RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 BTN1A1Q13410 526 aa5.89□□□□□ -1.47
PCDH9-205ENST00000614931 RBMY1FQ15415 496 aaKnown RBP5.89□□□□□ -1.47
PCDH9-205ENST00000614931 SPINK13Q1W4C9 94 aa5.89□□□□□ -1.47
PCDH9-205ENST00000614931 TMEM241Q24JQ0 296 aa5.89□□□□□ -1.47
PCDH9-205ENST00000614931 FAM74A3Q4VXF1 159 aa5.89□□□□□ -1.47
PCDH9-205ENST00000614931 COX8CQ7Z4L0 72 aa5.89□□□□□ -1.47
PCDH9-205ENST00000614931 GTSCR1Q86UQ5 136 aa5.89□□□□□ -1.47
PCDH9-205ENST00000614931 TMEM183AQ8IXX5 376 aa5.89□□□□□ -1.47
PCDH9-205ENST00000614931 WWC2-AS2Q96NR7 200 aa5.89□□□□□ -1.47
PCDH9-205ENST00000614931 ODF3Q96PU9 254 aa5.89□□□□□ -1.47
PCDH9-205ENST00000614931 SRD5A3Q9H8P0 318 aa5.89□□□□□ -1.47
PCDH9-205ENST00000614931 C11orf21Q9P2W6 132 aa5.89□□□□□ -1.47
PCDH9-205ENST00000614931 U3KQK5 164 aa5.89□□□□□ -1.47
PCDH9-205ENST00000614931 TRAV12-2A0A075B6T6 113 aa5.88□□□□□ -1.47
PCDH9-205ENST00000614931 FBLL1A6NHQ2 334 aaKnown RBP5.88□□□□□ -1.47
PCDH9-205ENST00000614931 KLLNB2CW77 178 aa5.88□□□□□ -1.47
PCDH9-205ENST00000614931 KRBOX1C9JBD0 128 aa5.88□□□□□ -1.47
PCDH9-205ENST00000614931 CRXO43186 299 aaPredicted RBP5.88□□□□□ -1.47
PCDH9-205ENST00000614931 SH2D1AO60880 128 aa5.88□□□□□ -1.47
PCDH9-205ENST00000614931 GCGP01275 180 aa5.88□□□□□ -1.47
PCDH9-205ENST00000614931 APOC3P02656 99 aa5.88□□□□□ -1.47
PCDH9-205ENST00000614931 CMC4P56277 68 aaPredicted RBP5.88□□□□□ -1.47
PCDH9-205ENST00000614931 ADIRFQ15847 76 aa5.88□□□□□ -1.47
PCDH9-205ENST00000614931 ATRAIDQ6UW56 229 aa5.88□□□□□ -1.47
PCDH9-205ENST00000614931 STHQ8IWL8 128 aa5.88□□□□□ -1.47
PCDH9-205ENST00000614931 ISOC2Q96AB3 205 aa5.88□□□□□ -1.47
PCDH9-205ENST00000614931 CLUHP3Q96NS8 147 aa5.88□□□□□ -1.47
PCDH9-205ENST00000614931 NIPSNAP3BQ9BS92 247 aa5.88□□□□□ -1.47
PCDH9-205ENST00000614931 ZFP30Q9Y2G7 519 aa5.88□□□□□ -1.47
PCDH9-205ENST00000614931 LY96Q9Y6Y9 160 aa5.88□□□□□ -1.47
PCDH9-205ENST00000614931 TRBV7-9A0A0J9YWB2 115 aa5.87□□□□□ -1.47
PCDH9-205ENST00000614931 C19orf71A6NCJ1 209 aa5.87□□□□□ -1.47
PCDH9-205ENST00000614931 MGST1P10620 155 aaKnown RBP5.87□□□□□ -1.47
PCDH9-205ENST00000614931 LEPP41159 167 aa5.87□□□□□ -1.47
PCDH9-205ENST00000614931 SMUG1Q53HV7 270 aa5.87□□□□□ -1.47
PCDH9-205ENST00000614931 GFI1BQ5VTD9 330 aa5.87□□□□□ -1.47
PCDH9-205ENST00000614931 PRR27Q6MZM9 219 aa5.87□□□□□ -1.47
PCDH9-205ENST00000614931 NDFIP1Q9BT67 221 aa5.87□□□□□ -1.47
PCDH9-205ENST00000614931 RNASE7Q9H1E1 156 aaKnown RBP5.87□□□□□ -1.47
PCDH9-205ENST00000614931 LENEPQ9Y5L5 61 aa5.87□□□□□ -1.47
PCDH9-205ENST00000614931 C7orf71A4D174 169 aa5.86□□□□□ -1.47
PCDH9-205ENST00000614931 A8MZ25 164 aa5.86□□□□□ -1.47
PCDH9-205ENST00000614931 ZNF324O75467 553 aaPredicted RBP5.86□□□□□ -1.47
PCDH9-205ENST00000614931 FRMD6-AS1P0C7T7 363 aa5.86□□□□□ -1.47
PCDH9-205ENST00000614931 IGHV4-30-4P0DP06 118 aa5.86□□□□□ -1.47
PCDH9-205ENST00000614931 RNASE4P34096 147 aaKnown RBP5.86□□□□□ -1.47
PCDH9-205ENST00000614931 RPL19P84098 196 aaKnown RBP5.86□□□□□ -1.47
PCDH9-205ENST00000614931 SAPCD1Q5SSQ6 148 aa5.86□□□□□ -1.47
PCDH9-205ENST00000614931 Q6AWC8 147 aa5.86□□□□□ -1.47
PCDH9-205ENST00000614931 ZNF575Q86XF7 245 aa5.86□□□□□ -1.47
PCDH9-205ENST00000614931 SBSPONQ8IVN8 264 aa5.86□□□□□ -1.47
PCDH9-205ENST00000614931 CLRN3Q8NCR9 226 aa5.86□□□□□ -1.47
PCDH9-205ENST00000614931 SMIM12Q96EX1 92 aa5.86□□□□□ -1.47
PCDH9-205ENST00000614931 MUC4Q99102 2169 aa5.86□□□□□ -1.47
PCDH9-205ENST00000614931 TRAV12-3A0A0B4J271 114 aa5.85□□□□□ -1.47
PCDH9-205ENST00000614931 M0R036 132 aa5.85□□□□□ -1.47
PCDH9-205ENST00000614931 GPX1P07203 203 aa5.85□□□□□ -1.47
PCDH9-205ENST00000614931 CDKN1BP46527 198 aa5.85□□□□□ -1.47
PCDH9-205ENST00000614931 PNRC1Q12796 327 aaPredicted RBP5.85□□□□□ -1.47
PCDH9-205ENST00000614931 RNF212Q495C1 297 aa5.85□□□□□ -1.47
PCDH9-205ENST00000614931 FAM162BQ5T6X4 162 aa5.85□□□□□ -1.47
PCDH9-205ENST00000614931 C1orf158Q8N1D5 194 aa5.85□□□□□ -1.47
PCDH9-205ENST00000614931 NUDT10Q8NFP7 164 aa5.85□□□□□ -1.47
PCDH9-205ENST00000614931 NUDT11Q96G61 164 aa5.85□□□□□ -1.47
PCDH9-205ENST00000614931 SFRP2Q96HF1 295 aa5.85□□□□□ -1.47
PCDH9-205ENST00000614931 XCL2Q9UBD3 114 aa5.85□□□□□ -1.47
PCDH9-205ENST00000614931 V9GYV3 84 aa5.85□□□□□ -1.47
PCDH9-205ENST00000614931 IGKV3D-20A0A0C4DH25 116 aa5.84□□□□□ -1.47
PCDH9-205ENST00000614931 C7orf77A4D0Y5 90 aa5.84□□□□□ -1.47
PCDH9-205ENST00000614931 SCO1O75880 301 aa5.84□□□□□ -1.47
PCDH9-205ENST00000614931 CA1P00915 261 aaPredicted RBP5.84□□□□□ -1.47
PCDH9-205ENST00000614931 PRM2P04554 102 aa5.84□□□□□ -1.47
PCDH9-205ENST00000614931 TSPOP30536 169 aa5.84□□□□□ -1.47
PCDH9-205ENST00000614931 MUC21Q5SSG8 566 aa5.84□□□□□ -1.47
PCDH9-205ENST00000614931 IBA57Q5T440 356 aaKnown RBP5.84□□□□□ -1.47
PCDH9-205ENST00000614931 FAM231DQ6ZW35 169 aa5.84□□□□□ -1.47
PCDH9-205ENST00000614931 CSNK1G2-AS1Q8NCQ2 148 aa5.84□□□□□ -1.47
PCDH9-205ENST00000614931 OSTCQ9NRP0 149 aa5.84□□□□□ -1.47
PCDH9-205ENST00000614931 NACAE9PAV3 2078 aa5.83□□□□□ -1.48
PCDH9-205ENST00000614931 TMSB15BA0A087X1C1 80 aa5.83□□□□□ -1.48
PCDH9-205ENST00000614931 LOC102724200A0A096LPH7 203 aaPredicted RBP5.83□□□□□ -1.48
PCDH9-205ENST00000614931 TRAV21A0A0B4J279 112 aa5.83□□□□□ -1.48
PCDH9-205ENST00000614931 FABP5P3A8MUU1 101 aa5.83□□□□□ -1.48
PCDH9-205ENST00000614931 GATCO43716 136 aaKnown RBP5.83□□□□□ -1.48
PCDH9-205ENST00000614931 SNAPINO95295 136 aa5.83□□□□□ -1.48
PCDH9-205ENST00000614931 INSP01308 110 aa5.83□□□□□ -1.48
PCDH9-205ENST00000614931 PFN1P07737 140 aaKnown RBP5.83□□□□□ -1.48
PCDH9-205ENST00000614931 GZMBP10144 247 aa5.83□□□□□ -1.48
PCDH9-205ENST00000614931 S100A1P23297 94 aa5.83□□□□□ -1.48
PCDH9-205ENST00000614931 ERVFC1-1P60608 527 aa5.83□□□□□ -1.48
PCDH9-205ENST00000614931 ANXA2RQ3ZCQ2 193 aa5.83□□□□□ -1.48
PCDH9-205ENST00000614931 LINC01559Q495D7 138 aa5.83□□□□□ -1.48
PCDH9-205ENST00000614931 MORN3Q6PF18 240 aaPredicted RBP5.83□□□□□ -1.48
PCDH9-205ENST00000614931 SVBPQ8N300 66 aa5.83□□□□□ -1.48
PCDH9-205ENST00000614931 OR2D3Q8NGH3 330 aa5.83□□□□□ -1.48
PCDH9-205ENST00000614931 OR10G8Q8NGN5 311 aa5.83□□□□□ -1.48
PCDH9-205ENST00000614931 RCHY1Q96PM5 261 aa5.83□□□□□ -1.48
PCDH9-205ENST00000614931 TM2D3Q9BRN9 247 aa5.83□□□□□ -1.48
PCDH9-205ENST00000614931 CSTL1Q9H114 145 aa5.83□□□□□ -1.48
PCDH9-205ENST00000614931 RPP21Q9H633 154 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms