RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 NMUP48645 174 aa10.26□□□□□ -0.77
FOXN3-219ENST00000615335 PAX8Q06710 450 aa10.26□□□□□ -0.77
FOXN3-219ENST00000615335 RBPMS2Q6ZRY4 209 aaKnown RBP10.26□□□□□ -0.77
FOXN3-219ENST00000615335 TMEM167AQ8TBQ9 72 aa10.26□□□□□ -0.77
FOXN3-219ENST00000615335 NHP2Q9NX24 153 aaKnown RBP10.26□□□□□ -0.77
FOXN3-219ENST00000615335 AMMECR1Q9Y4X0 333 aaPredicted RBP10.26□□□□□ -0.77
FOXN3-219ENST00000615335 TIMM8BQ9Y5J9 83 aaPredicted RBP10.26□□□□□ -0.77
FOXN3-219ENST00000615335 TEX15Q9BXT5 2789 aa10.26□□□□□ -0.77
FOXN3-219ENST00000615335 E7EUB6 86 aa10.25□□□□□ -0.77
FOXN3-219ENST00000615335 CEND1Q8N111 149 aa10.25□□□□□ -0.77
FOXN3-219ENST00000615335 LINC00311Q8N616 119 aa10.25□□□□□ -0.77
FOXN3-219ENST00000615335 OR4C13Q8NGP0 309 aa10.25□□□□□ -0.77
FOXN3-219ENST00000615335 CHAC1Q9BUX1 264 aa10.25□□□□□ -0.77
FOXN3-219ENST00000615335 C7orf69Q9H7B7 122 aa10.25□□□□□ -0.77
FOXN3-219ENST00000615335 AKAP9Q99996 3911 aa10.25□□□□□ -0.77
FOXN3-219ENST00000615335 IGLV1-47P01700 117 aa10.25□□□□□ -0.77
FOXN3-219ENST00000615335 IGHG4P01861 327 aa10.25□□□□□ -0.77
FOXN3-219ENST00000615335 IGHV4-31P0DP07 118 aa10.25□□□□□ -0.77
FOXN3-219ENST00000615335 ZNF138P52744 262 aa10.25□□□□□ -0.77
FOXN3-219ENST00000615335 SUB1P53999 127 aaKnown RBP eCLIP10.25□□□□□ -0.77
FOXN3-219ENST00000615335 C10orf113Q5VZT2 155 aa10.25□□□□□ -0.77
FOXN3-219ENST00000615335 PDPNQ86YL7 162 aa10.25□□□□□ -0.77
FOXN3-219ENST00000615335 CIARTQ8N365 385 aaPredicted RBP10.25□□□□□ -0.77
FOXN3-219ENST00000615335 OR1L4Q8NGR5 311 aa10.25□□□□□ -0.77
FOXN3-219ENST00000615335 F11RQ9Y624 299 aaKnown RBP10.25□□□□□ -0.77
FOXN3-219ENST00000615335 CSPG4Q6UVK1 2322 aa10.25□□□□□ -0.77
FOXN3-219ENST00000615335 NPIPB6E9PJ23 425 aa10.24□□□□□ -0.77
FOXN3-219ENST00000615335 K7ERJ3 54 aa10.24□□□□□ -0.77
FOXN3-219ENST00000615335 PEX7O00628 323 aa10.24□□□□□ -0.77
FOXN3-219ENST00000615335 HOXB4P17483 251 aaPredicted RBP10.24□□□□□ -0.77
FOXN3-219ENST00000615335 WT1-ASQ06250 92 aa10.24□□□□□ -0.77
FOXN3-219ENST00000615335 TAL2Q16559 108 aa10.24□□□□□ -0.77
FOXN3-219ENST00000615335 TM4SF20Q53R12 229 aa10.24□□□□□ -0.77
FOXN3-219ENST00000615335 PCP2Q8IVA1 136 aa10.24□□□□□ -0.77
FOXN3-219ENST00000615335 OR11H6Q8NGC7 330 aa10.24□□□□□ -0.77
FOXN3-219ENST00000615335 OR8A1Q8NGG7 326 aa10.24□□□□□ -0.77
FOXN3-219ENST00000615335 NPIPB3Q92617 1050 aa10.24□□□□□ -0.77
FOXN3-219ENST00000615335 PRELID3AQ96N28 172 aa10.24□□□□□ -0.77
FOXN3-219ENST00000615335 PAXXQ9BUH6 204 aa10.24□□□□□ -0.77
FOXN3-219ENST00000615335 BUB1B-PAK6H3BSN5 160 aa10.24□□□□□ -0.77
FOXN3-219ENST00000615335 PYYP10082 97 aa10.24□□□□□ -0.77
FOXN3-219ENST00000615335 HCP5Q6MZN7 132 aa10.24□□□□□ -0.77
FOXN3-219ENST00000615335 PIP4P2Q8N4L2 257 aa10.24□□□□□ -0.77
FOXN3-219ENST00000615335 PRSS3P2Q8NHM4 247 aa10.24□□□□□ -0.77
FOXN3-219ENST00000615335 TLN2Q9Y4G6 2542 aa10.23□□□□□ -0.77
FOXN3-219ENST00000615335 CGB1A6NKQ9 187 aa10.23□□□□□ -0.77
FOXN3-219ENST00000615335 FABP5P3A8MUU1 101 aa10.23□□□□□ -0.77
FOXN3-219ENST00000615335 TMEM262E9PQX1 116 aa10.23□□□□□ -0.77
FOXN3-219ENST00000615335 HAX1O00165 279 aa10.23□□□□□ -0.77
FOXN3-219ENST00000615335 DIAPH2-AS1Q14236 149 aa10.23□□□□□ -0.77
FOXN3-219ENST00000615335 C10orf55Q5SWW7 151 aa10.23□□□□□ -0.77
FOXN3-219ENST00000615335 LINC00479Q96M42 142 aa10.23□□□□□ -0.77
FOXN3-219ENST00000615335 ZNF492Q9P255 531 aa10.23□□□□□ -0.77
FOXN3-219ENST00000615335 ACANP16112 2415 aa10.23□□□□□ -0.77
FOXN3-219ENST00000615335 CSN3P07498 182 aa10.23□□□□□ -0.77
FOXN3-219ENST00000615335 CACNG7P62955 275 aa10.23□□□□□ -0.77
FOXN3-219ENST00000615335 PATE2Q6UY27 113 aa10.23□□□□□ -0.77
FOXN3-219ENST00000615335 ZNF329Q86UD4 541 aa10.23□□□□□ -0.77
FOXN3-219ENST00000615335 ZNF414Q96IQ9 312 aa10.23□□□□□ -0.77
FOXN3-219ENST00000615335 PGLYRP4Q96LB8 373 aa10.23□□□□□ -0.77
FOXN3-219ENST00000615335 PRSS22Q9GZN4 317 aa10.23□□□□□ -0.77
FOXN3-219ENST00000615335 IGHV3-48P01763 117 aa10.22□□□□□ -0.77
FOXN3-219ENST00000615335 HLA-DRB4P13762 266 aa10.22□□□□□ -0.77
FOXN3-219ENST00000615335 SRD5A1P18405 259 aa10.22□□□□□ -0.77
FOXN3-219ENST00000615335 CD24P25063 80 aa10.22□□□□□ -0.77
FOXN3-219ENST00000615335 UBE2E1P51965 193 aa10.22□□□□□ -0.77
FOXN3-219ENST00000615335 THAP8Q8NA92 274 aa10.22□□□□□ -0.77
FOXN3-219ENST00000615335 HLA-DRB4X5D2U9 266 aa10.22□□□□□ -0.77
FOXN3-219ENST00000615335 IGKV1D-37A0A075B6S9 117 aa10.22□□□□□ -0.77
FOXN3-219ENST00000615335 CENPVL3A0A0U1RRI6 287 aa10.22□□□□□ -0.77
FOXN3-219ENST00000615335 PRSS29PA6NIE9 313 aa10.22□□□□□ -0.77
FOXN3-219ENST00000615335 IGLV2-23P01705 113 aa10.22□□□□□ -0.77
FOXN3-219ENST00000615335 P01737 135 aa10.22□□□□□ -0.77
FOXN3-219ENST00000615335 RRN3P1Q2M238 152 aa10.22□□□□□ -0.77
FOXN3-219ENST00000615335 VMA21Q3ZAQ7 101 aa10.22□□□□□ -0.77
FOXN3-219ENST00000615335 PPDPFLQ8WWR9 84 aa10.22□□□□□ -0.77
FOXN3-219ENST00000615335 RPEQ96AT9 228 aa10.22□□□□□ -0.77
FOXN3-219ENST00000615335 ODF3BA8MYP8 253 aa10.21□□□□□ -0.77
FOXN3-219ENST00000615335 NHLRC4P0CG21 123 aaPredicted RBP10.21□□□□□ -0.77
FOXN3-219ENST00000615335 ZNF137PP52743 207 aa10.21□□□□□ -0.77
FOXN3-219ENST00000615335 TCTAP57738 103 aa10.21□□□□□ -0.77
FOXN3-219ENST00000615335 DPM3Q9P2X0 92 aa10.21□□□□□ -0.77
FOXN3-219ENST00000615335 SETXQ7Z333 2677 aaKnown RBP10.21□□□□□ -0.78
FOXN3-219ENST00000615335 IGHV3OR16-10A0A075B7F0 116 aa10.21□□□□□ -0.78
FOXN3-219ENST00000615335 A0A087WX48 190 aa10.21□□□□□ -0.78
FOXN3-219ENST00000615335 TRAV40A0A0B4J280 105 aa10.21□□□□□ -0.78
FOXN3-219ENST00000615335 FXYD5Q96DB9 178 aa10.21□□□□□ -0.78
FOXN3-219ENST00000615335 MRPL36Q9P0J6 103 aaKnown RBP10.21□□□□□ -0.78
FOXN3-219ENST00000615335 RHODO00212 210 aa10.2□□□□□ -0.78
FOXN3-219ENST00000615335 AVPP01185 164 aa10.2□□□□□ -0.78
FOXN3-219ENST00000615335 C12orf74Q32Q52 190 aa10.2□□□□□ -0.78
FOXN3-219ENST00000615335 CFAP126Q5VTH2 177 aa10.2□□□□□ -0.78
FOXN3-219ENST00000615335 CITED1Q99966 193 aa10.2□□□□□ -0.78
FOXN3-219ENST00000615335 ZFHX3Q15911 3703 aa10.2□□□□□ -0.78
FOXN3-219ENST00000615335 A0A1W2PPI3 338 aa10.19□□□□□ -0.78
FOXN3-219ENST00000615335 J3QLI3 93 aa10.19□□□□□ -0.78
FOXN3-219ENST00000615335 ASPHD1Q5U4P2 390 aa10.19□□□□□ -0.78
FOXN3-219ENST00000615335 AMTNQ6UX39 209 aa10.19□□□□□ -0.78
FOXN3-219ENST00000615335 LINC00305Q7Z4B0 112 aa10.19□□□□□ -0.78
FOXN3-219ENST00000615335 GATD1Q8NB37 220 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms