-207ENST00000620709 COLCA2A8K830 154 aa11.71□□□□□ -0.53
CD40-207ENST00000620709 NPIPB6E9PJ23 425 aa11.71□□□□□ -0.53
CD40-207ENST00000620709 P01737 135 aa11.71□□□□□ -0.53
CD40-207ENST00000620709 PSMG4Q5JS54 123 aa11.71□□□□□ -0.53
CD40-207ENST00000620709 NUDT10Q8NFP7 164 aa11.71□□□□□ -0.53
CD40-207ENST00000620709 OR8A1Q8NGG7 326 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms