RNA–Protein interactions for RNA: ENST00000617999.4

UPK1A-204, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPK1A, Length 1,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-204ENST00000617999 F8W036 122 aa11.16□□□□□ -0.62
UPK1A-204ENST00000617999 CA1P00915 261 aaPredicted RBP11.16□□□□□ -0.62
UPK1A-204ENST00000617999 GCGP01275 180 aa11.16□□□□□ -0.62
UPK1A-204ENST00000617999 FAM74A3Q4VXF1 159 aa11.16□□□□□ -0.62
UPK1A-204ENST00000617999 SAPCD1Q5SSQ6 148 aa11.16□□□□□ -0.62
UPK1A-204ENST00000617999 LINC00322Q6ZN03 302 aaPredicted RBP11.16□□□□□ -0.62
UPK1A-204ENST00000617999 COX8CQ7Z4L0 72 aa11.16□□□□□ -0.62
UPK1A-204ENST00000617999 LINC01551Q86U37 167 aa11.16□□□□□ -0.62
UPK1A-204ENST00000617999 TUBA4BQ9H853 241 aa11.16□□□□□ -0.62
UPK1A-204ENST00000617999 NAT8Q9UHE5 227 aa11.16□□□□□ -0.62
UPK1A-204ENST00000617999 C7orf71A4D174 169 aa11.15□□□□□ -0.62
UPK1A-204ENST00000617999 FRMD6-AS1P0C7T7 363 aa11.15□□□□□ -0.62
UPK1A-204ENST00000617999 MGST1P10620 155 aaKnown RBP11.15□□□□□ -0.62
UPK1A-204ENST00000617999 TSPOP30536 169 aa11.15□□□□□ -0.62
UPK1A-204ENST00000617999 RPL23P62829 140 aaKnown RBP11.15□□□□□ -0.62
UPK1A-204ENST00000617999 OR5I1Q13606 314 aa11.15□□□□□ -0.62
UPK1A-204ENST00000617999 SMUG1Q53HV7 270 aa11.15□□□□□ -0.62
UPK1A-204ENST00000617999 PRR27Q6MZM9 219 aa11.15□□□□□ -0.62
UPK1A-204ENST00000617999 MORN3Q6PF18 240 aaPredicted RBP11.15□□□□□ -0.62
UPK1A-204ENST00000617999 OCC1Q8TAD7 63 aa11.15□□□□□ -0.62
UPK1A-204ENST00000617999 SMIM12Q96EX1 92 aa11.15□□□□□ -0.62
UPK1A-204ENST00000617999 NIPSNAP3BQ9BS92 247 aa11.15□□□□□ -0.62
UPK1A-204ENST00000617999 SEC11CQ9BY50 192 aa11.15□□□□□ -0.62
UPK1A-204ENST00000617999 XCL2Q9UBD3 114 aa11.15□□□□□ -0.62
UPK1A-204ENST00000617999 CARHSP1Q9Y2V2 147 aaKnown RBP11.15□□□□□ -0.62
UPK1A-204ENST00000617999 INSP01308 110 aa11.14□□□□□ -0.63
UPK1A-204ENST00000617999 CRIP1P50238 77 aa11.14□□□□□ -0.63
UPK1A-204ENST00000617999 ADIRFQ15847 76 aa11.14□□□□□ -0.63
UPK1A-204ENST00000617999 C10orf91Q5T1B1 145 aa11.14□□□□□ -0.63
UPK1A-204ENST00000617999 SDF2L1Q9HCN8 221 aa11.14□□□□□ -0.63
UPK1A-204ENST00000617999 LY96Q9Y6Y9 160 aa11.14□□□□□ -0.63
UPK1A-204ENST00000617999 TRAV12-3A0A0B4J271 114 aa11.13□□□□□ -0.63
UPK1A-204ENST00000617999 SH2D1AO60880 128 aa11.13□□□□□ -0.63
UPK1A-204ENST00000617999 GPX1P07203 203 aa11.13□□□□□ -0.63
UPK1A-204ENST00000617999 RNASE4P34096 147 aaKnown RBP11.13□□□□□ -0.63
UPK1A-204ENST00000617999 Q6AWC8 147 aa11.13□□□□□ -0.63
UPK1A-204ENST00000617999 KIR2DL5BA0A0G2JN68 375 aa11.12□□□□□ -0.63
UPK1A-204ENST00000617999 KIR2DL5BA0A0G2JPC4 375 aa11.12□□□□□ -0.63
UPK1A-204ENST00000617999 AMBPP02760 352 aa11.12□□□□□ -0.63
UPK1A-204ENST00000617999 APOC4P55056 127 aa11.12□□□□□ -0.63
UPK1A-204ENST00000617999 NUTF2P61970 127 aaKnown RBP11.12□□□□□ -0.63
UPK1A-204ENST00000617999 TMEM241Q24JQ0 296 aa11.12□□□□□ -0.63
UPK1A-204ENST00000617999 KIR2DL5AQ8N109 375 aa11.12□□□□□ -0.63
UPK1A-204ENST00000617999 KIR2DL5BQ8NHK3 375 aa11.12□□□□□ -0.63
UPK1A-204ENST00000617999 ISOC2Q96AB3 205 aa11.12□□□□□ -0.63
UPK1A-204ENST00000617999 CSTL1Q9H114 145 aa11.12□□□□□ -0.63
UPK1A-204ENST00000617999 C11orf21Q9P2W6 132 aa11.12□□□□□ -0.63
UPK1A-204ENST00000617999 C19orf71A6NCJ1 209 aa11.11□□□□□ -0.63
UPK1A-204ENST00000617999 ATP6V1G1O75348 118 aa11.11□□□□□ -0.63
UPK1A-204ENST00000617999 PFN1P07737 140 aaKnown RBP11.11□□□□□ -0.63
UPK1A-204ENST00000617999 FAM162BQ5T6X4 162 aa11.11□□□□□ -0.63
UPK1A-204ENST00000617999 C1orf158Q8N1D5 194 aa11.11□□□□□ -0.63
UPK1A-204ENST00000617999 CSNK1G2-AS1Q8NCQ2 148 aa11.11□□□□□ -0.63
UPK1A-204ENST00000617999 TRAV21A0A0B4J279 112 aa11.1□□□□□ -0.63
UPK1A-204ENST00000617999 KRBOX1C9JBD0 128 aa11.1□□□□□ -0.63
UPK1A-204ENST00000617999 DEFB135Q30KP9 77 aa11.1□□□□□ -0.63
UPK1A-204ENST00000617999 RNASE7Q9H1E1 156 aaKnown RBP11.1□□□□□ -0.63
UPK1A-204ENST00000617999 NAGKQ9UJ70 344 aa11.1□□□□□ -0.63
UPK1A-204ENST00000617999 ZNF324O75467 553 aaPredicted RBP11.09□□□□□ -0.63
UPK1A-204ENST00000617999 RPL19P84098 196 aaKnown RBP11.09□□□□□ -0.63
UPK1A-204ENST00000617999 PNRC1Q12796 327 aaPredicted RBP11.09□□□□□ -0.63
UPK1A-204ENST00000617999 MUC21Q5SSG8 566 aa11.09□□□□□ -0.63
UPK1A-204ENST00000617999 MRAPQ8TCY5 172 aa11.09□□□□□ -0.63
UPK1A-204ENST00000617999 C1QTNF4Q9BXJ3 329 aa11.09□□□□□ -0.63
UPK1A-204ENST00000617999 RETNQ9HD89 108 aa11.09□□□□□ -0.63
UPK1A-204ENST00000617999 M0R036 132 aa11.08□□□□□ -0.64
UPK1A-204ENST00000617999 APOC3P02656 99 aa11.08□□□□□ -0.64
UPK1A-204ENST00000617999 C20orf144Q9BQM9 153 aa11.08□□□□□ -0.64
UPK1A-204ENST00000617999 IGHV3OR16-12A0A075B7B8 117 aa11.07□□□□□ -0.64
UPK1A-204ENST00000617999 IGKV3D-20A0A0C4DH25 116 aa11.07□□□□□ -0.64
UPK1A-204ENST00000617999 ANXA2RQ3ZCQ2 193 aa11.07□□□□□ -0.64
UPK1A-204ENST00000617999 LINC01559Q495D7 138 aa11.07□□□□□ -0.64
UPK1A-204ENST00000617999 IBA57Q5T440 356 aaKnown RBP11.07□□□□□ -0.64
UPK1A-204ENST00000617999 ZNF705AQ6ZN79 300 aaPredicted RBP11.07□□□□□ -0.64
UPK1A-204ENST00000617999 FAM231DQ6ZW35 169 aa11.07□□□□□ -0.64
UPK1A-204ENST00000617999 SFRP2Q96HF1 295 aa11.07□□□□□ -0.64
UPK1A-204ENST00000617999 BIN3Q9NQY0 253 aa11.07□□□□□ -0.64
UPK1A-204ENST00000617999 GOLT1BQ9Y3E0 138 aa11.07□□□□□ -0.64
UPK1A-204ENST00000617999 TMSB15BA0A087X1C1 80 aa11.06□□□□□ -0.64
UPK1A-204ENST00000617999 FABP5P3A8MUU1 101 aa11.06□□□□□ -0.64
UPK1A-204ENST00000617999 P01737 135 aa11.06□□□□□ -0.64
UPK1A-204ENST00000617999 PRM2P04554 102 aa11.06□□□□□ -0.64
UPK1A-204ENST00000617999 ERVFC1-1P60608 527 aa11.06□□□□□ -0.64
UPK1A-204ENST00000617999 NUDT10Q8NFP7 164 aa11.06□□□□□ -0.64
UPK1A-204ENST00000617999 NUDT11Q96G61 164 aa11.06□□□□□ -0.64
UPK1A-204ENST00000617999 RPP21Q9H633 154 aaKnown RBP11.06□□□□□ -0.64
UPK1A-204ENST00000617999 OSTCQ9NRP0 149 aa11.06□□□□□ -0.64
UPK1A-204ENST00000617999 IGHV1OR15-1A0A075B7D0 117 aa11.05□□□□□ -0.64
UPK1A-204ENST00000617999 H7BYZ3 331 aa11.05□□□□□ -0.64
UPK1A-204ENST00000617999 UBE2CO00762 179 aa11.05□□□□□ -0.64
UPK1A-204ENST00000617999 TYMSP04818 313 aa11.05□□□□□ -0.64
UPK1A-204ENST00000617999 DEFA6Q01524 100 aa11.05□□□□□ -0.64
UPK1A-204ENST00000617999 RNF212Q495C1 297 aa11.05□□□□□ -0.64
UPK1A-204ENST00000617999 SBSPONQ8IVN8 264 aa11.05□□□□□ -0.64
UPK1A-204ENST00000617999 TMEM256Q8N2U0 113 aa11.05□□□□□ -0.64
UPK1A-204ENST00000617999 CLRN3Q8NCR9 226 aa11.05□□□□□ -0.64
UPK1A-204ENST00000617999 OR2D3Q8NGH3 330 aa11.05□□□□□ -0.64
UPK1A-204ENST00000617999 PYGO2Q9BRQ0 406 aa11.05□□□□□ -0.64
UPK1A-204ENST00000617999 TMEM208Q9BTX3 173 aa11.05□□□□□ -0.64
UPK1A-204ENST00000617999 TP53TG3Q9ULZ0 132 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms