RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 TMEM170BQ5T4T1 132 aa9.28□□□□□ -0.92
CDH5-208ENST00000614547 ZNF815PA8K554 130 aa9.28□□□□□ -0.92
CDH5-208ENST00000614547 ATP5LO75964 103 aa9.28□□□□□ -0.92
CDH5-208ENST00000614547 APOBEC3AP31941 199 aaPredicted RBP9.28□□□□□ -0.92
CDH5-208ENST00000614547 RPS20P60866 119 aaKnown RBP9.28□□□□□ -0.92
CDH5-208ENST00000614547 NDPQ00604 133 aa9.28□□□□□ -0.92
CDH5-208ENST00000614547 TMEM30BQ3MIR4 351 aa9.28□□□□□ -0.92
CDH5-208ENST00000614547 SIGLEC15Q6ZMC9 328 aa9.28□□□□□ -0.92
CDH5-208ENST00000614547 NEGR1Q7Z3B1 354 aa9.28□□□□□ -0.92
CDH5-208ENST00000614547 RNASE6Q93091 150 aaKnown RBP9.28□□□□□ -0.92
CDH5-208ENST00000614547 C16orf92Q96LL3 132 aa9.28□□□□□ -0.92
CDH5-208ENST00000614547 C7orf69Q9H7B7 122 aa9.28□□□□□ -0.92
CDH5-208ENST00000614547 FLNBO75369 2602 aaKnown RBP9.28□□□□□ -0.92
CDH5-208ENST00000614547 NAV2Q8IVL1 2488 aa9.28□□□□□ -0.92
CDH5-208ENST00000614547 IGHV3OR16-10A0A075B7F0 116 aa9.27□□□□□ -0.92
CDH5-208ENST00000614547 HOXA3O43365 443 aaPredicted RBP9.27□□□□□ -0.92
CDH5-208ENST00000614547 DLX6P56179 175 aa9.27□□□□□ -0.92
CDH5-208ENST00000614547 LY6DQ14210 128 aa9.27□□□□□ -0.92
CDH5-208ENST00000614547 NXT2Q9NPJ8 142 aaKnown RBP9.27□□□□□ -0.92
CDH5-208ENST00000614547 IGLV3-9A0A075B6K5 115 aa9.27□□□□□ -0.93
CDH5-208ENST00000614547 IGLV2-23P01705 113 aa9.27□□□□□ -0.93
CDH5-208ENST00000614547 CD3EP07766 207 aa9.27□□□□□ -0.93
CDH5-208ENST00000614547 CLEC19AQ6UXS0 136 aa9.27□□□□□ -0.93
CDH5-208ENST00000614547 C1orf122Q6ZSJ8 110 aa9.27□□□□□ -0.93
CDH5-208ENST00000614547 ZNF491Q8N8L2 437 aa9.27□□□□□ -0.93
CDH5-208ENST00000614547 SYT8Q8NBV8 401 aa9.27□□□□□ -0.93
CDH5-208ENST00000614547 PRR25Q96S07 402 aa9.27□□□□□ -0.93
CDH5-208ENST00000614547 PTPRBP23467 1997 aa9.27□□□□□ -0.93
CDH5-208ENST00000614547 FAM74A4Q5TZK3 123 aa9.27□□□□□ -0.93
CDH5-208ENST00000614547 CLUHP3Q96NS8 147 aa9.27□□□□□ -0.93
CDH5-208ENST00000614547 PHLDA3Q9Y5J5 127 aa9.27□□□□□ -0.93
CDH5-208ENST00000614547 NBR2O15453 112 aa9.26□□□□□ -0.93
CDH5-208ENST00000614547 SPINK8P0C7L1 97 aa9.26□□□□□ -0.93
CDH5-208ENST00000614547 PRTN3P24158 256 aa9.26□□□□□ -0.93
CDH5-208ENST00000614547 CEACAM3P40198 252 aa9.26□□□□□ -0.93
CDH5-208ENST00000614547 SEM1Q6ZVN7 128 aa9.26□□□□□ -0.93
CDH5-208ENST00000614547 IL17RELQ6ZVW7 336 aa9.26□□□□□ -0.93
CDH5-208ENST00000614547 TIMD4Q96H15 378 aa9.26□□□□□ -0.93
CDH5-208ENST00000614547 IGKV3-20P01619 116 aa9.26□□□□□ -0.93
CDH5-208ENST00000614547 CR1LQ2VPA4 569 aa9.26□□□□□ -0.93
CDH5-208ENST00000614547 PVRIGQ6DKI7 326 aa9.26□□□□□ -0.93
CDH5-208ENST00000614547 LINC01549A6NIU2 74 aa9.26□□□□□ -0.93
CDH5-208ENST00000614547 BUB1B-PAK6H3BSN5 160 aa9.26□□□□□ -0.93
CDH5-208ENST00000614547 PRSS2P07478 247 aa9.26□□□□□ -0.93
CDH5-208ENST00000614547 MYCNOSP40205 109 aa9.26□□□□□ -0.93
CDH5-208ENST00000614547 C12orf74Q32Q52 190 aa9.26□□□□□ -0.93
CDH5-208ENST00000614547 CEND1Q8N111 149 aa9.25□□□□□ -0.93
CDH5-208ENST00000614547 PTH2Q96A98 100 aa9.25□□□□□ -0.93
CDH5-208ENST00000614547 DPM3Q9P2X0 92 aa9.25□□□□□ -0.93
CDH5-208ENST00000614547 MTORP42345 2549 aa9.25□□□□□ -0.93
CDH5-208ENST00000614547 INSL3P51460 131 aa9.25□□□□□ -0.93
CDH5-208ENST00000614547 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.25□□□□□ -0.93
CDH5-208ENST00000614547 DTX2Q86UW9 622 aa9.25□□□□□ -0.93
CDH5-208ENST00000614547 ATP6V0BQ99437 205 aa9.25□□□□□ -0.93
CDH5-208ENST00000614547 RAB1BQ9H0U4 201 aa9.25□□□□□ -0.93
CDH5-208ENST00000614547 CHTOPQ9Y3Y2 248 aaKnown RBP9.25□□□□□ -0.93
CDH5-208ENST00000614547 FAM215AQ9Y5M1 114 aa9.25□□□□□ -0.93
CDH5-208ENST00000614547 IGLL5B9A064 214 aa9.25□□□□□ -0.93
CDH5-208ENST00000614547 GATA4P43694 442 aa9.25□□□□□ -0.93
CDH5-208ENST00000614547 ZNF80P51504 273 aaPredicted RBP9.25□□□□□ -0.93
CDH5-208ENST00000614547 SPRY4Q9C004 299 aa9.25□□□□□ -0.93
CDH5-208ENST00000614547 GEMIN7Q9H840 131 aaKnown RBP9.25□□□□□ -0.93
CDH5-208ENST00000614547 HLA-DRB4P13762 266 aa9.24□□□□□ -0.93
CDH5-208ENST00000614547 LAGE3Q14657 143 aa9.24□□□□□ -0.93
CDH5-208ENST00000614547 C14orf178Q8N769 122 aaPredicted RBP9.24□□□□□ -0.93
CDH5-208ENST00000614547 C20orf78Q9BR46 151 aa9.24□□□□□ -0.93
CDH5-208ENST00000614547 HLA-DRB4X5D2U9 266 aa9.24□□□□□ -0.93
CDH5-208ENST00000614547 TRGV3P03979 118 aa9.24□□□□□ -0.93
CDH5-208ENST00000614547 FGF6P10767 208 aa9.24□□□□□ -0.93
CDH5-208ENST00000614547 TMEM155Q4W5P6 130 aa9.24□□□□□ -0.93
CDH5-208ENST00000614547 JMJD1CQ15652 2540 aa9.24□□□□□ -0.93
CDH5-208ENST00000614547 H3BRN7 92 aa9.24□□□□□ -0.93
CDH5-208ENST00000614547 SRD5A1P18405 259 aa9.24□□□□□ -0.93
CDH5-208ENST00000614547 FLNCQ14315 2725 aa9.24□□□□□ -0.93
CDH5-208ENST00000614547 MBD3L4A6NDZ8 208 aaPredicted RBP9.23□□□□□ -0.93
CDH5-208ENST00000614547 MBD3L3A6NE82 208 aaPredicted RBP9.23□□□□□ -0.93
CDH5-208ENST00000614547 MBD3L5A6NJ08 208 aaPredicted RBP9.23□□□□□ -0.93
CDH5-208ENST00000614547 PRAC2D3DTV9 90 aa9.23□□□□□ -0.93
CDH5-208ENST00000614547 IGLV2-11P01706 119 aa9.23□□□□□ -0.93
CDH5-208ENST00000614547 MBD3L2Q8NHZ7 208 aaPredicted RBP9.23□□□□□ -0.93
CDH5-208ENST00000614547 RAX2Q96IS3 184 aa9.23□□□□□ -0.93
CDH5-208ENST00000614547 SPAG8Q99932 426 aaPredicted RBP9.23□□□□□ -0.93
CDH5-208ENST00000614547 UBTD1Q9HAC8 227 aa9.23□□□□□ -0.93
CDH5-208ENST00000614547 WNK1Q9H4A3 2382 aa9.23□□□□□ -0.93
CDH5-208ENST00000614547 ADAMTS20P59510 1910 aa9.23□□□□□ -0.93
CDH5-208ENST00000614547 SPENQ96T58 3664 aaKnown RBP9.23□□□□□ -0.93
CDH5-208ENST00000614547 TMEM238LA0A1B0GVL6 79 aa9.23□□□□□ -0.93
CDH5-208ENST00000614547 A6NJY4 79 aa9.23□□□□□ -0.93
CDH5-208ENST00000614547 TRAV26-1A0A087WT03 109 aa9.23□□□□□ -0.93
CDH5-208ENST00000614547 K7EIM0 57 aa9.23□□□□□ -0.93
CDH5-208ENST00000614547 DYNAPQ8N1N2 210 aa9.23□□□□□ -0.93
CDH5-208ENST00000614547 ACANP16112 2415 aa9.23□□□□□ -0.93
CDH5-208ENST00000614547 CRYBG3Q68DQ2 2970 aa9.22□□□□□ -0.93
CDH5-208ENST00000614547 SLC25A16P16260 332 aa9.22□□□□□ -0.93
CDH5-208ENST00000614547 SRSF1Q07955 248 aaKnown RBP eCLIP9.22□□□□□ -0.93
CDH5-208ENST00000614547 MAPKAPK5-AS1Q8N8E1 139 aa9.22□□□□□ -0.93
CDH5-208ENST00000614547 TNFRSF14Q92956 283 aa9.22□□□□□ -0.93
CDH5-208ENST00000614547 ZNF256Q9Y2P7 627 aaPredicted RBP9.22□□□□□ -0.93
CDH5-208ENST00000614547 TRAV8-2A0A0B4J237 113 aa9.22□□□□□ -0.93
CDH5-208ENST00000614547 I3L2K1 104 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms