RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 H7BYZ3 331 aa8.69□□□□□ -1.02
PDPN-211ENST00000617617 MGST1P10620 155 aaKnown RBP8.69□□□□□ -1.02
PDPN-211ENST00000617617 TSPOP30536 169 aa8.69□□□□□ -1.02
PDPN-211ENST00000617617 RIPPLY3P57055 190 aa8.69□□□□□ -1.02
PDPN-211ENST00000617617 ERVFC1-1P60608 527 aa8.69□□□□□ -1.02
PDPN-211ENST00000617617 KRTAP21-3Q3LHN1 58 aa8.69□□□□□ -1.02
PDPN-211ENST00000617617 GDF5OSQ5U4N7 250 aa8.69□□□□□ -1.02
PDPN-211ENST00000617617 LINC00322Q6ZN03 302 aaPredicted RBP8.69□□□□□ -1.02
PDPN-211ENST00000617617 SPATA3Q8NHX4 192 aa8.69□□□□□ -1.02
PDPN-211ENST00000617617 Q8TAT8 98 aa8.69□□□□□ -1.02
PDPN-211ENST00000617617 ATRQ13535 2644 aa8.69□□□□□ -1.02
PDPN-211ENST00000617617 SETD2Q9BYW2 2564 aaPredicted RBP8.69□□□□□ -1.02
PDPN-211ENST00000617617 SMIM27A0A1W2PRY6 76 aa8.68□□□□□ -1.02
PDPN-211ENST00000617617 OR11H12B2RN74 326 aa8.68□□□□□ -1.02
PDPN-211ENST00000617617 AMBPP02760 352 aa8.68□□□□□ -1.02
PDPN-211ENST00000617617 PFN1P07737 140 aaKnown RBP8.68□□□□□ -1.02
PDPN-211ENST00000617617 LINC01559Q495D7 138 aa8.68□□□□□ -1.02
PDPN-211ENST00000617617 NHLRC2Q8NBF2 726 aa8.68□□□□□ -1.02
PDPN-211ENST00000617617 PYGO2Q9BRQ0 406 aa8.68□□□□□ -1.02
PDPN-211ENST00000617617 RPP21Q9H633 154 aaKnown RBP8.68□□□□□ -1.02
PDPN-211ENST00000617617 IL36BQ9NZH7 164 aa8.68□□□□□ -1.02
PDPN-211ENST00000617617 SELENOKQ9Y6D0 94 aa8.68□□□□□ -1.02
PDPN-211ENST00000617617 FABP5P3A8MUU1 101 aa8.68□□□□□ -1.02
PDPN-211ENST00000617617 F6UB75 175 aa8.68□□□□□ -1.02
PDPN-211ENST00000617617 S100A6P06703 90 aa8.68□□□□□ -1.02
PDPN-211ENST00000617617 FOXA3P55318 350 aaPredicted RBP8.68□□□□□ -1.02
PDPN-211ENST00000617617 RPS20P60866 119 aaKnown RBP8.68□□□□□ -1.02
PDPN-211ENST00000617617 EGFEM1PQ0D2K5 195 aa8.68□□□□□ -1.02
PDPN-211ENST00000617617 DNLZQ5SXM8 178 aa8.68□□□□□ -1.02
PDPN-211ENST00000617617 BTF3L4Q96K17 158 aa8.68□□□□□ -1.02
PDPN-211ENST00000617617 C20orf144Q9BQM9 153 aa8.68□□□□□ -1.02
PDPN-211ENST00000617617 AURKAIP1Q9NWT8 199 aaPredicted RBP8.68□□□□□ -1.02
PDPN-211ENST00000617617 JMJD1CQ15652 2540 aa8.68□□□□□ -1.02
PDPN-211ENST00000617617 TRPT1Q86TN4 253 aaKnown RBP8.67□□□□□ -1.02
PDPN-211ENST00000617617 RNASE7Q9H1E1 156 aaKnown RBP8.67□□□□□ -1.02
PDPN-211ENST00000617617 GATCO43716 136 aaKnown RBP8.67□□□□□ -1.02
PDPN-211ENST00000617617 SH2D1AO60880 128 aa8.67□□□□□ -1.02
PDPN-211ENST00000617617 P01737 135 aa8.67□□□□□ -1.02
PDPN-211ENST00000617617 ZNF80P51504 273 aaPredicted RBP8.67□□□□□ -1.02
PDPN-211ENST00000617617 LINC00467Q9BRT7 94 aa8.67□□□□□ -1.02
PDPN-211ENST00000617617 TSKUQ8WUA8 353 aa8.67□□□□□ -1.02
PDPN-211ENST00000617617 DAZAP1Q96EP5 407 aaKnown RBP8.67□□□□□ -1.02
PDPN-211ENST00000617617 TRBV24-1A0A075B6N3 115 aa8.66□□□□□ -1.02
PDPN-211ENST00000617617 ZNF705DP0CH99 300 aaPredicted RBP8.66□□□□□ -1.02
PDPN-211ENST00000617617 ZNF705BP0CI00 300 aaPredicted RBP8.66□□□□□ -1.02
PDPN-211ENST00000617617 CDKN1BP46527 198 aa8.66□□□□□ -1.02
PDPN-211ENST00000617617 BTN1A1Q13410 526 aa8.66□□□□□ -1.02
PDPN-211ENST00000617617 TRAV21A0A0B4J279 112 aa8.66□□□□□ -1.02
PDPN-211ENST00000617617 A8MWL6 223 aa8.66□□□□□ -1.02
PDPN-211ENST00000617617 BTF3P20290 206 aaKnown RBP8.66□□□□□ -1.02
PDPN-211ENST00000617617 DEFB1P60022 68 aa8.66□□□□□ -1.02
PDPN-211ENST00000617617 KCNIP4Q6PIL6 250 aa8.66□□□□□ -1.02
PDPN-211ENST00000617617 ZNF575Q86XF7 245 aa8.66□□□□□ -1.02
PDPN-211ENST00000617617 ZNF705GA8MUZ8 300 aaPredicted RBP8.65□□□□□ -1.02
PDPN-211ENST00000617617 ELOBQ15370 118 aa8.65□□□□□ -1.02
PDPN-211ENST00000617617 PRR9Q5T870 116 aa8.65□□□□□ -1.02
PDPN-211ENST00000617617 C7orf71A4D174 169 aa8.65□□□□□ -1.03
PDPN-211ENST00000617617 RBMY1BA6NDE4 496 aaKnown RBP8.65□□□□□ -1.03
PDPN-211ENST00000617617 RBMY1EA6NEQ0 496 aaKnown RBP8.65□□□□□ -1.03
PDPN-211ENST00000617617 ZNF324O75467 553 aaPredicted RBP8.65□□□□□ -1.03
PDPN-211ENST00000617617 RBMY1DP0C7P1 496 aaKnown RBP8.65□□□□□ -1.03
PDPN-211ENST00000617617 TDRG1Q3Y452 100 aa8.65□□□□□ -1.03
PDPN-211ENST00000617617 ACTL10Q5JWF8 245 aa8.65□□□□□ -1.03
PDPN-211ENST00000617617 MORN3Q6PF18 240 aaPredicted RBP8.65□□□□□ -1.03
PDPN-211ENST00000617617 AGRNO00468 2067 aa8.65□□□□□ -1.03
PDPN-211ENST00000617617 KNCNA6PVL3 124 aa8.64□□□□□ -1.03
PDPN-211ENST00000617617 COLCA2A8K830 154 aa8.64□□□□□ -1.03
PDPN-211ENST00000617617 TYMSP04818 313 aa8.64□□□□□ -1.03
PDPN-211ENST00000617617 IGLL1P15814 213 aa8.64□□□□□ -1.03
PDPN-211ENST00000617617 S100PP25815 95 aa8.64□□□□□ -1.03
PDPN-211ENST00000617617 CBLN2Q8IUK8 224 aa8.64□□□□□ -1.03
PDPN-211ENST00000617617 VWFP04275 2813 aa8.64□□□□□ -1.03
PDPN-211ENST00000617617 XKRY2A2RUG3 117 aa8.64□□□□□ -1.03
PDPN-211ENST00000617617 MED14OSP0DP75 135 aa8.64□□□□□ -1.03
PDPN-211ENST00000617617 PRR27Q6MZM9 219 aa8.64□□□□□ -1.03
PDPN-211ENST00000617617 GTSCR1Q86UQ5 136 aa8.64□□□□□ -1.03
PDPN-211ENST00000617617 C12orf57Q99622 126 aa8.64□□□□□ -1.03
PDPN-211ENST00000617617 TP53TG3Q9ULZ0 132 aa8.64□□□□□ -1.03
PDPN-211ENST00000617617 GPX1P07203 203 aa8.63□□□□□ -1.03
PDPN-211ENST00000617617 WDR73Q6P4I2 378 aa8.63□□□□□ -1.03
PDPN-211ENST00000617617 RASL11AQ6T310 242 aa8.63□□□□□ -1.03
PDPN-211ENST00000617617 CRXO43186 299 aaPredicted RBP8.63□□□□□ -1.03
PDPN-211ENST00000617617 CD7P09564 240 aa8.63□□□□□ -1.03
PDPN-211ENST00000617617 Q8N1Y9 231 aa8.63□□□□□ -1.03
PDPN-211ENST00000617617 NAT8BQ9UHF3 227 aa8.63□□□□□ -1.03
PDPN-211ENST00000617617 TMEM189A5PLL7 270 aa8.62□□□□□ -1.03
PDPN-211ENST00000617617 TMEM88Q6PEY1 159 aa8.62□□□□□ -1.03
PDPN-211ENST00000617617 STHQ8IWL8 128 aa8.62□□□□□ -1.03
PDPN-211ENST00000617617 MDFIQ99750 246 aa8.62□□□□□ -1.03
PDPN-211ENST00000617617 CNFNQ9BYD5 112 aa8.62□□□□□ -1.03
PDPN-211ENST00000617617 A8MZ25 164 aa8.62□□□□□ -1.03
PDPN-211ENST00000617617 IGLC6P0CF74 106 aa8.62□□□□□ -1.03
PDPN-211ENST00000617617 GFI1BQ5VTD9 330 aa8.62□□□□□ -1.03
PDPN-211ENST00000617617 ATP5L2Q7Z4Y8 100 aa8.62□□□□□ -1.03
PDPN-211ENST00000617617 C11orf21Q9P2W6 132 aa8.62□□□□□ -1.03
PDPN-211ENST00000617617 IGKV3D-20A0A0C4DH25 116 aa8.62□□□□□ -1.03
PDPN-211ENST00000617617 A0A1W2PPQ1 181 aa8.62□□□□□ -1.03
PDPN-211ENST00000617617 CTRLP40313 264 aa8.62□□□□□ -1.03
PDPN-211ENST00000617617 AKR1D1P51857 326 aa8.62□□□□□ -1.03
PDPN-211ENST00000617617 COX19Q49B96 90 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms