RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 PSG9Q00887 426 aa10.78□□□□□ -0.68
CACNA1C-231ENST00000616390 OR4C46A6NHA9 309 aa10.77□□□□□ -0.68
CACNA1C-231ENST00000616390 ZNF80P51504 273 aaPredicted RBP10.77□□□□□ -0.68
CACNA1C-231ENST00000616390 EBI3Q14213 229 aa10.77□□□□□ -0.68
CACNA1C-231ENST00000616390 PRSS3P2Q8NHM4 247 aa10.77□□□□□ -0.68
CACNA1C-231ENST00000616390 AJUBAQ96IF1 538 aa10.77□□□□□ -0.68
CACNA1C-231ENST00000616390 NDFIP1Q9BT67 221 aa10.77□□□□□ -0.68
CACNA1C-231ENST00000616390 hDV102S1A0JD36 115 aa10.77□□□□□ -0.69
CACNA1C-231ENST00000616390 OOSP1A8MZH6 123 aa10.77□□□□□ -0.69
CACNA1C-231ENST00000616390 OVOL3O00110 214 aa10.77□□□□□ -0.69
CACNA1C-231ENST00000616390 ORM1P02763 201 aa10.77□□□□□ -0.69
CACNA1C-231ENST00000616390 HINT1P49773 126 aaPredicted RBP10.77□□□□□ -0.69
CACNA1C-231ENST00000616390 AMN1Q8IY45 258 aa10.77□□□□□ -0.69
CACNA1C-231ENST00000616390 PPDPFQ9H3Y8 114 aa10.77□□□□□ -0.69
CACNA1C-231ENST00000616390 MYO18BQ8IUG5 2567 aa10.77□□□□□ -0.69
CACNA1C-231ENST00000616390 PIEZO1Q92508 2521 aa10.77□□□□□ -0.69
CACNA1C-231ENST00000616390 PRAC2D3DTV9 90 aa10.76□□□□□ -0.69
CACNA1C-231ENST00000616390 PPIFP30405 207 aaKnown RBP10.76□□□□□ -0.69
CACNA1C-231ENST00000616390 PDE6HQ13956 83 aa10.76□□□□□ -0.69
CACNA1C-231ENST00000616390 FAM106AQ4KMX7 169 aa10.76□□□□□ -0.69
CACNA1C-231ENST00000616390 FAM162BQ5T6X4 162 aa10.76□□□□□ -0.69
CACNA1C-231ENST00000616390 KLHDC1Q8N7A1 406 aa10.76□□□□□ -0.69
CACNA1C-231ENST00000616390 PRR25Q96S07 402 aa10.76□□□□□ -0.69
CACNA1C-231ENST00000616390 SELENOKQ9Y6D0 94 aa10.76□□□□□ -0.69
CACNA1C-231ENST00000616390 NPFFO15130 113 aa10.76□□□□□ -0.69
CACNA1C-231ENST00000616390 TRAV9-2A0A087WT02 112 aa10.76□□□□□ -0.69
CACNA1C-231ENST00000616390 CENPVL3A0A0U1RRI6 287 aa10.76□□□□□ -0.69
CACNA1C-231ENST00000616390 D6R8Y8 96 aa10.76□□□□□ -0.69
CACNA1C-231ENST00000616390 SMKR1H3BMG3 65 aa10.76□□□□□ -0.69
CACNA1C-231ENST00000616390 SYS1-DBNDD2H3BUS1 97 aa10.75□□□□□ -0.69
CACNA1C-231ENST00000616390 SMIM17P0DL12 118 aa10.75□□□□□ -0.69
CACNA1C-231ENST00000616390 TWIST1Q15672 202 aa10.75□□□□□ -0.69
CACNA1C-231ENST00000616390 CHCHD1Q96BP2 118 aaKnown RBP10.75□□□□□ -0.69
CACNA1C-231ENST00000616390 TRBV6-1A0A0K0K1D8 114 aa10.75□□□□□ -0.69
CACNA1C-231ENST00000616390 IGHG4P01861 327 aa10.75□□□□□ -0.69
CACNA1C-231ENST00000616390 IFI27P40305 119 aaPredicted RBP10.75□□□□□ -0.69
CACNA1C-231ENST00000616390 TCTAP57738 103 aa10.75□□□□□ -0.69
CACNA1C-231ENST00000616390 LY6EQ16553 131 aa10.75□□□□□ -0.69
CACNA1C-231ENST00000616390 FAM110DQ8TAY7 271 aaPredicted RBP10.75□□□□□ -0.69
CACNA1C-231ENST00000616390 ZNF502Q8TBZ5 544 aa10.75□□□□□ -0.69
CACNA1C-231ENST00000616390 RNF183Q96D59 192 aa10.75□□□□□ -0.69
CACNA1C-231ENST00000616390 USP9XQ93008 2570 aaPredicted RBP10.74□□□□□ -0.69
CACNA1C-231ENST00000616390 B5MCH6 92 aa10.74□□□□□ -0.69
CACNA1C-231ENST00000616390 IGHV4-39P01824 125 aa10.74□□□□□ -0.69
CACNA1C-231ENST00000616390 AMMECR1LQ6DCA0 310 aa10.74□□□□□ -0.69
CACNA1C-231ENST00000616390 FA2HQ7L5A8 372 aa10.74□□□□□ -0.69
CACNA1C-231ENST00000616390 HSPB8Q9UJY1 196 aa10.74□□□□□ -0.69
CACNA1C-231ENST00000616390 NEGR1Q7Z3B1 354 aa10.74□□□□□ -0.69
CACNA1C-231ENST00000616390 CCDC140Q96MF4 163 aa10.74□□□□□ -0.69
CACNA1C-231ENST00000616390 AP5S1Q9NUS5 200 aa10.74□□□□□ -0.69
CACNA1C-231ENST00000616390 TRAV40A0A0B4J280 105 aa10.73□□□□□ -0.69
CACNA1C-231ENST00000616390 NCR2O95944 276 aa10.73□□□□□ -0.69
CACNA1C-231ENST00000616390 OR5AL1P0C617 328 aa10.73□□□□□ -0.69
CACNA1C-231ENST00000616390 TSPOP30536 169 aa10.73□□□□□ -0.69
CACNA1C-231ENST00000616390 LOXL1Q08397 574 aaPredicted RBP10.73□□□□□ -0.69
CACNA1C-231ENST00000616390 HSD52Q0P140 79 aa10.73□□□□□ -0.69
CACNA1C-231ENST00000616390 MAP1LC3CQ9BXW4 147 aa10.73□□□□□ -0.69
CACNA1C-231ENST00000616390 MRPL16Q9NX20 251 aaKnown RBP10.73□□□□□ -0.69
CACNA1C-231ENST00000616390 MSRB1Q9NZV6 116 aa10.73□□□□□ -0.69
CACNA1C-231ENST00000616390 ERG28Q9UKR5 140 aa10.73□□□□□ -0.69
CACNA1C-231ENST00000616390 DOPEY2Q9Y3R5 2298 aa10.73□□□□□ -0.69
CACNA1C-231ENST00000616390 CACNA1AO00555 2505 aa10.73□□□□□ -0.69
CACNA1C-231ENST00000616390 IGSF10Q6WRI0 2623 aa10.73□□□□□ -0.69
CACNA1C-231ENST00000616390 RNF152Q8N8N0 203 aa10.73□□□□□ -0.69
CACNA1C-231ENST00000616390 POLQO75417 2590 aa10.73□□□□□ -0.69
CACNA1C-231ENST00000616390 BUB3O43684 328 aa10.72□□□□□ -0.69
CACNA1C-231ENST00000616390 IL17RELQ6ZVW7 336 aa10.72□□□□□ -0.69
CACNA1C-231ENST00000616390 OR8A1Q8NGG7 326 aa10.72□□□□□ -0.69
CACNA1C-231ENST00000616390 ZFYVE26Q68DK2 2539 aa10.72□□□□□ -0.69
CACNA1C-231ENST00000616390 ACACBO00763 2458 aa10.72□□□□□ -0.69
CACNA1C-231ENST00000616390 CD300EQ496F6 205 aaPredicted RBP10.71□□□□□ -0.69
CACNA1C-231ENST00000616390 PRELID3AQ96N28 172 aa10.71□□□□□ -0.69
CACNA1C-231ENST00000616390 ZFAND3Q9H8U3 227 aa10.71□□□□□ -0.69
CACNA1C-231ENST00000616390 MRPS16Q9Y3D3 137 aaKnown RBP10.71□□□□□ -0.69
CACNA1C-231ENST00000616390 GAGE12HA6NDE8 117 aa10.71□□□□□ -0.69
CACNA1C-231ENST00000616390 WFDC3Q8IUB2 231 aa10.71□□□□□ -0.69
CACNA1C-231ENST00000616390 FAM208BQ5VWN6 2430 aa10.71□□□□□ -0.7
CACNA1C-231ENST00000616390 USP9YO00507 2555 aaPredicted RBP10.71□□□□□ -0.7
CACNA1C-231ENST00000616390 IGHV4-61A0A0C4DH41 118 aa10.71□□□□□ -0.7
CACNA1C-231ENST00000616390 C5orf56Q8N8D9 126 aa10.71□□□□□ -0.7
CACNA1C-231ENST00000616390 PRORYQ9H606 182 aa10.71□□□□□ -0.7
CACNA1C-231ENST00000616390 IGKV3-7A0A075B6H7 116 aa10.7□□□□□ -0.7
CACNA1C-231ENST00000616390 SMIM9A6NGZ8 99 aa10.7□□□□□ -0.7
CACNA1C-231ENST00000616390 MRPL51Q4U2R6 128 aaKnown RBP10.7□□□□□ -0.7
CACNA1C-231ENST00000616390 Q6ZQT7 251 aa10.7□□□□□ -0.7
CACNA1C-231ENST00000616390 GTF2H5Q6ZYL4 71 aa10.7□□□□□ -0.7
CACNA1C-231ENST00000616390 EEF1AKMT3Q96AZ1 226 aa10.7□□□□□ -0.7
CACNA1C-231ENST00000616390 CLPSL1A2RUU4 121 aa10.7□□□□□ -0.7
CACNA1C-231ENST00000616390 IGHV3-11P01762 117 aa10.7□□□□□ -0.7
CACNA1C-231ENST00000616390 CKS2P33552 79 aa10.7□□□□□ -0.7
CACNA1C-231ENST00000616390 MRPL23Q16540 153 aaKnown RBP10.7□□□□□ -0.7
CACNA1C-231ENST00000616390 FAM104BQ5XKR9 115 aa10.7□□□□□ -0.7
CACNA1C-231ENST00000616390 Q6AWC8 147 aa10.7□□□□□ -0.7
CACNA1C-231ENST00000616390 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.7□□□□□ -0.7
CACNA1C-231ENST00000616390 LCNL1Q6ZST4 164 aa10.7□□□□□ -0.7
CACNA1C-231ENST00000616390 TMEM191AQ9H0A3 160 aa10.7□□□□□ -0.7
CACNA1C-231ENST00000616390 SIGLEC8Q9NYZ4 499 aa10.7□□□□□ -0.7
CACNA1C-231ENST00000616390 ZANQ9Y493 2812 aa10.7□□□□□ -0.7
CACNA1C-231ENST00000616390 TAX1BP3O14907 124 aa10.69□□□□□ -0.7
CACNA1C-231ENST00000616390 IGHV4-38-2P0DP08 117 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms