RNA–Protein interactions for RNA: ENST00000618440.1

U6.42-201, humanhuman

BASIC

Gene U6, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U6.42-201ENST00000618440 PTPRGP23470 1445 aa0.27□□□□□ -2.37
U6.42-201ENST00000618440 LRP5O75197 1615 aa0.27□□□□□ -2.37
U6.42-201ENST00000618440 RREB1Q92766 1687 aa0.27□□□□□ -2.37
U6.42-201ENST00000618440 NAV3Q8IVL0 2385 aa0.26□□□□□ -2.37
U6.42-201ENST00000618440 NBDYA0A0U1RRE5 68 aa0.26□□□□□ -2.37
U6.42-201ENST00000618440 C5orf58C9J3I9 102 aa0.26□□□□□ -2.37
U6.42-201ENST00000618440 PFDN1O60925 122 aa0.26□□□□□ -2.37
U6.42-201ENST00000618440 CRYGSP22914 178 aa0.26□□□□□ -2.37
U6.42-201ENST00000618440 ZNF137PP52743 207 aa0.26□□□□□ -2.37
U6.42-201ENST00000618440 CCSMST1Q4G0I0 132 aa0.26□□□□□ -2.37
U6.42-201ENST00000618440 Q6ZS92 163 aa0.26□□□□□ -2.37
U6.42-201ENST00000618440 Q86TA4 180 aa0.26□□□□□ -2.37
U6.42-201ENST00000618440 LXNQ9BS40 222 aa0.26□□□□□ -2.37
U6.42-201ENST00000618440 V9GYQ6 96 aa0.26□□□□□ -2.37
U6.42-201ENST00000618440 MUC5BQ9HC84 5762 aaPredicted RBP0.25□□□□□ -2.37
U6.42-201ENST00000618440 ASH1LQ9NR48 2969 aaKnown RBP0.25□□□□□ -2.37
U6.42-201ENST00000618440 CDK12Q9NYV4 1490 aaPredicted RBP0.25□□□□□ -2.37
U6.42-201ENST00000618440 DSPPQ9NZW4 1301 aa0.25□□□□□ -2.37
U6.42-201ENST00000618440 LOC107986453A0A1B0GWG9 222 aa0.25□□□□□ -2.37
U6.42-201ENST00000618440 PGRMC1O00264 195 aaKnown RBP0.25□□□□□ -2.37
U6.42-201ENST00000618440 SRP9P49458 86 aaKnown RBP0.25□□□□□ -2.37
U6.42-201ENST00000618440 C6orf52Q5T4I8 152 aa0.25□□□□□ -2.37
U6.42-201ENST00000618440 XAF1Q6GPH4 301 aa0.25□□□□□ -2.37
U6.42-201ENST00000618440 TCTEX1D1Q8N7M0 179 aa0.25□□□□□ -2.37
U6.42-201ENST00000618440 C5orf17Q8NAS9 161 aa0.25□□□□□ -2.37
U6.42-201ENST00000618440 GRPEL2Q8TAA5 225 aa0.25□□□□□ -2.37
U6.42-201ENST00000618440 CCDC115Q96NT0 180 aa0.25□□□□□ -2.37
U6.42-201ENST00000618440 TRAPPC2LQ9UL33 140 aa0.25□□□□□ -2.37
U6.42-201ENST00000618440 NINQ8N4C6 2090 aa0.25□□□□□ -2.37
U6.42-201ENST00000618440 MED23Q9ULK4 1368 aa0.24□□□□□ -2.37
U6.42-201ENST00000618440 H3BMG7 143 aa0.24□□□□□ -2.37
U6.42-201ENST00000618440 IGF2P01344 180 aa0.24□□□□□ -2.37
U6.42-201ENST00000618440 GYPBP06028 91 aa0.24□□□□□ -2.37
U6.42-201ENST00000618440 SLC25A4P12235 298 aa0.24□□□□□ -2.37
U6.42-201ENST00000618440 CAV3P56539 151 aa0.24□□□□□ -2.37
U6.42-201ENST00000618440 TMEM128Q5BJH2 165 aa0.24□□□□□ -2.37
U6.42-201ENST00000618440 GLYATL3Q5SZD4 288 aa0.24□□□□□ -2.37
U6.42-201ENST00000618440 SAMD13Q5VXD3 122 aa0.24□□□□□ -2.37
U6.42-201ENST00000618440 Q5XG85 94 aa0.24□□□□□ -2.37
U6.42-201ENST00000618440 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.24□□□□□ -2.37
U6.42-201ENST00000618440 OR5A2Q8NGI9 324 aa0.24□□□□□ -2.37
U6.42-201ENST00000618440 OR9Q1Q8NGQ5 310 aa0.24□□□□□ -2.37
U6.42-201ENST00000618440 C19orf12Q9NSK7 152 aa0.24□□□□□ -2.37
U6.42-201ENST00000618440 MRPL35Q9NZE8 188 aaKnown RBP0.24□□□□□ -2.37
U6.42-201ENST00000618440 JPT1Q9UK76 154 aa0.24□□□□□ -2.37
U6.42-201ENST00000618440 HELZP42694 1942 aaKnown RBP0.24□□□□□ -2.37
U6.42-201ENST00000618440 ARHGAP31Q2M1Z3 1444 aa0.23□□□□□ -2.37
U6.42-201ENST00000618440 VIRMAQ69YN4 1812 aaKnown RBP0.23□□□□□ -2.37
U6.42-201ENST00000618440 A0A1W2PPB8 328 aa0.23□□□□□ -2.37
U6.42-201ENST00000618440 A0A1W2PRS3 328 aa0.23□□□□□ -2.37
U6.42-201ENST00000618440 ARL5CA6NH57 179 aa0.23□□□□□ -2.37
U6.42-201ENST00000618440 KIR3DP1A8MWS1 328 aa0.23□□□□□ -2.37
U6.42-201ENST00000618440 M0QZK8 103 aa0.23□□□□□ -2.37
U6.42-201ENST00000618440 LY6G6CO95867 125 aa0.23□□□□□ -2.37
U6.42-201ENST00000618440 IFNA21P01568 189 aa0.23□□□□□ -2.37
U6.42-201ENST00000618440 RPL22P35268 128 aaKnown RBP0.23□□□□□ -2.37
U6.42-201ENST00000618440 DNAJB13P59910 316 aa0.23□□□□□ -2.37
U6.42-201ENST00000618440 QRFPP83859 136 aa0.23□□□□□ -2.37
U6.42-201ENST00000618440 FXYD3Q14802 87 aa0.23□□□□□ -2.37
U6.42-201ENST00000618440 C3orf62Q6ZUJ4 267 aa0.23□□□□□ -2.37
U6.42-201ENST00000618440 TMEM229BQ8NBD8 167 aa0.23□□□□□ -2.37
U6.42-201ENST00000618440 BRK1Q8WUW1 75 aa0.23□□□□□ -2.37
U6.42-201ENST00000618440 AP1S3Q96PC3 154 aa0.23□□□□□ -2.37
U6.42-201ENST00000618440 NDUFAF1Q9Y375 327 aa0.23□□□□□ -2.37
U6.42-201ENST00000618440 ESPL1Q14674 2120 aa0.23□□□□□ -2.37
U6.42-201ENST00000618440 OVOS2A0A0G2JMS6 1433 aa0.22□□□□□ -2.37
U6.42-201ENST00000618440 RBBP6Q7Z6E9 1792 aaKnown RBP0.22□□□□□ -2.37
U6.42-201ENST00000618440 ZNF142P52746 1687 aaPredicted RBP0.22□□□□□ -2.37
U6.42-201ENST00000618440 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.22□□□□□ -2.37
U6.42-201ENST00000618440 IFITM5A6NNB3 132 aa0.22□□□□□ -2.37
U6.42-201ENST00000618440 SULT1C4O75897 302 aa0.22□□□□□ -2.37
U6.42-201ENST00000618440 HBDP02042 147 aa0.22□□□□□ -2.37
U6.42-201ENST00000618440 EVI2AP22794 236 aa0.22□□□□□ -2.37
U6.42-201ENST00000618440 RPL37P61927 97 aaKnown RBP0.22□□□□□ -2.37
U6.42-201ENST00000618440 BLCAPP62952 87 aa0.22□□□□□ -2.37
U6.42-201ENST00000618440 ASB16-AS1Q495Z4 193 aa0.22□□□□□ -2.37
U6.42-201ENST00000618440 C5orf56Q8N8D9 126 aa0.22□□□□□ -2.37
U6.42-201ENST00000618440 ZCCHC6Q5VYS8 1495 aaKnown RBP0.22□□□□□ -2.37
U6.42-201ENST00000618440 TANC1Q9C0D5 1861 aa0.21□□□□□ -2.38
U6.42-201ENST00000618440 EDF1O60869 148 aaKnown RBP0.21□□□□□ -2.38
U6.42-201ENST00000618440 NBEAP1P0C6P0 100 aa0.21□□□□□ -2.38
U6.42-201ENST00000618440 SPINK7P58062 85 aa0.21□□□□□ -2.38
U6.42-201ENST00000618440 FXYD6P3P58550 94 aa0.21□□□□□ -2.38
U6.42-201ENST00000618440 OTOSQ8NHW6 89 aa0.21□□□□□ -2.38
U6.42-201ENST00000618440 LINC00208Q96KT6 92 aa0.21□□□□□ -2.38
U6.42-201ENST00000618440 COMMD3Q9UBI1 195 aa0.21□□□□□ -2.38
U6.42-201ENST00000618440 TNCP24821 2201 aa0.21□□□□□ -2.38
U6.42-201ENST00000618440 BLMP54132 1417 aaPredicted RBP0.21□□□□□ -2.38
U6.42-201ENST00000618440 LOC107984156A0A0G2JMH3 177 aa0.2□□□□□ -2.38
U6.42-201ENST00000618440 LOC101927531A0A1B0GV80 90 aa0.2□□□□□ -2.38
U6.42-201ENST00000618440 BBIP1A8MTZ0 92 aa0.2□□□□□ -2.38
U6.42-201ENST00000618440 CDC42EP2O14613 210 aa0.2□□□□□ -2.38
U6.42-201ENST00000618440 UQCRQO14949 82 aa0.2□□□□□ -2.38
U6.42-201ENST00000618440 SLC25A5P05141 298 aaKnown RBP0.2□□□□□ -2.38
U6.42-201ENST00000618440 NEFHP12036 1026 aa0.2□□□□□ -2.38
U6.42-201ENST00000618440 ETV6P41212 452 aa0.2□□□□□ -2.38
U6.42-201ENST00000618440 GTF2A1P52655 376 aaPredicted RBP0.2□□□□□ -2.38
U6.42-201ENST00000618440 B2MP61769 119 aa0.2□□□□□ -2.38
U6.42-201ENST00000618440 SNRPD3P62318 126 aaKnown RBP0.2□□□□□ -2.38
U6.42-201ENST00000618440 SMIM15Q7Z3B0 74 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms