RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 RBMY1EA6NEQ0 496 aaKnown RBP4.01□□□□□ -1.77
VPS13D-214ENST00000620676 RBMY1DP0C7P1 496 aaKnown RBP4.01□□□□□ -1.77
VPS13D-214ENST00000620676 RBMY1A1P0DJD3 496 aaKnown RBP4.01□□□□□ -1.77
VPS13D-214ENST00000620676 RBMY1CP0DJD4 496 aa4.01□□□□□ -1.77
VPS13D-214ENST00000620676 TRAV25A0A0B4J276 109 aa4.01□□□□□ -1.77
VPS13D-214ENST00000620676 TMEM200BQ69YZ2 307 aa4.01□□□□□ -1.77
VPS13D-214ENST00000620676 WFDC9Q8NEX5 89 aa4.01□□□□□ -1.77
VPS13D-214ENST00000620676 DOPEY1Q5JWR5 2465 aa4□□□□□ -1.77
VPS13D-214ENST00000620676 FER1L5A0AVI2 2057 aa4□□□□□ -1.77
VPS13D-214ENST00000620676 CFPP27918 469 aa4□□□□□ -1.77
VPS13D-214ENST00000620676 RBMY1FQ15415 496 aaKnown RBP4□□□□□ -1.77
VPS13D-214ENST00000620676 TMEM42Q69YG0 159 aa4□□□□□ -1.77
VPS13D-214ENST00000620676 LINC00322Q6ZN03 302 aaPredicted RBP4□□□□□ -1.77
VPS13D-214ENST00000620676 Q9HAA7 133 aa4□□□□□ -1.77
VPS13D-214ENST00000620676 E9PLD3 99 aa4□□□□□ -1.77
VPS13D-214ENST00000620676 GNRH2O43555 120 aa4□□□□□ -1.77
VPS13D-214ENST00000620676 DIAPH2-AS1Q14236 149 aa4□□□□□ -1.77
VPS13D-214ENST00000620676 AJUBAQ96IF1 538 aa4□□□□□ -1.77
VPS13D-214ENST00000620676 RLFQ13129 1914 aa4□□□□□ -1.77
VPS13D-214ENST00000620676 UCNP55089 124 aa4□□□□□ -1.77
VPS13D-214ENST00000620676 C1orf162Q8NEQ5 155 aaPredicted RBP4□□□□□ -1.77
VPS13D-214ENST00000620676 SNURFQ9Y675 71 aa4□□□□□ -1.77
VPS13D-214ENST00000620676 GPR179Q6PRD1 2367 aa4□□□□□ -1.77
VPS13D-214ENST00000620676 DSCAML1Q8TD84 2053 aa4□□□□□ -1.77
VPS13D-214ENST00000620676 CLPSL1A2RUU4 121 aa4□□□□□ -1.77
VPS13D-214ENST00000620676 DYNLRB2Q8TF09 96 aa4□□□□□ -1.77
VPS13D-214ENST00000620676 NTN3O00634 580 aaPredicted RBP4□□□□□ -1.77
VPS13D-214ENST00000620676 PAPPA-AS1Q5QFB9 102 aa4□□□□□ -1.77
VPS13D-214ENST00000620676 LINC01560Q8TB33 94 aa4□□□□□ -1.77
VPS13D-214ENST00000620676 INS-IGF2F8WCM5 200 aa4□□□□□ -1.77
VPS13D-214ENST00000620676 ODF1Q14990 250 aa4□□□□□ -1.77
VPS13D-214ENST00000620676 A0A0B4J2C4 111 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 TRGV9Q99603 122 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 SHANK2-AS3Q9BTD1 123 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 IGLV2-14P01704 120 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 SPRNQ5BIV9 151 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 KLK9Q9UKQ9 250 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 FAM90A9PA6NNJ1 464 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 TM4SF4P48230 202 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 IGKV1D-17A0A075B6S4 117 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 SOCS3O14543 225 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 CRYGBP07316 175 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 RHOHQ15669 191 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 ZNF503-AS2A6NEH8 195 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 CRPP02741 224 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 PFN2P35080 140 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 RPL36AP83881 106 aaKnown RBP3.99□□□□□ -1.77
VPS13D-214ENST00000620676 RPL36ALQ969Q0 106 aaKnown RBP3.99□□□□□ -1.77
VPS13D-214ENST00000620676 C11orf52Q96A22 123 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 PATJQ8NI35 1801 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 C2CD3Q4AC94 2353 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 C15orf32Q32M92 178 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 SPANXA1Q9NS26 97 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 A0A0G2JMZ2 1700 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 LRRC37A2A6NM11 1700 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 LRRC37AA6NMS7 1700 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 TMEM219Q86XT9 240 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 IGHG2P01859 326 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 TEX36Q5VZQ5 186 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 C11orf1Q9H5F2 150 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 ICOSQ9Y6W8 199 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 FAM90A1Q86YD7 464 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 ZSWIM8A7E2V4 1837 aa3.99□□□□□ -1.77
VPS13D-214ENST00000620676 MRPS12O15235 138 aaKnown RBP3.98□□□□□ -1.77
VPS13D-214ENST00000620676 EGR2P11161 476 aaPredicted RBP3.98□□□□□ -1.77
VPS13D-214ENST00000620676 GGNQ86UU5 652 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 KIAA1549Q9HCM3 1950 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 C4orf26Q17RF5 130 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 TMEM30BQ3MIR4 351 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 NDUFC2O95298 119 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 COL18A1P39060 1754 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 TRGV11A0A075B6L2 103 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 CENPVL3A0A0U1RRI6 287 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 RPL39P62891 51 aaKnown RBP3.98□□□□□ -1.77
VPS13D-214ENST00000620676 SUMO4Q6EEV6 95 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 FAM110AQ9BQ89 295 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 UTF1Q5T230 341 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 C14orf132Q9NPU4 83 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.98□□□□□ -1.77
VPS13D-214ENST00000620676 IGKV2-29A2NJV5 120 aaPredicted RBP3.98□□□□□ -1.77
VPS13D-214ENST00000620676 EPOPA6NHQ4 379 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 CRLF1O75462 422 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 INSP01308 110 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 BSPH1Q075Z2 132 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 LINC01620Q4KN68 170 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 COL4A5P29400 1685 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 SNRPD3P62318 126 aaKnown RBP3.98□□□□□ -1.77
VPS13D-214ENST00000620676 POU2AF1Q16633 256 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 ABCA2Q9BZC7 2435 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 NDUFA11Q86Y39 141 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 A0A1W2PRX2 142 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 WT1-ASQ06250 92 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 C16orf97H3BN30 126 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 JPT2Q9H910 190 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 TNCP24821 2201 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 MALP21145 153 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 FAM19A5Q7Z5A7 132 aaPredicted RBP3.98□□□□□ -1.77
VPS13D-214ENST00000620676 F5H768 121 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 TMEM14BQ9NUH8 114 aa3.98□□□□□ -1.77
VPS13D-214ENST00000620676 PEMTQ9UBM1 199 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms