RNA–Protein interactions for RNA: ENST00000618361.4

CBWD1-227, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-227ENST00000618361 PRRT1Q99946 306 aa5.11□□□□□ -1.59
CBWD1-227ENST00000618361 KRTAP9-2Q9BYQ4 174 aa5.11□□□□□ -1.59
CBWD1-227ENST00000618361 NAA50Q9GZZ1 169 aaKnown RBP5.11□□□□□ -1.59
CBWD1-227ENST00000618361 MCUBQ9NWR8 336 aa5.11□□□□□ -1.59
CBWD1-227ENST00000618361 TRAV8-3A0A0A6YYJ7 113 aa5.1□□□□□ -1.59
CBWD1-227ENST00000618361 KRTAP9-6A0A140TA67 174 aa5.1□□□□□ -1.59
CBWD1-227ENST00000618361 FNDC10F2Z333 226 aa5.1□□□□□ -1.59
CBWD1-227ENST00000618361 F8W036 122 aa5.1□□□□□ -1.59
CBWD1-227ENST00000618361 SYNGR2O43760 224 aa5.1□□□□□ -1.59
CBWD1-227ENST00000618361 ZNF253O75346 499 aa5.1□□□□□ -1.59
CBWD1-227ENST00000618361 IGLC2P0DOY2 106 aa5.1□□□□□ -1.59
CBWD1-227ENST00000618361 INPP1P49441 399 aa5.1□□□□□ -1.59
CBWD1-227ENST00000618361 PPT1P50897 306 aa5.1□□□□□ -1.59
CBWD1-227ENST00000618361 RAB4BP61018 213 aa5.1□□□□□ -1.59
CBWD1-227ENST00000618361 MRPS10P82664 201 aaKnown RBP5.1□□□□□ -1.59
CBWD1-227ENST00000618361 BTN1A1Q13410 526 aa5.1□□□□□ -1.59
CBWD1-227ENST00000618361 BAK1Q16611 211 aa5.1□□□□□ -1.59
CBWD1-227ENST00000618361 SPANXN5Q5MJ07 72 aa5.1□□□□□ -1.59
CBWD1-227ENST00000618361 LINC00305Q7Z4B0 112 aa5.1□□□□□ -1.59
CBWD1-227ENST00000618361 COMMD7Q86VX2 200 aa5.1□□□□□ -1.59
CBWD1-227ENST00000618361 Q8N976 141 aa5.1□□□□□ -1.59
CBWD1-227ENST00000618361 YIPF6Q96EC8 236 aa5.1□□□□□ -1.59
CBWD1-227ENST00000618361 ZNF479Q96JC4 524 aa5.1□□□□□ -1.59
CBWD1-227ENST00000618361 PAXXQ9BUH6 204 aa5.1□□□□□ -1.59
CBWD1-227ENST00000618361 ARL6Q9H0F7 186 aa5.1□□□□□ -1.59
CBWD1-227ENST00000618361 BIN3Q9NQY0 253 aa5.1□□□□□ -1.59
CBWD1-227ENST00000618361 PRR13Q9NZ81 148 aa5.1□□□□□ -1.59
CBWD1-227ENST00000618361 STRAPQ9Y3F4 350 aaKnown RBP5.1□□□□□ -1.59
CBWD1-227ENST00000618361 COX11Q9Y6N1 276 aa5.1□□□□□ -1.59
CBWD1-227ENST00000618361 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.09□□□□□ -1.59
CBWD1-227ENST00000618361 IGHV1OR15-1A0A075B7D0 117 aa5.09□□□□□ -1.59
CBWD1-227ENST00000618361 SLC17A3O00476 420 aa5.09□□□□□ -1.59
CBWD1-227ENST00000618361 PFN1P07737 140 aaKnown RBP5.09□□□□□ -1.59
CBWD1-227ENST00000618361 OR4E1P0C645 316 aa5.09□□□□□ -1.59
CBWD1-227ENST00000618361 HNRNPA3P51991 378 aaKnown RBP5.09□□□□□ -1.59
CBWD1-227ENST00000618361 OPCMLQ14982 345 aa5.09□□□□□ -1.59
CBWD1-227ENST00000618361 FAAP20Q6NZ36 180 aa5.09□□□□□ -1.59
CBWD1-227ENST00000618361 MZT2AQ6P582 158 aa5.09□□□□□ -1.59
CBWD1-227ENST00000618361 HSD17B11Q8NBQ5 300 aa5.09□□□□□ -1.59
CBWD1-227ENST00000618361 OR10P1Q8NGE3 313 aa5.09□□□□□ -1.59
CBWD1-227ENST00000618361 C12orf57Q99622 126 aa5.09□□□□□ -1.59
CBWD1-227ENST00000618361 SPXQ9BT56 116 aa5.09□□□□□ -1.59
CBWD1-227ENST00000618361 SLIRPQ9GZT3 109 aaKnown RBP5.09□□□□□ -1.59
CBWD1-227ENST00000618361 NPVFQ9HCQ7 196 aa5.09□□□□□ -1.59
CBWD1-227ENST00000618361 MED9Q9NWA0 146 aa5.09□□□□□ -1.59
CBWD1-227ENST00000618361 EXTL2Q9UBQ6 330 aa5.09□□□□□ -1.59
CBWD1-227ENST00000618361 TP53TG3Q9ULZ0 132 aa5.09□□□□□ -1.59
CBWD1-227ENST00000618361 CBY1Q9Y3M2 126 aa5.09□□□□□ -1.59
CBWD1-227ENST00000618361 PKHD1L1Q86WI1 4243 aa5.09□□□□□ -1.59
CBWD1-227ENST00000618361 TRAV4A0A0B4J268 109 aa5.08□□□□□ -1.6
CBWD1-227ENST00000618361 SCO2A0A1W2PP80 73 aa5.08□□□□□ -1.6
CBWD1-227ENST00000618361 SMCO3A2RU48 225 aa5.08□□□□□ -1.6
CBWD1-227ENST00000618361 RNF222A6NCQ9 220 aa5.08□□□□□ -1.6
CBWD1-227ENST00000618361 H3BQ15 152 aa5.08□□□□□ -1.6
CBWD1-227ENST00000618361 GAS8-AS1O95177 125 aa5.08□□□□□ -1.6
CBWD1-227ENST00000618361 GPX1P07203 203 aa5.08□□□□□ -1.6
CBWD1-227ENST00000618361 SFTA3P0C7M3 94 aa5.08□□□□□ -1.6
CBWD1-227ENST00000618361 AKAIN1P0CW23 69 aa5.08□□□□□ -1.6
CBWD1-227ENST00000618361 SMIM6P0DI80 62 aa5.08□□□□□ -1.6
CBWD1-227ENST00000618361 RNASE4P34096 147 aaKnown RBP5.08□□□□□ -1.6
CBWD1-227ENST00000618361 AKR1D1P51857 326 aa5.08□□□□□ -1.6
CBWD1-227ENST00000618361 LSM3P62310 102 aaKnown RBP5.08□□□□□ -1.6
CBWD1-227ENST00000618361 IFITM3Q01628 133 aa5.08□□□□□ -1.6
CBWD1-227ENST00000618361 LINC01620Q4KN68 170 aa5.08□□□□□ -1.6
CBWD1-227ENST00000618361 OR10J3Q5JRS4 329 aa5.08□□□□□ -1.6
CBWD1-227ENST00000618361 LELP1Q5T871 98 aa5.08□□□□□ -1.6
CBWD1-227ENST00000618361 ZNF546Q86UE3 836 aa5.08□□□□□ -1.6
CBWD1-227ENST00000618361 CLRN3Q8NCR9 226 aa5.08□□□□□ -1.6
CBWD1-227ENST00000618361 AP3S1Q92572 193 aa5.08□□□□□ -1.6
CBWD1-227ENST00000618361 SCP2D1Q9UJQ7 156 aa5.08□□□□□ -1.6
CBWD1-227ENST00000618361 HSPB11Q9Y547 144 aa5.08□□□□□ -1.6
CBWD1-227ENST00000618361 TRBV7-9A0A0J9YWB2 115 aa5.07□□□□□ -1.6
CBWD1-227ENST00000618361 FABP12A6NFH5 140 aa5.07□□□□□ -1.6
CBWD1-227ENST00000618361 IGHV3-30P01768 117 aa5.07□□□□□ -1.6
CBWD1-227ENST00000618361 IGHV3-33P01772 117 aa5.07□□□□□ -1.6
CBWD1-227ENST00000618361 SNRPCP09234 159 aaKnown RBP5.07□□□□□ -1.6
CBWD1-227ENST00000618361 IGHV3-30-3P0DP02 117 aa5.07□□□□□ -1.6
CBWD1-227ENST00000618361 IGHV3-30-5P0DP03 117 aa5.07□□□□□ -1.6
CBWD1-227ENST00000618361 S100PP25815 95 aa5.07□□□□□ -1.6
CBWD1-227ENST00000618361 TRIQKQ629K1 86 aa5.07□□□□□ -1.6
CBWD1-227ENST00000618361 C9orf47Q6ZRZ4 202 aa5.07□□□□□ -1.6
CBWD1-227ENST00000618361 ZFAND2AQ8N6M9 145 aa5.07□□□□□ -1.6
CBWD1-227ENST00000618361 NHLRC2Q8NBF2 726 aa5.07□□□□□ -1.6
CBWD1-227ENST00000618361 ATP6V0E2Q8NHE4 81 aa5.07□□□□□ -1.6
CBWD1-227ENST00000618361 SRRQ9GZT4 340 aa5.07□□□□□ -1.6
CBWD1-227ENST00000618361 AGPAT4-IT1Q9H0P7 198 aa5.07□□□□□ -1.6
CBWD1-227ENST00000618361 SH3BGRL3Q9H299 93 aa5.07□□□□□ -1.6
CBWD1-227ENST00000618361 H3BP45 60 aa5.06□□□□□ -1.6
CBWD1-227ENST00000618361 H3BTX0 84 aa5.06□□□□□ -1.6
CBWD1-227ENST00000618361 GOSR2O14653 212 aa5.06□□□□□ -1.6
CBWD1-227ENST00000618361 LECT2O14960 151 aa5.06□□□□□ -1.6
CBWD1-227ENST00000618361 COX7A2P2O60397 106 aa5.06□□□□□ -1.6
CBWD1-227ENST00000618361 CIDEAO60543 219 aa5.06□□□□□ -1.6
CBWD1-227ENST00000618361 RRAS2P62070 204 aaPredicted RBP5.06□□□□□ -1.6
CBWD1-227ENST00000618361 ERCC8Q13216 396 aa5.06□□□□□ -1.6
CBWD1-227ENST00000618361 FFAR4Q5NUL3 377 aa5.06□□□□□ -1.6
CBWD1-227ENST00000618361 TEX261Q6UWH6 196 aa5.06□□□□□ -1.6
CBWD1-227ENST00000618361 OR4C5Q8NGB2 326 aa5.06□□□□□ -1.6
CBWD1-227ENST00000618361 SMIM4Q8WVI0 70 aa5.06□□□□□ -1.6
CBWD1-227ENST00000618361 BAALCQ8WXS3 180 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms